Gene annotation
Transcriptome id Sobic.006G211900.1,Sobic.006G211900.3,Sobic.006G211900.2
Synonym Sb06g028240, ATCAD9, CAD9, SbCAD7;SbCAD7
Functional annotation Cinnamyl alcohol dehydrogenase (PubMedID : 28606901)
Cinnamyl alcohol dehydrogenase (PubMedID : 19087955)
dehydrogenase, putative, expressed
UniProt A0A1Z5RFF2 , A0A1Z5REY9 , C5YFP2
Pfam PF08240 PF00107 PF00107 PF08240
Panther DB PTHR11695 PTHR11695:SF497
NCBI CDD KOG0023; Alcohol dehydrogenase, class V
KEGG Orthology K00083; cinnamyl-alcohol dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G39330 : cinnamyl alcohol dehydrogenase 6,cinnamyl alcohol dehydrogenase 9
RAP-DB (Rice) LOC_Os04g52280.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a009822
Brachypodium -
Barley HORVU6Hr1G087220.3 , HORVU6Hr1G087220.5 , HORVU6Hr1G087220.4 , HORVU6Hr1G087220.1 , HORVU6Hr1G087220.2 , HORVU2Hr1G099350.6 , HORVU2Hr1G099350.7 , HORVU2Hr1G099350.4 , HORVU2Hr1G099350.5 , HORVU2Hr1G099350.8 , HORVU2Hr1G099350.9
Wheat TraesCS2B02G444200 , TraesCS2D02G422400 , TraesCS6B02G406000 , TraesCS7A02G183000 , TraesCS2A02G424600 , TraesCS7D02G184500
Populus -


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cDNA sequences
Sobic.006G211900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G099150 - -
2 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
3 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
4 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
5 Sobic.006G142500 protein kinase, putative, expressed -
6 Sobic.002G279400 DUF630/DUF632 domains containing protein, putative, expressed -
7 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
8 Sobic.005G153000 agenet domain containing protein, expressed -
9 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
10 Sobic.008G151600 PMR5, putative, expressed -
11 Sobic.002G112000 protein binding protein, putative, expressed -
12 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
13 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
14 Sobic.005G163400 dnaJ domain containing protein, expressed -
15 Sobic.009G047000 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
16 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
17 Sobic.010G023400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
18 Sobic.001G390400 expressed protein -
19 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
20 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic006G211900 Sobic006G211900 Sobic009G099150 Sobic009G099150 Sobic006G211900--Sobic009G099150 Sobic002G317700 Sobic002G317700 Sobic006G211900--Sobic002G317700 Sobic009G057800 Sobic009G057800 Sobic006G211900--Sobic009G057800 Sobic003G041900 Sobic003G041900 Sobic006G211900--Sobic003G041900 Sobic006G142500 Sobic006G142500 Sobic006G211900--Sobic006G142500 Sobic002G279400 Sobic002G279400 Sobic006G211900--Sobic002G279400 Sobic001G054700 Sobic001G054700 Sobic006G211900--Sobic001G054700 Sobic005G153000 Sobic005G153000 Sobic006G211900--Sobic005G153000 Sobic004G234500 Sobic004G234500 Sobic006G211900--Sobic004G234500 Sobic009G099150--Sobic006G211900 Sobic003G031700 Sobic003G031700 Sobic009G099150--Sobic003G031700 Sobic001G522300 Sobic001G522300 Sobic009G099150--Sobic001G522300 Sobic007G087800 Sobic007G087800 Sobic009G099150--Sobic007G087800 Sobic010G092400 Sobic010G092400 Sobic009G099150--Sobic010G092400 Sobic009G099150--Sobic002G317700 Sobic010G023400 Sobic010G023400 Sobic009G099150--Sobic010G023400 