Gene annotation
Transcriptome id Sobic.001G286700.2,Sobic.001G286700.1
Synonym HDG5, HB-7, Sb01g028160
Functional annotation homeobox and START domains containing protein, putative, expressed
UniProt A0A1B6QLR7
Pfam PF00046 PF01852
Panther DB PTHR24326 PTHR24326:SF267
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding GO:0008289lipid binding


Orthologs (automatic annotation)
TAIR AT5G46880 : homeobox-7
RAP-DB (Rice) LOC_Os10g42490.1,LOC_Os10g42490.2 : homeobox and START domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a056774 , Zm00025a047725 , Zm00025a023723 , Zm00025a003493
Brachypodium PNT67971 , KQJ97974 , KQJ84101 , KQJ84100 , KQJ95130 , KQJ95129 , KQJ95128
Barley HORVU2Hr1G095210.7 , HORVU2Hr1G095210.6 , HORVU2Hr1G095210.5 , HORVU2Hr1G095210.4 , HORVU2Hr1G095210.3 , HORVU2Hr1G095210.2 , HORVU2Hr1G095210.1 , HORVU2Hr1G095210.8 , HORVU1Hr1G050620.6 , HORVU1Hr1G050620.7 , HORVU1Hr1G050620.4 , HORVU1Hr1G050620.5 , HORVU1Hr1G050620.2 , HORVU1Hr1G050620.3 , HORVU1Hr1G050620.1 , HORVU1Hr1G050620.8 , HORVU1Hr1G050620.9 , HORVU1Hr1G050620.14 , HORVU1Hr1G050620.15 , HORVU1Hr1G050620.16 , HORVU1Hr1G050620.17 , HORVU1Hr1G050620.10 , HORVU1Hr1G050620.11 , HORVU1Hr1G050620.12 , HORVU1Hr1G050620.13 , HORVU1Hr1G050620.21 , HORVU1Hr1G050620.20 , HORVU1Hr1G050620.22 , HORVU1Hr1G050620.18 , HORVU1Hr1G050620.19
Wheat TraesCS7D02G168700 , TraesCS1D02G197300 , TraesCS1A02G193400 , TraesCS1B02G208400 , TraesCS2A02G401200 , TraesCS2A02G401200 , TraesCS2A02G401200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
2 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
3 Sobic.002G363300 - -
4 Sobic.004G211700 - -
5 Sobic.006G273600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G473500 domain of unknown function DUF966 domain containing protein, expressed -
7 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
9 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
10 Sobic.005G009600 pectinesterase, putative, expressed K01051: pectinesterase
11 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
12 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
13 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
14 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
15 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
16 Sobic.010G166300 expressed protein -
17 Sobic.009G023900 homeobox domain containing protein, expressed -
18 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.001G199400 monocopper oxidase, putative, expressed -
20 Sobic.007G180200 NC domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G286700 Sobic001G286700 Sobic010G235300 Sobic010G235300 Sobic001G286700--Sobic010G235300 Sobic003G027100 Sobic003G027100 Sobic001G286700--Sobic003G027100 Sobic002G363300 Sobic002G363300 Sobic001G286700--Sobic002G363300 Sobic004G211700 Sobic004G211700 Sobic001G286700--Sobic004G211700 Sobic006G273600 Sobic006G273600 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic003G338700 Sobic003G338700 Sobic001G286700--Sobic003G338700 Sobic005G199700 Sobic005G199700 Sobic001G286700--Sobic005G199700 Sobic007G165800 Sobic007G165800 Sobic001G286700--Sobic007G165800 Sobic010G235300--Sobic001G286700 Sobic005G009600 Sobic005G009600 Sobic010G235300--Sobic005G009600 Sobic010G235300--Sobic006G273600 Sobic010G235300--Sobic003G027100 Sobic007G170100 Sobic007G170100 