Gene annotation
Transcriptome id Sobic.002G317700.1
Synonym Sb02g034675
Functional annotation BNR/Asp-box repeat family protein, putative, expressed
UniProt A0A1B6QEH7
Pfam PF13088
Panther DB PTHR33307 PTHR33307:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57700 : BNR/Asp-box repeat family protein
RAP-DB (Rice) LOC_Os07g33220.1 : BNR/Asp-box repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a014776 , Zm00025a014774
Brachypodium PNT75017
Barley HORVU2Hr1G046590.23 , HORVU2Hr1G046590.22 , HORVU2Hr1G046590.21 , HORVU2Hr1G046590.20 , HORVU2Hr1G046590.25 , HORVU2Hr1G046590.24 , HORVU2Hr1G046590.9 , HORVU2Hr1G046590.8 , HORVU2Hr1G046590.1 , HORVU2Hr1G046590.4 , HORVU2Hr1G046590.5 , HORVU2Hr1G046590.6 , HORVU2Hr1G046590.7 , HORVU2Hr1G046590.12 , HORVU2Hr1G046590.13 , HORVU2Hr1G046590.10 , HORVU2Hr1G046590.11 , HORVU2Hr1G046590.16 , HORVU2Hr1G046590.17 , HORVU2Hr1G046590.14 , HORVU2Hr1G046590.15 , HORVU2Hr1G046590.18 , HORVU2Hr1G046590.19 , HORVU2Hr1G046590.2 , HORVU2Hr1G046590.3
Wheat TraesCS2A02G222800 , TraesCS2A02G222800 , TraesCS2A02G222800 , TraesCS2A02G222800 , TraesCS2A02G222800 , TraesCS2B02G248400 , TraesCS2B02G248400 , TraesCS2B02G248400 , TraesCS2D02G228900 , TraesCS2D02G228900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G112000 protein binding protein, putative, expressed -
2 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
3 Sobic.008G070700 leafbladeless1, putative, expressed -
4 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
5 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
6 Sobic.009G202801 - K10406: kinesin family member C2/C3
7 Sobic.006G211900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
8 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.007G188001 - K11844: ubiquitin carboxyl-terminal hydrolase 16/45
10 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
12 Sobic.007G121600 - -
13 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
14 Sobic.006G142500 protein kinase, putative, expressed -
15 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
16 Sobic.007G121650 - -
17 Sobic.003G055600 expressed protein -
18 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
19 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
20 Sobic.004G246500 ATMAP70 protein, putative, expressed -


Gene co-expression network
sample Sobic002G317700 Sobic002G317700 Sobic002G112000 Sobic002G112000 Sobic002G317700--Sobic002G112000 Sobic010G092400 Sobic010G092400 Sobic002G317700--Sobic010G092400 Sobic008G070700 Sobic008G070700 Sobic002G317700--Sobic008G070700 Sobic004G267600 Sobic004G267600 Sobic002G317700--Sobic004G267600 Sobic006G274200 Sobic006G274200 Sobic002G317700--Sobic006G274200 Sobic009G202801 Sobic009G202801 Sobic002G317700--Sobic009G202801 Sobic006G211900 Sobic006G211900 Sobic002G317700--Sobic006G211900 Sobic004G234500 Sobic004G234500 Sobic002G317700--Sobic004G234500 Sobic007G188001 Sobic007G188001 Sobic002G317700--Sobic007G188001 Sobic009G057800 Sobic009G057800 Sobic002G112000--Sobic009G057800 Sobic007G201900 Sobic007G201900 Sobic002G112000--Sobic007G201900 Sobic002G112000--Sobic002G317700 Sobic002G112000--Sobic008G070700 Sobic010G222800 Sobic010G222800 Sobic002G112000--Sobic010G222800 Sobic003G129500 Sobic003G129500 Sobic002G112000--Sobic003G129500 Sobic006G272800 Sobic006G272800 Sobic002G112000--Sobic006G272800 Sobic004G190500 Sobic004G190500 Sobic002G112000--Sobic004G190500 Sobic009G002200 Sobic009G002200 Sobic002G112000--Sobic009G002200 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic005G062600 Sobic005G062600 