Gene annotation
Transcriptome id Sobic.003G002000.1
Synonym Sb03g000345
Functional annotation expressed protein
UniProt A0A1B6Q0J8
Pfam PF07762
Panther DB PTHR33086 PTHR33086:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g14180.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK03890 , KQK17061
Barley HORVU3Hr1G018370.1 , HORVU3Hr1G018160.4 , HORVU3Hr1G018160.3 , HORVU3Hr1G018160.2 , HORVU3Hr1G018160.1
Wheat TraesCS3B02G118400 , TraesCS3A02G101000 , TraesCS3D02G102400 , TraesCS3B02G118500 , TraesCS3A02G162200 , TraesCS3A02G167900 , TraesCS3B02G193600 , TraesCS3A02G162400 , TraesCS3B02G193300 , TraesCS2D02G214400 , TraesCS3B02G198400 , TraesCS3D02G174100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
2 Sobic.007G209200 CUP-SHAPED COTYLEDON3, putative, expressed -
3 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
4 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
6 Sobic.001G101900 SCP-like extracellular protein, expressed -
7 Sobic.008G138000 XH domain containing protein, expressed -
8 Sobic.010G269700 expressed protein -
9 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
10 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
11 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
12 Sobic.002G360600 expressed protein -
13 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
15 Sobic.008G151600 PMR5, putative, expressed -
16 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
17 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.008G070700 leafbladeless1, putative, expressed -
19 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
20 Sobic.003G084100 expressed protein -


Gene co-expression network
sample Sobic003G002000 Sobic003G002000 Sobic006G274200 Sobic006G274200 Sobic003G002000--Sobic006G274200 Sobic007G209200 Sobic007G209200 Sobic003G002000--Sobic007G209200 Sobic006G163300 Sobic006G163300 Sobic003G002000--Sobic006G163300 Sobic003G019900 Sobic003G019900 Sobic003G002000--Sobic003G019900 Sobic003G010700 Sobic003G010700 Sobic003G002000--Sobic003G010700 Sobic001G101900 Sobic001G101900 Sobic003G002000--Sobic001G101900 Sobic008G138000 Sobic008G138000 Sobic003G002000--Sobic008G138000 Sobic010G269700 Sobic010G269700 Sobic003G002000--Sobic010G269700 Sobic007G147200 Sobic007G147200 Sobic003G002000--Sobic007G147200 Sobic006G274200--Sobic003G019900 Sobic006G274200--Sobic010G269700 Sobic006G274200--Sobic003G002000 Sobic006G274200--Sobic007G209200 Sobic006G274200--Sobic001G101900 Sobic008G151600 Sobic008G151600 Sobic006G274200--Sobic008G151600 Sobic009G146700 Sobic009G146700 Sobic006G274200--Sobic009G146700 Sobic003G338700 Sobic003G338700 Sobic006G274200--Sobic003G338700 Sobic001G493900 Sobic001G493900 Sobic006G274200--Sobic001G493900 Sobic007G209200--Sobic008G138000 Sobic004G003700 Sobic004G003700 Sobic007G209200--Sobic004G003700 Sobic007G209200--Sobic003G002000 Sobic001G496400 Sobic001G496400 Sobic007G209200--Sobic001G496400 Sobic007G209200--Sobic006G274200 Sobic009G208300 Sobic009G208300 Sobic007G209200--Sobic009G208300 Sobic001G143400 Sobic001G143400 Sobic007G209200--Sobic001G143400 Sobic001G101700 Sobic001G101700 Sobic007G209200--Sobic001G101700 Sobic007G209200--Sobic007G147200 Sobic002G360600 Sobic002G360600 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic003G046400 Sobic003G046400 Sobic006G163300--Sobic003G046400 Sobic006G163300--Sobic003G010700 Sobic010G070900 Sobic010G070900 Sobic006G163300--Sobic010G070900 Sobic006G163300--Sobic007G147200 Sobic007G033700 Sobic007G033700 Sobic006G163300--Sobic007G033700 Sobic006G107500 Sobic006G107500 Sobic006G163300--Sobic006G107500 Sobic006G163300--Sobic001G101900 Sobic003G019900--Sobic006G274200 Sobic003G019900--Sobic001G493900 Sobic003G019900--Sobic003G338700 Sobic003G019900--Sobic008G151600 Sobic003G019900--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic003G019900--Sobic010G014500 Sobic003G019900--Sobic006G163300 Sobic001G074000 Sobic001G074000 Sobic003G019900--Sobic001G074000 Sobic004G267600 Sobic004G267600 Sobic003G019900--Sobic004G267600 Sobic002G363300 Sobic002G363300 Sobic003G010700--Sobic002G363300 Sobic006G273600 Sobic006G273600 Sobic003G010700--Sobic006G273600 Sobic007G170100 Sobic007G170100 Sobic003G010700--Sobic007G170100 Sobic003G010700--Sobic006G163300 Sobic005G199700 Sobic005G199700 Sobic003G010700--Sobic005G199700 Sobic003G010700--Sobic002G360600 Sobic003G010700--Sobic009G146700 Sobic003G010700--Sobic003G338700 Sobic010G276600 Sobic010G276600 Sobic003G010700--Sobic010G276600 Sobic001G101900--Sobic006G163300 Sobic001G101900--Sobic007G147200 Sobic001G101900--Sobic006G274200 Sobic001G101900--Sobic010G070900 Sobic001G101900--Sobic003G019900 Sobic001G101900--Sobic002G360600 Sobic001G101900--Sobic004G003700 Sobic009G087700 Sobic009G087700 Sobic001G101900--Sobic009G087700 Sobic001G101900--Sobic003G002000 Sobic008G138000--Sobic007G209200 Sobic008G138000--Sobic004G003700 Sobic008G138000--Sobic001G143400 Sobic008G138000--Sobic007G147200 Sobic008G138000--Sobic006G163300 Sobic010G168700 Sobic010G168700 Sobic008G138000--Sobic010G168700 Sobic008G138000--Sobic001G101700 Sobic008G138000--Sobic003G002000 Sobic010G077000 Sobic010G077000 Sobic008G138000--Sobic010G077000 Sobic010G269700--Sobic006G274200 Sobic010G269700--Sobic003G019900 Sobic002G222500 Sobic002G222500 Sobic010G269700--Sobic002G222500 Sobic003G373900 Sobic003G373900 Sobic010G269700--Sobic003G373900 Sobic010G092400 Sobic010G092400 Sobic010G269700--Sobic010G092400 Sobic010G086000 Sobic010G086000 Sobic010G269700--Sobic010G086000 Sobic010G269700--Sobic003G002000 Sobic005G020100 Sobic005G020100 Sobic010G269700--Sobic005G020100 Sobic010G241100 Sobic010G241100 Sobic010G269700--Sobic010G241100 Sobic007G147200--Sobic010G070900 Sobic010G255000 Sobic010G255000 Sobic007G147200--Sobic010G255000 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic007G147200--Sobic003G019900 Sobic007G147200--Sobic006G107500 Sobic007G147200--Sobic001G101700
Octagon: transcription factors


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