Gene annotation
Transcriptome id Sobic.002G032500.1
Synonym Sb02g002820
Functional annotation leucine-rich repeat family protein, putative, expressed
UniProt C5X9H3
Pfam PF08263 PF07714 PF13855
Panther DB PTHR27000 PTHR27000:SF160
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT4G20940 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os07g05190.1 : leucine-rich repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a016171
Brachypodium KQK21033
Barley HORVU2Hr1G060560.10 , HORVU2Hr1G060560.1 , HORVU2Hr1G060560.3 , HORVU2Hr1G060560.2 , HORVU2Hr1G060560.5 , HORVU2Hr1G060560.4 , HORVU2Hr1G060560.7 , HORVU2Hr1G060560.6 , HORVU2Hr1G060560.9 , HORVU2Hr1G060560.8
Wheat TraesCS2A02G253500 , TraesCS2B02G273100 , TraesCS2D02G254000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
2 Sobic.007G094200 expressed protein -
3 Sobic.003G300400 expressed protein -
4 Sobic.007G211200 inactive receptor kinase At2g26730 precursor, putative, expressed -
5 Sobic.004G211700 - -
6 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
7 Sobic.004G248100 endoglucanase, putative, expressed -
8 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
9 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
10 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.002G416400 basic helix-loop-helix domain containing protein, expressed -
12 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
13 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
14 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
15 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
16 Sobic.009G254500 protein kinase, putative, expressed -
17 Sobic.005G034500 receptor kinase, putative, expressed -
18 Sobic.009G141300 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
20 Sobic.001G046400 expressed protein -


Gene co-expression network
sample Sobic002G032500 Sobic002G032500 Sobic003G309400 Sobic003G309400 Sobic002G032500--Sobic003G309400 Sobic007G094200 Sobic007G094200 Sobic002G032500--Sobic007G094200 Sobic003G300400 Sobic003G300400 Sobic002G032500--Sobic003G300400 Sobic007G211200 Sobic007G211200 Sobic002G032500--Sobic007G211200 Sobic004G211700 Sobic004G211700 Sobic002G032500--Sobic004G211700 Sobic003G089300 Sobic003G089300 Sobic002G032500--Sobic003G089300 Sobic004G248100 Sobic004G248100 Sobic002G032500--Sobic004G248100 Sobic005G091000 Sobic005G091000 Sobic002G032500--Sobic005G091000 Sobic003G338200 Sobic003G338200 Sobic002G032500--Sobic003G338200 Sobic003G309400--Sobic003G300400 Sobic003G309400--Sobic002G032500 Sobic003G309400--Sobic004G248100 Sobic003G309400--Sobic003G338200 Sobic009G254500 Sobic009G254500 Sobic003G309400--Sobic009G254500 Sobic003G309400--Sobic007G094200 Sobic002G229700 Sobic002G229700 Sobic003G309400--Sobic002G229700 Sobic009G141300 Sobic009G141300 Sobic003G309400--Sobic009G141300 Sobic002G011000 Sobic002G011000 Sobic003G309400--Sobic002G011000 Sobic007G094200--Sobic002G032500 Sobic002G416400 Sobic002G416400 Sobic007G094200--Sobic002G416400 Sobic008G154700 Sobic008G154700 Sobic007G094200--Sobic008G154700 Sobic003G178500 Sobic003G178500 Sobic007G094200--Sobic003G178500 Sobic004G342000 Sobic004G342000 Sobic007G094200--Sobic004G342000 Sobic010G027700 Sobic010G027700 Sobic007G094200--Sobic010G027700 Sobic001G438500 