Gene annotation
Transcriptome id Sobic.003G338200.1
Synonym Sb03g038240
Functional annotation receptor-like protein kinase precursor, putative, expressed
UniProt C5XNA5
Pfam PF08263 PF00560 PF07714
Panther DB PTHR27000 PTHR27000:SF162
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G56370 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os01g60670.1 : receptor-like protein kinase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027052
Brachypodium KQK10357
Barley HORVU3Hr1G081050.1 , HORVU3Hr1G081050.3 , HORVU3Hr1G081050.2
Wheat TraesCS3B02G376200 , TraesCS3A02G344300 , TraesCS3D02G337800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
2 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
4 Sobic.004G248100 endoglucanase, putative, expressed -
5 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
6 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.007G094200 expressed protein -
8 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
9 Sobic.003G300400 expressed protein -
10 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
11 Sobic.008G187400 - -
12 Sobic.002G229700 expressed protein -
13 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.010G216600 expressed protein -
15 Sobic.006G219100 expressed protein -
16 Sobic.002G160800 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
18 Sobic.002G362700 zinc finger family protein, putative, expressed -
19 Sobic.003G419700 classical arabinogalactan protein 26 precursor, putative, expressed -
20 Sobic.001G488400 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659850)@bHLH family protein, putative, expressed -


Gene co-expression network
sample Sobic003G338200 Sobic003G338200 Sobic002G032500 Sobic002G032500 Sobic003G338200--Sobic002G032500 Sobic002G419200 Sobic002G419200 Sobic003G338200--Sobic002G419200 Sobic003G309400 Sobic003G309400 Sobic003G338200--Sobic003G309400 Sobic004G248100 Sobic004G248100 Sobic003G338200--Sobic004G248100 Sobic001G345200 Sobic001G345200 Sobic003G338200--Sobic001G345200 Sobic003G116100 Sobic003G116100 Sobic003G338200--Sobic003G116100 Sobic007G094200 Sobic007G094200 Sobic003G338200--Sobic007G094200 Sobic003G277200 Sobic003G277200 Sobic003G338200--Sobic003G277200 Sobic003G300400 Sobic003G300400 Sobic003G338200--Sobic003G300400 Sobic002G032500--Sobic003G309400 Sobic002G032500--Sobic007G094200 Sobic002G032500--Sobic003G300400 Sobic007G211200 Sobic007G211200 Sobic002G032500--Sobic007G211200 Sobic004G211700 Sobic004G211700 Sobic002G032500--Sobic004G211700 Sobic003G089300 Sobic003G089300 Sobic002G032500--Sobic003G089300 Sobic002G032500--Sobic004G248100 Sobic005G091000 Sobic005G091000 Sobic002G032500--Sobic005G091000 Sobic002G032500--Sobic003G338200 Sobic002G419200--Sobic003G300400 Sobic002G419200--Sobic003G338200 Sobic002G419200--Sobic003G116100 Sobic002G419200--Sobic003G309400 Sobic002G419200--Sobic003G277200 Sobic001G285200 Sobic001G285200 Sobic002G419200--Sobic001G285200 Sobic002G419200--Sobic002G032500 Sobic002G419200--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic002G419200--Sobic003G339600 Sobic003G309400--Sobic003G300400 Sobic003G309400--Sobic002G032500 Sobic003G309400--Sobic004G248100 Sobic003G309400--Sobic003G338200 Sobic009G254500 Sobic009G254500 Sobic003G309400--Sobic009G254500 Sobic003G309400--Sobic007G094200 Sobic002G229700 Sobic002G229700 Sobic003G309400--Sobic002G229700 Sobic009G141300 Sobic009G141300 Sobic003G309400--Sobic009G141300 Sobic002G011000 Sobic002G011000 Sobic003G309400--Sobic002G011000 Sobic004G248100--Sobic002G032500 Sobic003G113500 Sobic003G113500 Sobic004G248100--Sobic003G113500 Sobic010G020600 Sobic010G020600 Sobic004G248100--Sobic010G020600 Sobic004G357000 Sobic004G357000 Sobic004G248100--Sobic004G357000 Sobic004G248100--Sobic003G309400 Sobic004G248100--Sobic003G338200 Sobic004G248100--Sobic003G339600 Sobic006G044200 Sobic006G044200 Sobic004G248100--Sobic006G044200 Sobic004G248100--Sobic007G094200 Sobic005G098400 Sobic005G098400 Sobic001G345200--Sobic005G098400 Sobic001G345200--Sobic003G338200 Sobic002G016400 Sobic002G016400 Sobic001G345200--Sobic002G016400 Sobic001G267100 Sobic001G267100 Sobic001G345200--Sobic001G267100 Sobic001G345200--Sobic003G116100 Sobic001G345200--Sobic005G091000 Sobic001G305300 Sobic001G305300 Sobic001G345200--Sobic001G305300 Sobic008G187400 Sobic008G187400 Sobic001G345200--Sobic008G187400 Sobic001G345200--Sobic003G277200 Sobic003G116100--Sobic002G419200 Sobic003G116100--Sobic007G094200 Sobic003G116100--Sobic003G338200 Sobic006G219100 Sobic006G219100 Sobic003G116100--Sobic006G219100 Sobic003G116100--Sobic006G044200 Sobic001G488400 Sobic001G488400 Sobic003G116100--Sobic001G488400 Sobic003G116100--Sobic003G277200 Sobic003G116100--Sobic003G300400 Sobic003G116100--Sobic008G187400 Sobic007G094200--Sobic002G032500 Sobic002G416400 Sobic002G416400 Sobic007G094200--Sobic002G416400 Sobic008G154700 Sobic008G154700 Sobic007G094200--Sobic008G154700 Sobic003G178500 Sobic003G178500 Sobic007G094200--Sobic003G178500 Sobic004G342000 Sobic004G342000 Sobic007G094200--Sobic004G342000 Sobic010G027700 Sobic010G027700 Sobic007G094200--Sobic010G027700 Sobic001G438500 Sobic001G438500 Sobic007G094200--Sobic001G438500 Sobic004G227900 Sobic004G227900 Sobic007G094200--Sobic004G227900 Sobic007G094200--Sobic006G219100 Sobic003G277200--Sobic002G419200 Sobic003G277200--Sobic003G338200 Sobic003G277200--Sobic003G116100 Sobic008G039800 Sobic008G039800 Sobic003G277200--Sobic008G039800 Sobic010G216600 Sobic010G216600 Sobic003G277200--Sobic010G216600 Sobic003G277200--Sobic001G345200 Sobic003G277200--Sobic001G285200 Sobic007G012800 Sobic007G012800 Sobic003G277200--Sobic007G012800 Sobic001G037400 Sobic001G037400 Sobic003G277200--Sobic001G037400 Sobic003G300400--Sobic003G309400 Sobic003G300400--Sobic002G032500 Sobic003G300400--Sobic002G419200 Sobic003G300400--Sobic009G254500 Sobic003G300400--Sobic007G094200 Sobic003G300400--Sobic003G339600 Sobic003G300400--Sobic002G229700 Sobic003G300400--Sobic008G154700 Sobic003G300400--Sobic009G141300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.