Gene annotation
Transcriptome id Sobic.009G057800.1,Sobic.009G057800.2
Synonym Sb09g004883
Functional annotation kelch repeat-containing protein, putative, expressed
UniProt A0A1B6P6U0
Pfam PF10539 PF01344
Panther DB PTHR24412 PTHR24412:SF228
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G01660 : -
RAP-DB (Rice) LOC_Os01g07140.2 : kelch repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042909 , Zm00025a035680 , Zm00025a042916
Brachypodium -
Barley HORVU1Hr1G024460.18 , HORVU1Hr1G024460.13 , HORVU1Hr1G024460.12 , HORVU1Hr1G024460.11 , HORVU1Hr1G024460.10 , HORVU1Hr1G024460.17 , HORVU1Hr1G024460.16 , HORVU1Hr1G024460.15 , HORVU1Hr1G024460.14 , HORVU1Hr1G024460.9 , HORVU1Hr1G024460.8 , HORVU1Hr1G024460.2 , HORVU1Hr1G024460.1 , HORVU1Hr1G024460.7 , HORVU1Hr1G024460.6 , HORVU1Hr1G024460.5 , HORVU1Hr1G024460.4 , HORVU1Hr1G024460.3 , HORVU3Hr1G017930.24 , HORVU3Hr1G017930.21 , HORVU3Hr1G017930.22 , HORVU3Hr1G017930.23 , HORVU3Hr1G017930.19 , HORVU1Hr1G024460.22 , HORVU1Hr1G024460.20 , HORVU1Hr1G024460.21 , HORVU3Hr1G017930.7 , HORVU3Hr1G017930.6 , HORVU3Hr1G017930.1 , HORVU3Hr1G017930.3 , HORVU3Hr1G017930.2 , HORVU3Hr1G017930.8 , HORVU3Hr1G017930.11 , HORVU3Hr1G017930.10 , HORVU3Hr1G017930.12 , HORVU3Hr1G017930.14 , HORVU3Hr1G017930.17 , HORVU3Hr1G017930.16 , HORVU3Hr1G017930.18
Wheat TraesCS1D02G112800 , TraesCS3B02G115100 , TraesCS1B02G131600 , TraesCS3A02G098900 , TraesCS3A02G098900 , TraesCS3D02G099300 , TraesCS1A02G111300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G201900 expressed protein -
2 Sobic.002G112000 protein binding protein, putative, expressed -
3 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
4 Sobic.002G279400 DUF630/DUF632 domains containing protein, putative, expressed -
5 Sobic.008G151600 PMR5, putative, expressed -
6 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
7 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
8 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
9 Sobic.003G282500 keratin, type I cytoskeletal 9, putative, expressed -
10 Sobic.005G153000 agenet domain containing protein, expressed -
11 Sobic.003G002000 expressed protein -
12 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
13 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
14 Sobic.008G138000 XH domain containing protein, expressed -
15 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
16 Sobic.006G211900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
17 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
18 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
19 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
20 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G057800 Sobic009G057800 Sobic007G201900 Sobic007G201900 Sobic009G057800--Sobic007G201900 Sobic002G112000 Sobic002G112000 Sobic009G057800--Sobic002G112000 Sobic001G101700 Sobic001G101700 Sobic009G057800--Sobic001G101700 Sobic002G279400 Sobic002G279400 Sobic009G057800--Sobic002G279400 Sobic008G151600 Sobic008G151600 Sobic009G057800--Sobic008G151600 Sobic007G209200 Sobic007G209200 Sobic009G057800--Sobic007G209200 Sobic010G255000 Sobic010G255000 Sobic009G057800--Sobic010G255000 Sobic009G143200 Sobic009G143200 Sobic009G057800--Sobic009G143200 Sobic003G282500 Sobic003G282500 Sobic009G057800--Sobic003G282500 Sobic007G201900--Sobic009G057800 Sobic007G201900--Sobic001G101700 Sobic007G201900--Sobic010G255000 Sobic007G201900--Sobic002G112000 Sobic007G201900--Sobic002G279400 Sobic001G101900 Sobic001G101900 Sobic007G201900--Sobic001G101900 Sobic003G244000 Sobic003G244000 Sobic007G201900--Sobic003G244000 Sobic007G201900--Sobic009G143200 Sobic007G147200 Sobic007G147200 Sobic007G201900--Sobic007G147200 Sobic002G112000--Sobic009G057800 Sobic002G112000--Sobic007G201900 