Sobic001G438500 Sobic007G094200--Sobic001G438500 Sobic004G227900 Sobic004G227900 Sobic007G094200--Sobic004G227900 Sobic006G219100 Sobic006G219100 Sobic007G094200--Sobic006G219100 Sobic003G300400--Sobic003G309400 Sobic003G300400--Sobic002G032500 Sobic002G419200 Sobic002G419200 Sobic003G300400--Sobic002G419200 Sobic003G300400--Sobic009G254500 Sobic003G300400--Sobic007G094200 Sobic003G339600 Sobic003G339600 Sobic003G300400--Sobic003G339600 Sobic003G300400--Sobic002G229700 Sobic003G300400--Sobic008G154700 Sobic003G300400--Sobic009G141300 Sobic001G046400 Sobic001G046400 Sobic007G211200--Sobic001G046400 Sobic004G357000 Sobic004G357000 Sobic007G211200--Sobic004G357000 Sobic007G211200--Sobic003G089300 Sobic007G211200--Sobic002G032500 Sobic007G211200--Sobic004G211700 Sobic007G211200--Sobic004G342000 Sobic003G113500 Sobic003G113500 Sobic007G211200--Sobic003G113500 Sobic001G135600 Sobic001G135600 Sobic007G211200--Sobic001G135600 Sobic002G337600 Sobic002G337600 Sobic007G211200--Sobic002G337600 Sobic004G211700--Sobic004G342000 Sobic009G023900 Sobic009G023900 Sobic004G211700--Sobic009G023900 Sobic004G211700--Sobic003G178500 Sobic001G286700 Sobic001G286700 Sobic004G211700--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic004G211700--Sobic003G027100 Sobic005G218000 Sobic005G218000 Sobic004G211700--Sobic005G218000 Sobic001G341700 Sobic001G341700 Sobic004G211700--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic004G211700--Sobic002G312200 Sobic010G166300 Sobic010G166300 Sobic004G211700--Sobic010G166300 Sobic003G089300--Sobic007G211200 Sobic009G060800 Sobic009G060800 Sobic003G089300--Sobic009G060800 Sobic010G192500 Sobic010G192500 Sobic003G089300--Sobic010G192500 Sobic003G089300--Sobic002G032500 Sobic003G089300--Sobic004G357000 Sobic007G160300 Sobic007G160300 Sobic003G089300--Sobic007G160300 Sobic003G089300--Sobic001G286700 Sobic003G089300--Sobic004G211700 Sobic001G155700 Sobic001G155700 Sobic003G089300--Sobic001G155700 Sobic004G248100--Sobic002G032500 Sobic004G248100--Sobic003G113500 Sobic010G020600 Sobic010G020600 Sobic004G248100--Sobic010G020600 Sobic004G248100--Sobic004G357000 Sobic004G248100--Sobic003G309400 Sobic004G248100--Sobic003G338200 Sobic004G248100--Sobic003G339600 Sobic006G044200 Sobic006G044200 Sobic004G248100--Sobic006G044200 Sobic004G248100--Sobic007G094200 Sobic005G091000--Sobic002G032500 Sobic006G105600 Sobic006G105600 Sobic005G091000--Sobic006G105600 Sobic001G267100 Sobic001G267100 Sobic005G091000--Sobic001G267100 Sobic005G091000--Sobic003G309400 Sobic005G091000--Sobic003G089300 Sobic005G091000--Sobic003G338200 Sobic001G381100 Sobic001G381100 Sobic005G091000--Sobic001G381100 Sobic002G224200 Sobic002G224200 Sobic005G091000--Sobic002G224200 Sobic006G074900 Sobic006G074900 Sobic005G091000--Sobic006G074900 Sobic003G338200--Sobic002G032500 Sobic003G338200--Sobic002G419200 Sobic003G338200--Sobic003G309400 Sobic003G338200--Sobic004G248100 Sobic001G345200 Sobic001G345200 Sobic003G338200--Sobic001G345200 Sobic003G116100 Sobic003G116100 Sobic003G338200--Sobic003G116100 Sobic003G338200--Sobic007G094200 Sobic003G277200 Sobic003G277200 Sobic003G338200--Sobic003G277200 Sobic003G338200--Sobic003G300400
Octagon: transcription factors


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