Sobic010G235300--Sobic007G170100 Sobic010G235300--Sobic007G165800 Sobic010G166300 Sobic010G166300 Sobic010G235300--Sobic010G166300 Sobic003G178500 Sobic003G178500 Sobic010G235300--Sobic003G178500 Sobic010G235300--Sobic002G363300 Sobic003G027100--Sobic003G178500 Sobic003G027100--Sobic002G363300 Sobic003G027100--Sobic001G286700 Sobic003G027100--Sobic010G235300 Sobic003G027100--Sobic004G211700 Sobic003G027100--Sobic010G166300 Sobic003G027100--Sobic007G165800 Sobic005G034500 Sobic005G034500 Sobic003G027100--Sobic005G034500 Sobic002G312300 Sobic002G312300 Sobic003G027100--Sobic002G312300 Sobic002G363300--Sobic006G273600 Sobic002G363300--Sobic005G199700 Sobic009G146700 Sobic009G146700 Sobic002G363300--Sobic009G146700 Sobic003G010700 Sobic003G010700 Sobic002G363300--Sobic003G010700 Sobic002G363300--Sobic003G027100 Sobic002G363300--Sobic003G338700 Sobic002G363300--Sobic001G286700 Sobic002G363300--Sobic005G009600 Sobic002G363300--Sobic007G170100 Sobic004G342000 Sobic004G342000 Sobic004G211700--Sobic004G342000 Sobic009G023900 Sobic009G023900 Sobic004G211700--Sobic009G023900 Sobic004G211700--Sobic003G178500 Sobic004G211700--Sobic001G286700 Sobic004G211700--Sobic003G027100 Sobic005G218000 Sobic005G218000 Sobic004G211700--Sobic005G218000 Sobic001G341700 Sobic001G341700 Sobic004G211700--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic004G211700--Sobic002G312200 Sobic004G211700--Sobic010G166300 Sobic006G273600--Sobic007G170100 Sobic006G273600--Sobic005G009600 Sobic006G273600--Sobic002G363300 Sobic006G273600--Sobic003G010700 Sobic006G273600--Sobic010G235300 Sobic006G273600--Sobic001G286700 Sobic006G273600--Sobic005G199700 Sobic006G273600--Sobic003G027100 Sobic006G273600--Sobic010G166300 Sobic001G473500--Sobic001G286700 Sobic001G473500--Sobic004G211700 Sobic001G473500--Sobic002G363300 Sobic001G473500--Sobic010G235300 Sobic001G046400 Sobic001G046400 Sobic001G473500--Sobic001G046400 Sobic009G208300 Sobic009G208300 Sobic001G473500--Sobic009G208300 Sobic010G192500 Sobic010G192500 Sobic001G473500--Sobic010G192500 Sobic009G060800 Sobic009G060800 Sobic001G473500--Sobic009G060800 Sobic001G473500--Sobic009G146700 Sobic003G338700--Sobic009G146700 Sobic003G338700--Sobic005G199700 Sobic010G014500 Sobic010G014500 Sobic003G338700--Sobic010G014500 Sobic010G014700 Sobic010G014700 Sobic003G338700--Sobic010G014700 Sobic003G338700--Sobic002G363300 Sobic003G338700--Sobic001G286700 Sobic007G180200 Sobic007G180200 Sobic003G338700--Sobic007G180200 Sobic001G199400 Sobic001G199400 Sobic003G338700--Sobic001G199400 Sobic003G019900 Sobic003G019900 Sobic003G338700--Sobic003G019900 Sobic005G199700--Sobic009G146700 Sobic005G199700--Sobic003G338700 Sobic005G199700--Sobic002G363300 Sobic005G199700--Sobic007G180200 Sobic005G199700--Sobic001G286700 Sobic005G199700--Sobic006G273600 Sobic005G199700--Sobic003G010700 Sobic005G199700--Sobic003G027100 Sobic005G199700--Sobic010G014700 Sobic004G274600 Sobic004G274600 Sobic007G165800--Sobic004G274600 Sobic001G434100 Sobic001G434100 Sobic007G165800--Sobic001G434100 Sobic007G165800--Sobic007G180200 Sobic007G165800--Sobic001G286700 Sobic007G165800--Sobic003G027100 Sobic007G165800--Sobic010G235300 Sobic007G165800--Sobic001G199400 Sobic007G165800--Sobic007G170100 Sobic007G165800--Sobic003G338700
Octagon: transcription factors


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