Gene annotation
Transcriptome id Sobic.008G070700.1
Synonym ATSGS3, Sb08g006220, SGS3
Functional annotation leafbladeless1, putative, expressed
UniProt C5YTI3
Pfam PF03470 PF03468
Panther DB PTHR21596 PTHR21596:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23570 : XS domain-containing protein / XS zinc finger domain-containing protein-related
RAP-DB (Rice) LOC_Os12g09580.1 : leafbladeless1, putative, expressed
MaizeGDB (Corn) Zm00025a023404 , Zm00025a040608 , Zm00025a038032 , Zm00025a025655 , Zm00025a022214
Brachypodium KQJ91911
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G070700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
2 Sobic.002G112000 protein binding protein, putative, expressed -
3 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
4 Sobic.001G439800 Subtilisin-like serine protease 2("PubMedID : 26759170,PubMedID : 24597475")@OsSub28 - Putative Subtilisin homologue, expressed -
5 Sobic.010G222800 expressed protein -
6 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
8 Sobic.001G175100 DEK C terminal domain containing protein, expressed -
9 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
10 Sobic.003G072500 transcription factor X1, putative, expressed -
11 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
12 Sobic.001G158300 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
13 Sobic.007G087800 expressed protein K06085: SSX2IP, synovial sarcoma, X breakpoint 2 interacting protein
14 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
15 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
16 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
17 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
18 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
19 Sobic.001G493900 beta-galactosidase, putative, expressed -
20 Sobic.009G202801 - K10406: kinesin family member C2/C3


Gene co-expression network
sample Sobic008G070700 Sobic008G070700 Sobic006G272800 Sobic006G272800 Sobic008G070700--Sobic006G272800 Sobic002G112000 Sobic002G112000 Sobic008G070700--Sobic002G112000 Sobic004G267600 Sobic004G267600 Sobic008G070700--Sobic004G267600 Sobic001G439800 Sobic001G439800 Sobic008G070700--Sobic001G439800 Sobic010G222800 Sobic010G222800 Sobic008G070700--Sobic010G222800 Sobic010G092400 Sobic010G092400 Sobic008G070700--Sobic010G092400 Sobic002G317700 Sobic002G317700 Sobic008G070700--Sobic002G317700 Sobic001G175100 Sobic001G175100 Sobic008G070700--Sobic001G175100 Sobic003G393100 Sobic003G393100 Sobic008G070700--Sobic003G393100 Sobic002G284100 Sobic002G284100 Sobic006G272800--Sobic002G284100 Sobic002G027600 Sobic002G027600 Sobic006G272800--Sobic002G027600 Sobic006G272800--Sobic004G267600 Sobic006G272800--Sobic008G070700 Sobic005G032600 Sobic005G032600 Sobic006G272800--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic006G272800--Sobic001G468000 Sobic002G006100 Sobic002G006100 Sobic006G272800--Sobic002G006100 Sobic006G142500 Sobic006G142500 Sobic006G272800--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic006G272800--Sobic001G158300 Sobic009G057800 Sobic009G057800 Sobic002G112000--Sobic009G057800 Sobic007G201900 Sobic007G201900 Sobic002G112000--Sobic007G201900 Sobic002G112000--Sobic002G317700 Sobic002G112000--Sobic008G070700 Sobic002G112000--Sobic010G222800 Sobic003G129500 Sobic003G129500 Sobic002G112000--Sobic003G129500 Sobic002G112000--Sobic006G272800 Sobic004G190500 Sobic004G190500 Sobic002G112000--Sobic004G190500 Sobic009G002200 Sobic009G002200 Sobic002G112000--Sobic009G002200 Sobic001G493900 Sobic001G493900 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic004G267600--Sobic006G142500 Sobic004G267600--Sobic002G027600 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic001G439800--Sobic008G070700 Sobic001G439800--Sobic001G493900 Sobic006G163300 Sobic006G163300 Sobic001G439800--Sobic006G163300 Sobic003G019900 Sobic003G019900 Sobic001G439800--Sobic003G019900 Sobic007G147200 Sobic007G147200 Sobic001G439800--Sobic007G147200 Sobic001G439800--Sobic006G272800 Sobic001G439800--Sobic005G062600 Sobic001G439800--Sobic004G267600 Sobic001G379900 Sobic001G379900 Sobic001G439800--Sobic001G379900 Sobic003G343200 Sobic003G343200 Sobic010G222800--Sobic003G343200 Sobic010G024000 Sobic010G024000 Sobic010G222800--Sobic010G024000 Sobic003G411700 Sobic003G411700 Sobic010G222800--Sobic003G411700 Sobic010G222800--Sobic002G112000 Sobic010G222800--Sobic008G070700 Sobic002G271400 Sobic002G271400 Sobic010G222800--Sobic002G271400 Sobic007G076200 Sobic007G076200 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic008G131900 Sobic008G131900 Sobic010G222800--Sobic008G131900 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic010G092400--Sobic005G062600 Sobic003G085900 Sobic003G085900 Sobic010G092400--Sobic003G085900 Sobic007G007800 Sobic007G007800 Sobic010G092400--Sobic007G007800 Sobic009G184200 Sobic009G184200 Sobic010G092400--Sobic009G184200 Sobic010G269700 Sobic010G269700 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic003G387700 Sobic003G387700 Sobic010G092400--Sobic003G387700 Sobic010G092400--Sobic008G070700 Sobic002G317700--Sobic002G112000 Sobic002G317700--Sobic010G092400 Sobic002G317700--Sobic008G070700 Sobic002G317700--Sobic004G267600 Sobic006G274200 Sobic006G274200 Sobic002G317700--Sobic006G274200 Sobic009G202801 Sobic009G202801 Sobic002G317700--Sobic009G202801 Sobic006G211900 Sobic006G211900 Sobic002G317700--Sobic006G211900 Sobic004G234500 Sobic004G234500 Sobic002G317700--Sobic004G234500 Sobic007G188001 Sobic007G188001 Sobic002G317700--Sobic007G188001 Sobic001G175100--Sobic008G070700 Sobic004G003700 Sobic004G003700 Sobic001G175100--Sobic004G003700 Sobic004G198100 Sobic004G198100 Sobic001G175100--Sobic004G198100 Sobic006G221800 Sobic006G221800 Sobic001G175100--Sobic006G221800 Sobic001G101700 Sobic001G101700 Sobic001G175100--Sobic001G101700 Sobic008G088800 Sobic008G088800 Sobic001G175100--Sobic008G088800 Sobic001G175100--Sobic007G147200 Sobic001G143400 Sobic001G143400 Sobic001G175100--Sobic001G143400 Sobic008G138000 Sobic008G138000 Sobic001G175100--Sobic008G138000 Sobic003G393100--Sobic009G184200 Sobic002G204400 Sobic002G204400 Sobic003G393100--Sobic002G204400 Sobic003G369200 Sobic003G369200 Sobic003G393100--Sobic003G369200 Sobic001G398400 Sobic001G398400 Sobic003G393100--Sobic001G398400 Sobic008G148000 Sobic008G148000 Sobic003G393100--Sobic008G148000 Sobic006G281400 Sobic006G281400 Sobic003G393100--Sobic006G281400 Sobic003G393100--Sobic008G070700 Sobic003G393100--Sobic007G007800 Sobic004G321400 Sobic004G321400 Sobic003G393100--Sobic004G321400
Octagon: transcription factors


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