Gene annotation
Transcriptome id Sobic.003G339600.1
Synonym CHAL, Sb03g038370, epidermal patterning factor/EPF-like, EPFL6, SbEPFL8
Functional annotation Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure. (PubMedID : 23755192)
expressed protein
UniProt C5XNB9
Pfam -
Panther DB PTHR33109 PTHR33109:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30370 : allergen-related
RAP-DB (Rice) LOC_Os01g60900.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK10374
Barley -
Wheat TraesCS3D02G339700 , TraesCS3A02G346000 , TraesCS3B02G377700
Populus -


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cDNA sequences
Sobic.003G339600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
2 Sobic.003G300400 expressed protein -
3 Sobic.009G254500 protein kinase, putative, expressed -
4 Sobic.004G248100 endoglucanase, putative, expressed -
5 Sobic.002G229700 expressed protein -
6 Sobic.004G283800 dehydration response related protein, putative, expressed -
7 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
8 Sobic.002G382500 heavy metal-associated domain containing protein, expressed -
9 Sobic.007G189400 BEE 1, putative, expressed -
10 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
12 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
13 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
14 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
16 Sobic.002G400600 Os7bglu26 - beta-mannosidase/glucosidase/exoglucanase, expressed K05350: beta-glucosidase
17 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
18 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
19 Sobic.002G068400 - -
20 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase


Gene co-expression network
sample Sobic003G339600 Sobic003G339600 Sobic010G020600 Sobic010G020600 Sobic003G339600--Sobic010G020600 Sobic003G300400 Sobic003G300400 Sobic003G339600--Sobic003G300400 Sobic009G254500 Sobic009G254500 Sobic003G339600--Sobic009G254500 Sobic004G248100 Sobic004G248100 Sobic003G339600--Sobic004G248100 Sobic002G229700 Sobic002G229700 Sobic003G339600--Sobic002G229700 Sobic004G283800 Sobic004G283800 Sobic003G339600--Sobic004G283800 Sobic003G309400 Sobic003G309400 Sobic003G339600--Sobic003G309400 Sobic002G382500 Sobic002G382500 Sobic003G339600--Sobic002G382500 Sobic007G189400 Sobic007G189400 Sobic003G339600--Sobic007G189400 Sobic004G317200 Sobic004G317200 Sobic010G020600--Sobic004G317200 Sobic010G020600--Sobic004G248100 Sobic010G020600--Sobic003G339600 Sobic003G070600 Sobic003G070600 Sobic010G020600--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic010G020600--Sobic009G235700 Sobic007G160300 Sobic007G160300 Sobic010G020600--Sobic007G160300 Sobic003G018700 Sobic003G018700 Sobic010G020600--Sobic003G018700 Sobic008G097700 Sobic008G097700 Sobic010G020600--Sobic008G097700 Sobic001G221900 Sobic001G221900 Sobic010G020600--Sobic001G221900 Sobic003G300400--Sobic003G309400 Sobic002G032500 Sobic002G032500 Sobic003G300400--Sobic002G032500 Sobic002G419200 Sobic002G419200 Sobic003G300400--Sobic002G419200 Sobic003G300400--Sobic009G254500 Sobic007G094200 Sobic007G094200 Sobic003G300400--Sobic007G094200 Sobic003G300400--Sobic003G339600 Sobic003G300400--Sobic002G229700 Sobic008G154700 Sobic008G154700 Sobic003G300400--Sobic008G154700 Sobic009G141300 Sobic009G141300 Sobic003G300400--Sobic009G141300 Sobic002G011000 Sobic002G011000 Sobic009G254500--Sobic002G011000 Sobic008G012600 Sobic008G012600 Sobic009G254500--Sobic008G012600 Sobic009G254500--Sobic009G141300 Sobic001G119200 Sobic001G119200 Sobic009G254500--Sobic001G119200 Sobic001G438500 Sobic001G438500 Sobic009G254500--Sobic001G438500 Sobic006G160800 Sobic006G160800 Sobic009G254500--Sobic006G160800 Sobic010G077700 Sobic010G077700 Sobic009G254500--Sobic010G077700 Sobic004G062100 Sobic004G062100 Sobic009G254500--Sobic004G062100 Sobic009G254500--Sobic003G300400 Sobic004G248100--Sobic002G032500 Sobic003G113500 Sobic003G113500 Sobic004G248100--Sobic003G113500 Sobic004G248100--Sobic010G020600 Sobic004G357000 Sobic004G357000 Sobic004G248100--Sobic004G357000 Sobic004G248100--Sobic003G309400 Sobic003G338200 Sobic003G338200 Sobic004G248100--Sobic003G338200 Sobic004G248100--Sobic003G339600 Sobic006G044200 Sobic006G044200 Sobic004G248100--Sobic006G044200 Sobic004G248100--Sobic007G094200 Sobic002G229700--Sobic003G300400 Sobic002G229700--Sobic003G309400 Sobic002G229700--Sobic003G339600 Sobic002G229700--Sobic004G283800 Sobic002G229700--Sobic002G032500 Sobic004G342000 Sobic004G342000 Sobic002G229700--Sobic004G342000 Sobic002G229700--Sobic003G338200 Sobic002G229700--Sobic009G254500 Sobic009G174100 Sobic009G174100 Sobic002G229700--Sobic009G174100 Sobic001G207600 Sobic001G207600 Sobic004G283800--Sobic001G207600 Sobic004G274600 Sobic004G274600 Sobic004G283800--Sobic004G274600 Sobic004G283800--Sobic003G339600 Sobic004G283800--Sobic002G229700 Sobic004G283800--Sobic003G070600 Sobic004G283800--Sobic010G020600 Sobic004G283800--Sobic009G235700 Sobic004G283800--Sobic004G357000 Sobic004G283800--Sobic003G113500 Sobic003G309400--Sobic003G300400 Sobic003G309400--Sobic002G032500 Sobic003G309400--Sobic004G248100 Sobic003G309400--Sobic003G338200 Sobic003G309400--Sobic009G254500 Sobic003G309400--Sobic007G094200 Sobic003G309400--Sobic002G229700 Sobic003G309400--Sobic009G141300 Sobic003G309400--Sobic002G011000 Sobic010G027700 Sobic010G027700 Sobic002G382500--Sobic010G027700 Sobic002G068400 Sobic002G068400 Sobic002G382500--Sobic002G068400 Sobic008G035400 Sobic008G035400 Sobic002G382500--Sobic008G035400 Sobic002G382500--Sobic003G339600 Sobic002G382500--Sobic006G044200 Sobic001G488400 Sobic001G488400 Sobic002G382500--Sobic001G488400 Sobic006G219100 Sobic006G219100 Sobic002G382500--Sobic006G219100 Sobic009G037300 Sobic009G037300 Sobic002G382500--Sobic009G037300 Sobic002G023700 Sobic002G023700 Sobic002G382500--Sobic002G023700 Sobic002G072700 Sobic002G072700 Sobic007G189400--Sobic002G072700 Sobic005G188500 Sobic005G188500 Sobic007G189400--Sobic005G188500 Sobic007G189400--Sobic009G254500 Sobic007G189400--Sobic003G339600 Sobic007G189400--Sobic001G488400 Sobic007G189400--Sobic010G020600 Sobic007G189400--Sobic006G044200 Sobic007G189400--Sobic001G119200 Sobic002G139800 Sobic002G139800 Sobic007G189400--Sobic002G139800
Octagon: transcription factors


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