Gene annotation
Transcriptome id Sobic.003G338700.1
Synonym Sb03g038280
Functional annotation LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5XNA9
Pfam PF00234
Panther DB PTHR33076 PTHR33076:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01870 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os01g60740.1 : LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a027045
Brachypodium KQK10364
Barley HORVU3Hr1G081170.2 , HORVU3Hr1G081170.3 , HORVU3Hr1G081170.1 , HORVU3Hr1G081170.7 , HORVU3Hr1G081170.4
Wheat TraesCS3D02G338300 , TraesCS3D02G338300 , TraesCS3A02G344700
Populus -


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cDNA sequences
Sobic.003G338700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
2 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
3 Sobic.010G014500 aspartic protease, putative, expressed -
4 Sobic.010G014700 expressed protein -
5 Sobic.002G363300 - -
6 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
7 Sobic.007G180200 NC domain-containing protein, putative, expressed -
8 Sobic.001G199400 monocopper oxidase, putative, expressed -
9 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
11 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
12 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
13 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
14 Sobic.006G273600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G493900 beta-galactosidase, putative, expressed -
16 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
17 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.002G360600 expressed protein -
19 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
20 Sobic.001G155700 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic003G338700 Sobic003G338700 Sobic009G146700 Sobic009G146700 Sobic003G338700--Sobic009G146700 Sobic005G199700 Sobic005G199700 Sobic003G338700--Sobic005G199700 Sobic010G014500 Sobic010G014500 Sobic003G338700--Sobic010G014500 Sobic010G014700 Sobic010G014700 Sobic003G338700--Sobic010G014700 Sobic002G363300 Sobic002G363300 Sobic003G338700--Sobic002G363300 Sobic001G286700 Sobic001G286700 Sobic003G338700--Sobic001G286700 Sobic007G180200 Sobic007G180200 Sobic003G338700--Sobic007G180200 Sobic001G199400 Sobic001G199400 Sobic003G338700--Sobic001G199400 Sobic003G019900 Sobic003G019900 Sobic003G338700--Sobic003G019900 Sobic009G146700--Sobic005G199700 Sobic009G146700--Sobic003G338700 Sobic009G146700--Sobic002G363300 Sobic009G146700--Sobic010G014700 Sobic003G010700 Sobic003G010700 Sobic009G146700--Sobic003G010700 Sobic009G146700--Sobic001G286700 Sobic009G146700--Sobic007G180200 Sobic006G107500 Sobic006G107500 Sobic009G146700--Sobic006G107500 Sobic009G146700--Sobic010G014500 Sobic005G199700--Sobic009G146700 Sobic005G199700--Sobic003G338700 Sobic005G199700--Sobic002G363300 Sobic005G199700--Sobic007G180200 Sobic005G199700--Sobic001G286700 Sobic006G273600 Sobic006G273600 Sobic005G199700--Sobic006G273600 Sobic005G199700--Sobic003G010700 Sobic003G027100 Sobic003G027100 Sobic005G199700--Sobic003G027100 Sobic005G199700--Sobic010G014700 Sobic010G014500--Sobic003G338700 Sobic010G077000 Sobic010G077000 Sobic010G014500--Sobic010G077000 Sobic010G014500--Sobic005G199700 Sobic010G014500--Sobic003G019900 Sobic010G014500--Sobic010G014700 Sobic010G014500--Sobic009G146700 Sobic001G299600 Sobic001G299600 Sobic010G014500--Sobic001G299600 Sobic007G165800 Sobic007G165800 Sobic010G014500--Sobic007G165800 Sobic010G014500--Sobic007G180200 Sobic010G014700--Sobic003G338700 Sobic010G014700--Sobic009G146700 Sobic010G014700--Sobic001G199400 Sobic010G014700--Sobic005G199700 Sobic010G014700--Sobic002G363300 Sobic010G014700--Sobic010G014500 Sobic010G014700--Sobic007G180200 Sobic010G014700--Sobic003G027100 Sobic004G215400 Sobic004G215400 Sobic010G014700--Sobic004G215400 Sobic002G363300--Sobic006G273600 Sobic002G363300--Sobic005G199700 Sobic002G363300--Sobic009G146700 Sobic002G363300--Sobic003G010700 Sobic002G363300--Sobic003G027100 Sobic002G363300--Sobic003G338700 Sobic002G363300--Sobic001G286700 Sobic005G009600 Sobic005G009600 Sobic002G363300--Sobic005G009600 Sobic007G170100 Sobic007G170100 Sobic002G363300--Sobic007G170100 Sobic010G235300 Sobic010G235300 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic001G286700--Sobic002G363300 Sobic004G211700 Sobic004G211700 Sobic001G286700--Sobic004G211700 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic001G286700--Sobic003G338700 Sobic001G286700--Sobic005G199700 Sobic001G286700--Sobic007G165800 Sobic007G180200--Sobic005G199700 Sobic007G180200--Sobic007G165800 Sobic007G180200--Sobic001G299600 Sobic007G180200--Sobic003G338700 Sobic007G180200--Sobic003G027100 Sobic007G180200--Sobic009G146700 Sobic007G180200--Sobic001G199400 Sobic007G180200--Sobic010G014700 Sobic007G180200--Sobic010G235300 Sobic001G199400--Sobic010G014700 Sobic003G113500 Sobic003G113500 Sobic001G199400--Sobic003G113500 Sobic001G199400--Sobic003G027100 Sobic001G199400--Sobic003G338700 Sobic001G199400--Sobic007G165800 Sobic010G078700 Sobic010G078700 Sobic001G199400--Sobic010G078700 Sobic003G070600 Sobic003G070600 Sobic001G199400--Sobic003G070600 Sobic001G199400--Sobic007G180200 Sobic001G074000 Sobic001G074000 Sobic001G199400--Sobic001G074000 Sobic006G274200 Sobic006G274200 Sobic003G019900--Sobic006G274200 Sobic001G493900 Sobic001G493900 Sobic003G019900--Sobic001G493900 Sobic003G019900--Sobic003G338700 Sobic008G151600 Sobic008G151600 Sobic003G019900--Sobic008G151600 Sobic007G147200 Sobic007G147200 Sobic003G019900--Sobic007G147200 Sobic003G019900--Sobic010G014500 Sobic006G163300 Sobic006G163300 Sobic003G019900--Sobic006G163300 Sobic003G019900--Sobic001G074000 Sobic004G267600 Sobic004G267600 Sobic003G019900--Sobic004G267600
Octagon: transcription factors


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