Gene annotation
Transcriptome id Sobic.003G300200.1
Synonym Sb04g005490
Functional annotation expressed protein
UniProt A0A1W0VZM8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g55160.1 : expressed protein
MaizeGDB (Corn) Zm00025a027526
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G267800 thaumatin-like protein 1 precursor, putative, expressed -
2 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
3 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
4 Sobic.009G141300 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.005G204100 kelch repeat protein, putative, expressed -
6 Sobic.002G139800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.010G010900 expressed protein -
9 Sobic.007G189400 BEE 1, putative, expressed -
10 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
11 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
12 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
13 Sobic.006G153500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP25 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
14 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.001G135600 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.002G260600 BEE 1, putative, expressed -
17 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
18 Sobic.001G142200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
19 Sobic.001G199400 monocopper oxidase, putative, expressed -
20 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1


Gene co-expression network
sample Sobic003G300200 Sobic003G300200 Sobic001G267800 Sobic001G267800 Sobic003G300200--Sobic001G267800 Sobic001G434100 Sobic001G434100 Sobic003G300200--Sobic001G434100 Sobic002G072700 Sobic002G072700 Sobic003G300200--Sobic002G072700 Sobic009G141300 Sobic009G141300 Sobic003G300200--Sobic009G141300 Sobic005G204100 Sobic005G204100 Sobic003G300200--Sobic005G204100 Sobic002G139800 Sobic002G139800 Sobic003G300200--Sobic002G139800 Sobic001G221900 Sobic001G221900 Sobic003G300200--Sobic001G221900 Sobic010G010900 Sobic010G010900 Sobic003G300200--Sobic010G010900 Sobic007G189400 Sobic007G189400 Sobic003G300200--Sobic007G189400 Sobic001G267800--Sobic003G300200 Sobic005G129600 Sobic005G129600 Sobic001G267800--Sobic005G129600 Sobic003G113500 Sobic003G113500 Sobic001G267800--Sobic003G113500 Sobic001G267800--Sobic007G189400 Sobic003G309400 Sobic003G309400 Sobic001G267800--Sobic003G309400 Sobic003G300400 Sobic003G300400 Sobic001G267800--Sobic003G300400 Sobic010G078700 Sobic010G078700 Sobic001G267800--Sobic010G078700 Sobic001G267800--Sobic002G072700 Sobic001G267800--Sobic009G141300 Sobic007G165800 Sobic007G165800 Sobic001G434100--Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic001G434100--Sobic004G274600 Sobic001G286700 Sobic001G286700 Sobic001G434100--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic001G434100--Sobic003G027100 Sobic001G199400 Sobic001G199400 Sobic001G434100--Sobic001G199400 Sobic001G470200 Sobic001G470200 Sobic001G434100--Sobic001G470200 Sobic007G032100 Sobic007G032100 Sobic001G434100--Sobic007G032100 Sobic010G235300 Sobic010G235300 Sobic001G434100--Sobic010G235300 Sobic004G357000 Sobic004G357000 Sobic001G434100--Sobic004G357000 Sobic002G072700--Sobic007G189400 Sobic001G228100 Sobic001G228100 Sobic002G072700--Sobic001G228100 Sobic005G029700 Sobic005G029700 Sobic002G072700--Sobic005G029700 Sobic002G072700--Sobic005G204100 Sobic002G072700--Sobic002G139800 Sobic007G142900 Sobic007G142900 Sobic002G072700--Sobic007G142900 Sobic002G072700--Sobic001G221900 Sobic009G259500 Sobic009G259500 Sobic002G072700--Sobic009G259500 Sobic006G247700 Sobic006G247700 Sobic002G072700--Sobic006G247700 Sobic009G254500 Sobic009G254500 Sobic009G141300--Sobic009G254500 Sobic002G011000 Sobic002G011000 Sobic009G141300--Sobic002G011000 Sobic001G135600 Sobic001G135600 Sobic009G141300--Sobic001G135600 Sobic004G302700 Sobic004G302700 Sobic009G141300--Sobic004G302700 Sobic001G119200 Sobic001G119200 Sobic009G141300--Sobic001G119200 Sobic009G141300--Sobic003G309400 Sobic004G211700 Sobic004G211700 Sobic009G141300--Sobic004G211700 Sobic004G342000 Sobic004G342000 Sobic009G141300--Sobic004G342000 Sobic002G416400 Sobic002G416400 Sobic009G141300--Sobic002G416400 Sobic002G216600 Sobic002G216600 Sobic005G204100--Sobic002G216600 Sobic005G204100--Sobic009G259500 Sobic005G204100--Sobic002G072700 Sobic005G204100--Sobic007G142900 Sobic002G098500 Sobic002G098500 Sobic005G204100--Sobic002G098500 Sobic005G204100--Sobic001G221900 Sobic001G384700 Sobic001G384700 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic005G204100--Sobic007G189400 Sobic001G438500 Sobic001G438500 Sobic002G139800--Sobic001G438500 Sobic004G062100 Sobic004G062100 Sobic002G139800--Sobic004G062100 Sobic002G139800--Sobic009G254500 Sobic002G139800--Sobic002G011000 Sobic002G139800--Sobic007G189400 Sobic008G187400 Sobic008G187400 Sobic002G139800--Sobic008G187400 Sobic002G067500 Sobic002G067500 Sobic002G139800--Sobic002G067500 Sobic002G139800--Sobic002G072700 Sobic002G139800--Sobic009G141300 Sobic003G070600 Sobic003G070600 Sobic001G221900--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic001G221900--Sobic009G235700 Sobic010G020600 Sobic010G020600 Sobic001G221900--Sobic010G020600 Sobic001G221900--Sobic010G078700 Sobic003G339600 Sobic003G339600 Sobic001G221900--Sobic003G339600 Sobic001G221900--Sobic001G199400 Sobic004G248100 Sobic004G248100 Sobic001G221900--Sobic004G248100 Sobic001G074000 Sobic001G074000 Sobic001G221900--Sobic001G074000 Sobic001G221900--Sobic003G113500 Sobic001G488900 Sobic001G488900 Sobic010G010900--Sobic001G488900 Sobic010G010900--Sobic006G272500 Sobic010G010900--Sobic003G309400 Sobic002G419200 Sobic002G419200 Sobic010G010900--Sobic002G419200 Sobic010G010900--Sobic003G300400 Sobic009G172700 Sobic009G172700 Sobic010G010900--Sobic009G172700 Sobic010G010900--Sobic001G267800 Sobic002G032500 Sobic002G032500 Sobic010G010900--Sobic002G032500 Sobic002G071850 Sobic002G071850 Sobic010G010900--Sobic002G071850 Sobic007G189400--Sobic002G072700 Sobic005G188500 Sobic005G188500 Sobic007G189400--Sobic005G188500 Sobic007G189400--Sobic009G254500 Sobic007G189400--Sobic003G339600 Sobic001G488400 Sobic001G488400 Sobic007G189400--Sobic001G488400 Sobic007G189400--Sobic010G020600 Sobic006G044200 Sobic006G044200 Sobic007G189400--Sobic006G044200 Sobic007G189400--Sobic001G119200 Sobic007G189400--Sobic002G139800
Octagon: transcription factors


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