Sobic007G116800 Sobic007G116800 Sobic009G099150--Sobic007G116800 Sobic009G099150--Sobic004G234500 Sobic002G112000 Sobic002G112000 Sobic002G317700--Sobic002G112000 Sobic002G317700--Sobic010G092400 Sobic008G070700 Sobic008G070700 Sobic002G317700--Sobic008G070700 Sobic004G267600 Sobic004G267600 Sobic002G317700--Sobic004G267600 Sobic006G274200 Sobic006G274200 Sobic002G317700--Sobic006G274200 Sobic009G202801 Sobic009G202801 Sobic002G317700--Sobic009G202801 Sobic002G317700--Sobic006G211900 Sobic002G317700--Sobic004G234500 Sobic007G188001 Sobic007G188001 Sobic002G317700--Sobic007G188001 Sobic007G201900 Sobic007G201900 Sobic009G057800--Sobic007G201900 Sobic009G057800--Sobic002G112000 Sobic001G101700 Sobic001G101700 Sobic009G057800--Sobic001G101700 Sobic009G057800--Sobic002G279400 Sobic008G151600 Sobic008G151600 Sobic009G057800--Sobic008G151600 Sobic007G209200 Sobic007G209200 Sobic009G057800--Sobic007G209200 Sobic010G255000 Sobic010G255000 Sobic009G057800--Sobic010G255000 Sobic009G143200 Sobic009G143200 Sobic009G057800--Sobic009G143200 Sobic003G282500 Sobic003G282500 Sobic009G057800--Sobic003G282500 Sobic004G164700 Sobic004G164700 Sobic003G041900--Sobic004G164700 Sobic003G041900--Sobic010G023400 Sobic010G192500 Sobic010G192500 Sobic003G041900--Sobic010G192500 Sobic006G241800 Sobic006G241800 Sobic003G041900--Sobic006G241800 Sobic010G086000 Sobic010G086000 Sobic003G041900--Sobic010G086000 Sobic008G190000 Sobic008G190000 Sobic003G041900--Sobic008G190000 Sobic004G317200 Sobic004G317200 Sobic003G041900--Sobic004G317200 Sobic003G041900--Sobic006G142500 Sobic003G041900--Sobic006G211900 Sobic006G142500--Sobic010G086000 Sobic006G142500--Sobic004G267600 Sobic006G142500--Sobic010G192500 Sobic009G225500 Sobic009G225500 Sobic006G142500--Sobic009G225500 Sobic003G032200 Sobic003G032200 Sobic006G142500--Sobic003G032200 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic002G279400--Sobic007G201900 Sobic002G279400--Sobic009G057800 Sobic002G279400--Sobic009G127800 Sobic006G221300 Sobic006G221300 Sobic002G279400--Sobic006G221300 Sobic002G279400--Sobic005G153000 Sobic002G279400--Sobic001G101700 Sobic009G188500 Sobic009G188500 Sobic002G279400--Sobic009G188500 Sobic002G279400--Sobic001G054700 Sobic009G208300 Sobic009G208300 Sobic002G279400--Sobic009G208300 Sobic001G054700--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic001G054700--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic001G054700--Sobic004G108400 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic001G054700--Sobic009G127800 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic005G153000--Sobic009G077300 Sobic002G168000 Sobic002G168000 Sobic005G153000--Sobic002G168000 Sobic004G282601 Sobic004G282601 Sobic005G153000--Sobic004G282601 Sobic010G037901 Sobic010G037901 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic007G187700 Sobic007G187700 Sobic005G153000--Sobic007G187700 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600 Sobic004G234500--Sobic010G023400 Sobic004G234500--Sobic006G142500 Sobic004G234500--Sobic010G086000 Sobic004G246500 Sobic004G246500 Sobic004G234500--Sobic004G246500 Sobic004G234500--Sobic004G267600 Sobic004G234500--Sobic009G127800 Sobic004G234500--Sobic006G274200 Sobic002G027600 Sobic002G027600 Sobic004G234500--Sobic002G027600 Sobic004G234500--Sobic002G317700
Octagon: transcription factors


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