Sobic010G092400--Sobic005G062600 Sobic003G085900 Sobic003G085900 Sobic010G092400--Sobic003G085900 Sobic007G007800 Sobic007G007800 Sobic010G092400--Sobic007G007800 Sobic009G184200 Sobic009G184200 Sobic010G092400--Sobic009G184200 Sobic010G269700 Sobic010G269700 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic003G387700 Sobic003G387700 Sobic010G092400--Sobic003G387700 Sobic010G092400--Sobic008G070700 Sobic008G070700--Sobic006G272800 Sobic008G070700--Sobic002G112000 Sobic008G070700--Sobic004G267600 Sobic001G439800 Sobic001G439800 Sobic008G070700--Sobic001G439800 Sobic008G070700--Sobic010G222800 Sobic008G070700--Sobic010G092400 Sobic008G070700--Sobic002G317700 Sobic001G175100 Sobic001G175100 Sobic008G070700--Sobic001G175100 Sobic003G393100 Sobic003G393100 Sobic008G070700--Sobic003G393100 Sobic001G493900 Sobic001G493900 Sobic004G267600--Sobic001G493900 Sobic002G284100 Sobic002G284100 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic006G142500 Sobic006G142500 Sobic004G267600--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic004G267600--Sobic002G027600 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic004G267600--Sobic005G062600 Sobic003G019900 Sobic003G019900 Sobic006G274200--Sobic003G019900 Sobic006G274200--Sobic010G269700 Sobic003G002000 Sobic003G002000 Sobic006G274200--Sobic003G002000 Sobic007G209200 Sobic007G209200 Sobic006G274200--Sobic007G209200 Sobic001G101900 Sobic001G101900 Sobic006G274200--Sobic001G101900 Sobic008G151600 Sobic008G151600 Sobic006G274200--Sobic008G151600 Sobic009G146700 Sobic009G146700 Sobic006G274200--Sobic009G146700 Sobic003G338700 Sobic003G338700 Sobic006G274200--Sobic003G338700 Sobic006G274200--Sobic001G493900 Sobic003G292700 Sobic003G292700 Sobic009G202801--Sobic003G292700 Sobic006G193100 Sobic006G193100 Sobic009G202801--Sobic006G193100 Sobic003G031700 Sobic003G031700 Sobic009G202801--Sobic003G031700 Sobic003G315700 Sobic003G315700 Sobic009G202801--Sobic003G315700 Sobic009G202801--Sobic006G142500 Sobic001G008300 Sobic001G008300 Sobic009G202801--Sobic001G008300 Sobic002G074000 Sobic002G074000 Sobic009G202801--Sobic002G074000 Sobic009G202801--Sobic002G317700 Sobic004G246500 Sobic004G246500 Sobic009G202801--Sobic004G246500 Sobic009G099150 Sobic009G099150 Sobic006G211900--Sobic009G099150 Sobic006G211900--Sobic002G317700 Sobic006G211900--Sobic009G057800 Sobic003G041900 Sobic003G041900 Sobic006G211900--Sobic003G041900 Sobic006G211900--Sobic006G142500 Sobic002G279400 Sobic002G279400 Sobic006G211900--Sobic002G279400 Sobic001G054700 Sobic001G054700 Sobic006G211900--Sobic001G054700 Sobic005G153000 Sobic005G153000 Sobic006G211900--Sobic005G153000 Sobic006G211900--Sobic004G234500 Sobic010G023400 Sobic010G023400 Sobic004G234500--Sobic010G023400 Sobic004G234500--Sobic006G142500 Sobic010G086000 Sobic010G086000 Sobic004G234500--Sobic010G086000 Sobic004G234500--Sobic004G246500 Sobic004G234500--Sobic004G267600 Sobic009G127800 Sobic009G127800 Sobic004G234500--Sobic009G127800 Sobic004G234500--Sobic006G274200 Sobic004G234500--Sobic002G027600 Sobic004G234500--Sobic002G317700 Sobic009G143200 Sobic009G143200 Sobic007G188001--Sobic009G143200 Sobic001G377700 Sobic001G377700 Sobic007G188001--Sobic001G377700 Sobic007G188001--Sobic001G054700 Sobic007G188001--Sobic006G142500 Sobic007G188001--Sobic009G184200 Sobic007G188001--Sobic002G317700 Sobic007G188001--Sobic004G267600 Sobic002G021200 Sobic002G021200 Sobic007G188001--Sobic002G021200 Sobic005G157300 Sobic005G157300 Sobic007G188001--Sobic005G157300
Octagon: transcription factors


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