Gene annotation
Transcriptome id Sobic.001G142200.1
Synonym Sb01g012380
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt A0A1B6QIX5
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G34480 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os03g46660.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a007523 , Zm00025a016919 , Zm00025a001447 , Zm00025a017147
Brachypodium KQK13467 , PNT77798 , PNT77799 , PNT77796 , PNT77797 , PNT74215 , KQK22721 , KQK13839
Barley HORVU4Hr1G065340.16 , HORVU4Hr1G065340.17 , HORVU4Hr1G065340.15 , HORVU4Hr1G065340.12 , HORVU4Hr1G065340.13 , HORVU4Hr1G065340.10 , HORVU4Hr1G065340.11 , HORVU4Hr1G003090.2 , HORVU4Hr1G003090.3 , HORVU4Hr1G065340.14 , HORVU4Hr1G065340.8 , HORVU4Hr1G065340.9 , HORVU4Hr1G065340.4 , HORVU4Hr1G065340.5 , HORVU4Hr1G065340.6 , HORVU4Hr1G065340.7 , HORVU4Hr1G065340.1 , HORVU4Hr1G065340.2 , HORVU4Hr1G065340.3
Wheat TraesCS4B02G020100 , TraesCS4A02G077800 , TraesCS4D02G018300 , TraesCS4D02G235000 , TraesCS4A02G293500 , TraesCS4B02G233900 , TraesCS4B02G233900 , TraesCS4B02G233900 , TraesCS4B02G233900
Populus -


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cDNA sequences
Sobic.001G142200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.003G339600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
3 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
4 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
5 Sobic.001G267800 thaumatin-like protein 1 precursor, putative, expressed -
6 Sobic.004G248100 endoglucanase, putative, expressed -
7 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
8 Sobic.010G010900 expressed protein -
9 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
10 Sobic.003G186400 expressed protein -
11 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
12 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
13 Sobic.003G356600 ATROPGEF7/ROPGEF7, putative, expressed -
14 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
15 Sobic.003G300400 expressed protein -
16 Sobic.003G300200 expressed protein -
17 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
18 Sobic.004G283800 dehydration response related protein, putative, expressed -
19 Sobic.001G199400 monocopper oxidase, putative, expressed -
20 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -


Gene co-expression network
sample Sobic001G142200 Sobic001G142200 Sobic001G221900 Sobic001G221900 Sobic001G142200--Sobic001G221900 Sobic003G339600 Sobic003G339600 Sobic001G142200--Sobic003G339600 Sobic009G235700 Sobic009G235700 Sobic001G142200--Sobic009G235700 Sobic003G360700 Sobic003G360700 Sobic001G142200--Sobic003G360700 Sobic001G267800 Sobic001G267800 Sobic001G142200--Sobic001G267800 Sobic004G248100 Sobic004G248100 Sobic001G142200--Sobic004G248100 Sobic010G020600 Sobic010G020600 Sobic001G142200--Sobic010G020600 Sobic010G010900 Sobic010G010900 Sobic001G142200--Sobic010G010900 Sobic007G165800 Sobic007G165800 Sobic001G142200--Sobic007G165800 Sobic003G070600 Sobic003G070600 Sobic001G221900--Sobic003G070600 Sobic001G221900--Sobic009G235700 Sobic001G221900--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic001G221900--Sobic010G078700 Sobic001G221900--Sobic003G339600 Sobic001G199400 Sobic001G199400 Sobic001G221900--Sobic001G199400 Sobic001G221900--Sobic004G248100 Sobic001G074000 Sobic001G074000 Sobic001G221900--Sobic001G074000 Sobic003G113500 Sobic003G113500 Sobic001G221900--Sobic003G113500 Sobic003G339600--Sobic010G020600 Sobic003G300400 Sobic003G300400 Sobic003G339600--Sobic003G300400 Sobic009G254500 Sobic009G254500 Sobic003G339600--Sobic009G254500 Sobic003G339600--Sobic004G248100 Sobic002G229700 Sobic002G229700 Sobic003G339600--Sobic002G229700 Sobic004G283800 Sobic004G283800 Sobic003G339600--Sobic004G283800 Sobic003G309400 Sobic003G309400 Sobic003G339600--Sobic003G309400 Sobic002G382500 Sobic002G382500 Sobic003G339600--Sobic002G382500 Sobic007G189400 Sobic007G189400 Sobic003G339600--Sobic007G189400 Sobic006G125800 Sobic006G125800 Sobic009G235700--Sobic006G125800 Sobic009G235700--Sobic010G020600 Sobic009G235700--Sobic001G221900 Sobic009G235700--Sobic004G248100 Sobic009G235700--Sobic003G339600 Sobic001G522300 Sobic001G522300 Sobic009G235700--Sobic001G522300 Sobic009G235700--Sobic007G165800 Sobic009G235700--Sobic004G283800 Sobic009G235700--Sobic003G360700 Sobic003G360700--Sobic009G235700 Sobic003G360700--Sobic001G221900 Sobic009G172700 Sobic009G172700 Sobic003G360700--Sobic009G172700 Sobic003G360700--Sobic001G074000 Sobic002G419200 Sobic002G419200 Sobic003G360700--Sobic002G419200 Sobic004G274600 Sobic004G274600 Sobic003G360700--Sobic004G274600 Sobic003G360700--Sobic001G522300 Sobic003G360700--Sobic004G283800 Sobic003G360700--Sobic010G020600 Sobic003G300200 Sobic003G300200 Sobic001G267800--Sobic003G300200 Sobic005G129600 Sobic005G129600 Sobic001G267800--Sobic005G129600 Sobic001G267800--Sobic003G113500 Sobic001G267800--Sobic007G189400 Sobic001G267800--Sobic003G309400 Sobic001G267800--Sobic003G300400 Sobic001G267800--Sobic010G078700 Sobic002G072700 Sobic002G072700 Sobic001G267800--Sobic002G072700 Sobic009G141300 Sobic009G141300 Sobic001G267800--Sobic009G141300 Sobic002G032500 Sobic002G032500 Sobic004G248100--Sobic002G032500 Sobic004G248100--Sobic003G113500 Sobic004G248100--Sobic010G020600 Sobic004G357000 Sobic004G357000 Sobic004G248100--Sobic004G357000 Sobic004G248100--Sobic003G309400 Sobic003G338200 Sobic003G338200 Sobic004G248100--Sobic003G338200 Sobic004G248100--Sobic003G339600 Sobic006G044200 Sobic006G044200 Sobic004G248100--Sobic006G044200 Sobic007G094200 Sobic007G094200 Sobic004G248100--Sobic007G094200 Sobic004G317200 Sobic004G317200 Sobic010G020600--Sobic004G317200 Sobic010G020600--Sobic004G248100 Sobic010G020600--Sobic003G339600 Sobic010G020600--Sobic003G070600 Sobic010G020600--Sobic009G235700 Sobic007G160300 Sobic007G160300 Sobic010G020600--Sobic007G160300 Sobic003G018700 Sobic003G018700 Sobic010G020600--Sobic003G018700 Sobic008G097700 Sobic008G097700 Sobic010G020600--Sobic008G097700 Sobic010G020600--Sobic001G221900 Sobic001G488900 Sobic001G488900 Sobic010G010900--Sobic001G488900 Sobic006G272500 Sobic006G272500 Sobic010G010900--Sobic006G272500 Sobic010G010900--Sobic003G309400 Sobic010G010900--Sobic002G419200 Sobic010G010900--Sobic003G300400 Sobic010G010900--Sobic009G172700 Sobic010G010900--Sobic001G267800 Sobic010G010900--Sobic002G032500 Sobic002G071850 Sobic002G071850 Sobic010G010900--Sobic002G071850 Sobic007G165800--Sobic004G274600 Sobic001G434100 Sobic001G434100 Sobic007G165800--Sobic001G434100 Sobic007G180200 Sobic007G180200 Sobic007G165800--Sobic007G180200 Sobic001G286700 Sobic001G286700 Sobic007G165800--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic007G165800--Sobic003G027100 Sobic010G235300 Sobic010G235300 Sobic007G165800--Sobic010G235300 Sobic007G165800--Sobic001G199400 Sobic007G170100 Sobic007G170100 Sobic007G165800--Sobic007G170100 Sobic003G338700 Sobic003G338700 Sobic007G165800--Sobic003G338700
Octagon: transcription factors


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