Sobic002G317700 Sobic002G317700 Sobic002G112000--Sobic002G317700 Sobic008G070700 Sobic008G070700 Sobic002G112000--Sobic008G070700 Sobic010G222800 Sobic010G222800 Sobic002G112000--Sobic010G222800 Sobic003G129500 Sobic003G129500 Sobic002G112000--Sobic003G129500 Sobic006G272800 Sobic006G272800 Sobic002G112000--Sobic006G272800 Sobic004G190500 Sobic004G190500 Sobic002G112000--Sobic004G190500 Sobic009G002200 Sobic009G002200 Sobic002G112000--Sobic009G002200 Sobic006G221800 Sobic006G221800 Sobic001G101700--Sobic006G221800 Sobic001G101700--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic001G101700--Sobic004G003700 Sobic001G101700--Sobic007G147200 Sobic001G101700--Sobic007G201900 Sobic001G101700--Sobic007G209200 Sobic001G101700--Sobic008G151600 Sobic001G101700--Sobic009G057800 Sobic001G143400 Sobic001G143400 Sobic001G101700--Sobic001G143400 Sobic002G279400--Sobic007G201900 Sobic002G279400--Sobic009G057800 Sobic009G127800 Sobic009G127800 Sobic002G279400--Sobic009G127800 Sobic006G221300 Sobic006G221300 Sobic002G279400--Sobic006G221300 Sobic005G153000 Sobic005G153000 Sobic002G279400--Sobic005G153000 Sobic002G279400--Sobic001G101700 Sobic009G188500 Sobic009G188500 Sobic002G279400--Sobic009G188500 Sobic001G054700 Sobic001G054700 Sobic002G279400--Sobic001G054700 Sobic009G208300 Sobic009G208300 Sobic002G279400--Sobic009G208300 Sobic003G019900 Sobic003G019900 Sobic008G151600--Sobic003G019900 Sobic008G151600--Sobic006G221800 Sobic006G274200 Sobic006G274200 Sobic008G151600--Sobic006G274200 Sobic001G493900 Sobic001G493900 Sobic008G151600--Sobic001G493900 Sobic008G151600--Sobic001G101700 Sobic010G077000 Sobic010G077000 Sobic008G151600--Sobic010G077000 Sobic007G161600 Sobic007G161600 Sobic008G151600--Sobic007G161600 Sobic005G032600 Sobic005G032600 Sobic008G151600--Sobic005G032600 Sobic008G151600--Sobic007G147200 Sobic008G138000 Sobic008G138000 Sobic007G209200--Sobic008G138000 Sobic007G209200--Sobic004G003700 Sobic003G002000 Sobic003G002000 Sobic007G209200--Sobic003G002000 Sobic001G496400 Sobic001G496400 Sobic007G209200--Sobic001G496400 Sobic007G209200--Sobic006G274200 Sobic007G209200--Sobic009G208300 Sobic007G209200--Sobic001G143400 Sobic007G209200--Sobic001G101700 Sobic007G209200--Sobic007G147200 Sobic010G255000--Sobic007G147200 Sobic010G255000--Sobic001G101700 Sobic010G255000--Sobic007G201900 Sobic003G046400 Sobic003G046400 Sobic010G255000--Sobic003G046400 Sobic002G255600 Sobic002G255600 Sobic010G255000--Sobic002G255600 Sobic007G137101 Sobic007G137101 Sobic010G255000--Sobic007G137101 Sobic001G106500 Sobic001G106500 Sobic010G255000--Sobic001G106500 Sobic007G121200 Sobic007G121200 Sobic010G255000--Sobic007G121200 Sobic010G220800 Sobic010G220800 Sobic010G255000--Sobic010G220800 Sobic005G157300 Sobic005G157300 Sobic009G143200--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic009G143200--Sobic004G317000 Sobic009G143200--Sobic001G054700 Sobic003G055600 Sobic003G055600 Sobic009G143200--Sobic003G055600 Sobic009G143200--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic009G143200--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic009G143200--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic009G143200--Sobic004G052200 Sobic007G187700 Sobic007G187700 Sobic009G143200--Sobic007G187700 Sobic003G282500--Sobic009G057800 Sobic003G282500--Sobic004G317000 Sobic003G282500--Sobic007G201900 Sobic003G129200 Sobic003G129200 Sobic003G282500--Sobic003G129200 Sobic005G196600 Sobic005G196600 Sobic003G282500--Sobic005G196600 Sobic003G282500--Sobic010G255000 Sobic004G282601 Sobic004G282601 Sobic003G282500--Sobic004G282601 Sobic003G250100 Sobic003G250100 Sobic003G282500--Sobic003G250100 Sobic003G282500--Sobic009G143200
Octagon: transcription factors


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