Gene annotation
Transcriptome id Sobic.001G434100.1
Synonym RPS2, Sb01g040830
Functional annotation NB-ARC/LRR disease resistance protein, putative, expressed
UniProt C5WQV5
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF597
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13459; disease resistance protein RPS2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G26090 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os03g14900.1 : NB-ARC/LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a001619
Brachypodium KQK22526
Barley HORVU0Hr1G008580.1
Wheat TraesCS4A02G082800 , TraesCS4D02G221600 , TraesCS4B02G221200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
2 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
3 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
4 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
5 Sobic.001G199400 monocopper oxidase, putative, expressed -
6 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.007G032100 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
8 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
9 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
10 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
12 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
13 Sobic.004G211700 - -
14 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
15 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
17 Sobic.003G300200 expressed protein -
18 Sobic.009G141300 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
20 Sobic.007G180200 NC domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G434100 Sobic001G434100 Sobic007G165800 Sobic007G165800 Sobic001G434100--Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic001G434100--Sobic004G274600 Sobic001G286700 Sobic001G286700 Sobic001G434100--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic001G434100--Sobic003G027100 Sobic001G199400 Sobic001G199400 Sobic001G434100--Sobic001G199400 Sobic001G470200 Sobic001G470200 Sobic001G434100--Sobic001G470200 Sobic007G032100 Sobic007G032100 Sobic001G434100--Sobic007G032100 Sobic010G235300 Sobic010G235300 Sobic001G434100--Sobic010G235300 Sobic004G357000 Sobic004G357000 Sobic001G434100--Sobic004G357000 Sobic007G165800--Sobic004G274600 Sobic007G165800--Sobic001G434100 Sobic007G180200 Sobic007G180200 Sobic007G165800--Sobic007G180200 Sobic007G165800--Sobic001G286700 Sobic007G165800--Sobic003G027100 Sobic007G165800--Sobic010G235300 Sobic007G165800--Sobic001G199400 Sobic007G170100 Sobic007G170100 Sobic007G165800--Sobic007G170100 Sobic003G338700 Sobic003G338700 Sobic007G165800--Sobic003G338700 Sobic004G274600--Sobic007G165800 Sobic004G211700 Sobic004G211700 Sobic004G274600--Sobic004G211700 Sobic004G274600--Sobic001G434100 Sobic004G274600--Sobic001G286700 Sobic001G207600 Sobic001G207600 Sobic004G274600--Sobic001G207600 Sobic008G097700 Sobic008G097700 Sobic004G274600--Sobic008G097700 Sobic008G008100 Sobic008G008100 Sobic004G274600--Sobic008G008100 Sobic004G274600--Sobic003G027100 Sobic003G298700 Sobic003G298700 Sobic004G274600--Sobic003G298700 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic002G363300 Sobic002G363300 Sobic001G286700--Sobic002G363300 Sobic001G286700--Sobic004G211700 Sobic006G273600 Sobic006G273600 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic001G286700--Sobic003G338700 Sobic005G199700 Sobic005G199700 Sobic001G286700--Sobic005G199700 Sobic001G286700--Sobic007G165800 Sobic003G178500 Sobic003G178500 Sobic003G027100--Sobic003G178500 Sobic003G027100--Sobic002G363300 Sobic003G027100--Sobic001G286700 Sobic003G027100--Sobic010G235300 Sobic003G027100--Sobic004G211700 Sobic010G166300 Sobic010G166300 Sobic003G027100--Sobic010G166300 Sobic003G027100--Sobic007G165800 Sobic005G034500 Sobic005G034500 Sobic003G027100--Sobic005G034500 Sobic002G312300 Sobic002G312300 Sobic003G027100--Sobic002G312300 Sobic010G014700 Sobic010G014700 Sobic001G199400--Sobic010G014700 Sobic003G113500 Sobic003G113500 Sobic001G199400--Sobic003G113500 Sobic001G199400--Sobic003G027100 Sobic001G199400--Sobic003G338700 Sobic001G199400--Sobic007G165800 Sobic010G078700 Sobic010G078700 Sobic001G199400--Sobic010G078700 Sobic003G070600 Sobic003G070600 Sobic001G199400--Sobic003G070600 Sobic001G199400--Sobic007G180200 Sobic001G074000 Sobic001G074000 Sobic001G199400--Sobic001G074000 Sobic001G470200--Sobic004G357000 Sobic004G317200 Sobic004G317200 Sobic001G470200--Sobic004G317200 Sobic010G020600 Sobic010G020600 Sobic001G470200--Sobic010G020600 Sobic001G470200--Sobic007G032100 Sobic001G470200--Sobic007G165800 Sobic001G470200--Sobic004G274600 Sobic003G089300 Sobic003G089300 Sobic001G470200--Sobic003G089300 Sobic001G470200--Sobic008G097700 Sobic001G470200--Sobic001G434100 Sobic007G032100--Sobic001G286700 Sobic007G065300 Sobic007G065300 Sobic007G032100--Sobic007G065300 Sobic007G032100--Sobic001G470200 Sobic007G032100--Sobic001G434100 Sobic007G032100--Sobic007G165800 Sobic005G032600 Sobic005G032600 Sobic007G032100--Sobic005G032600 Sobic007G032100--Sobic001G199400 Sobic007G032100--Sobic003G338700 Sobic007G032100--Sobic004G274600 Sobic010G235300--Sobic001G286700 Sobic005G009600 Sobic005G009600 Sobic010G235300--Sobic005G009600 Sobic010G235300--Sobic006G273600 Sobic010G235300--Sobic003G027100 Sobic010G235300--Sobic007G170100 Sobic010G235300--Sobic007G165800 Sobic010G235300--Sobic010G166300 Sobic010G235300--Sobic003G178500 Sobic010G235300--Sobic002G363300 Sobic007G211200 Sobic007G211200 Sobic004G357000--Sobic007G211200 Sobic004G357000--Sobic003G113500 Sobic004G357000--Sobic004G317200 Sobic004G357000--Sobic003G089300 Sobic004G248100 Sobic004G248100 Sobic004G357000--Sobic004G248100 Sobic002G032500 Sobic002G032500 Sobic004G357000--Sobic002G032500 Sobic005G129600 Sobic005G129600 Sobic004G357000--Sobic005G129600 Sobic004G357000--Sobic001G470200 Sobic004G357000--Sobic004G211700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.