Gene annotation
Transcriptome id Sobic.004G342000.1
Synonym CER1, Sb04g036940
Functional annotation WAX2, putative, expressed
UniProt A0A1Z5RRB7
Pfam PF04116 PF12076
Panther DB PTHR11863 PTHR11863:SF54
NCBI CDD -
KEGG Orthology K15404; K15404, aldehyde decarbonylase
Gene Ontology GO:0016491; oxidoreductase activity GO:0006633fatty acid biosynthetic process GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G02205 : Fatty acid hydroxylase superfamily
RAP-DB (Rice) LOC_Os02g56920.1 : WAX2, putative, expressed
MaizeGDB (Corn) Zm00025a021122 , Zm00025a017649 , Zm00025a032821
Brachypodium KQK00380 , KQK00381 , KQJ97039 , KQJ97037 , KQK01314 , KQK01313 , KQJ97038
Barley HORVU6Hr1G058000.11 , HORVU6Hr1G058000.10 , HORVU6Hr1G058000.12 , HORVU6Hr1G089980.16 , HORVU6Hr1G089980.11 , HORVU6Hr1G089980.12 , HORVU6Hr1G089980.13 , HORVU6Hr1G058000.5 , HORVU6Hr1G058000.4 , HORVU6Hr1G058000.7 , HORVU6Hr1G058000.6 , HORVU6Hr1G058000.1 , HORVU6Hr1G058000.3 , HORVU6Hr1G058000.2 , HORVU1Hr1G039830.2 , HORVU6Hr1G058000.8 , HORVU1Hr1G039830.1 , HORVU4Hr1G001510.1 , HORVU6Hr1G089980.8 , HORVU6Hr1G089980.9 , HORVU6Hr1G089980.6 , HORVU6Hr1G089980.7 , HORVU6Hr1G089980.4 , HORVU6Hr1G089980.5 , HORVU6Hr1G089980.2 , HORVU6Hr1G089980.3 , HORVU6Hr1G089980.1 , HORVU6Hr1G089980.15 , HORVU6Hr1G089980.10 , HORVU6Hr1G058000.9
Wheat TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6A02G226500 , TraesCS6A02G226500 , TraesCS1B02G168400 , TraesCS6A02G384600 , TraesCS1A02G150900 , TraesCS6B02G255100 , TraesCS6B02G255100 , TraesCS6B02G255100 , TraesCS6B02G255100 , TraesCS6B02G255100 , TraesCS1D02G147900 , TraesCS1D02G147900 , TraesCS1D02G147800 , TraesCS6B02G423900 , TraesCS1B02G168500 , TraesCS6D02G369400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
2 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
3 Sobic.004G211700 - -
4 Sobic.002G029700 DUF640 domain containing protein, putative, expressed -
5 Sobic.007G076100 transferase family protein, putative, expressed -
6 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
7 Sobic.002G416400 basic helix-loop-helix domain containing protein, expressed -
8 Sobic.006G151800 OsRR5 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
9 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.005G118700 expressed protein -
11 Sobic.004G318800 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
12 Sobic.001G046400 expressed protein -
13 Sobic.001G179400 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
14 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
15 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
16 Sobic.006G079500 AMP-binding domain containing protein, expressed -
17 Sobic.004G045500 phytosulfokine receptor precursor, putative, expressed -
18 Sobic.007G094200 expressed protein -
19 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
20 Sobic.002G068400 - -


Gene co-expression network
sample Sobic004G342000 Sobic004G342000 Sobic005G218000 Sobic005G218000 Sobic004G342000--Sobic005G218000 Sobic001G341700 Sobic001G341700 Sobic004G342000--Sobic001G341700 Sobic004G211700 Sobic004G211700 Sobic004G342000--Sobic004G211700 Sobic002G029700 Sobic002G029700 Sobic004G342000--Sobic002G029700 Sobic007G076100 Sobic007G076100 Sobic004G342000--Sobic007G076100 Sobic008G012600 Sobic008G012600 Sobic004G342000--Sobic008G012600 Sobic002G416400 Sobic002G416400 Sobic004G342000--Sobic002G416400 Sobic006G151800 Sobic006G151800 Sobic004G342000--Sobic006G151800 Sobic006G089700 Sobic006G089700 Sobic004G342000--Sobic006G089700 Sobic005G218000--Sobic007G076100 Sobic005G218000--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic005G218000--Sobic002G312200 Sobic006G092300 Sobic006G092300 Sobic005G218000--Sobic006G092300 Sobic004G318800 Sobic004G318800 Sobic005G218000--Sobic004G318800 Sobic006G079500 Sobic006G079500 Sobic005G218000--Sobic006G079500 Sobic001G491400 Sobic001G491400 Sobic005G218000--Sobic001G491400 Sobic001G266100 Sobic001G266100 Sobic005G218000--Sobic001G266100 Sobic010G049600 Sobic010G049600 Sobic005G218000--Sobic010G049600 Sobic001G341700--Sobic007G076100 Sobic001G341700--Sobic004G318800 Sobic001G341700--Sobic005G218000 Sobic001G341700--Sobic006G079500 Sobic001G341700--Sobic006G092300 Sobic001G341700--Sobic006G089700 Sobic001G341700--Sobic002G312200 Sobic001G341700--Sobic002G029700 Sobic003G178500 Sobic003G178500 Sobic001G341700--Sobic003G178500 Sobic004G211700--Sobic004G342000 Sobic009G023900 Sobic009G023900 Sobic004G211700--Sobic009G023900 Sobic004G211700--Sobic003G178500 Sobic001G286700 Sobic001G286700 Sobic004G211700--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic004G211700--Sobic003G027100 Sobic004G211700--Sobic005G218000 Sobic004G211700--Sobic001G341700 Sobic004G211700--Sobic002G312200 Sobic010G166300 Sobic010G166300 Sobic004G211700--Sobic010G166300 Sobic002G029700--Sobic006G151800 Sobic006G098300 Sobic006G098300 Sobic002G029700--Sobic006G098300 Sobic001G334501 Sobic001G334501 Sobic002G029700--Sobic001G334501 Sobic005G089700 Sobic005G089700 Sobic002G029700--Sobic005G089700 Sobic005G226500 Sobic005G226500 Sobic002G029700--Sobic005G226500 Sobic007G048500 Sobic007G048500 Sobic002G029700--Sobic007G048500 Sobic009G075000 Sobic009G075000 Sobic002G029700--Sobic009G075000 Sobic007G098600 Sobic007G098600 Sobic002G029700--Sobic007G098600 Sobic003G088200 Sobic003G088200 Sobic002G029700--Sobic003G088200 Sobic007G076100--Sobic004G318800 Sobic007G076100--Sobic005G218000 Sobic007G076100--Sobic001G341700 Sobic007G076100--Sobic006G079500 Sobic007G076100--Sobic003G178500 Sobic007G076100--Sobic006G092300 Sobic007G076100--Sobic002G312200 Sobic007G076100--Sobic006G089700 Sobic007G076100--Sobic002G416400 Sobic006G160800 Sobic006G160800 Sobic008G012600--Sobic006G160800 Sobic008G012600--Sobic001G266100 Sobic005G110900 Sobic005G110900 Sobic008G012600--Sobic005G110900 Sobic008G012600--Sobic010G049600 Sobic008G012600--Sobic001G491400 Sobic008G012600--Sobic005G218000 Sobic010G215700 Sobic010G215700 Sobic008G012600--Sobic010G215700 Sobic008G004200 Sobic008G004200 Sobic008G012600--Sobic008G004200 Sobic009G254500 Sobic009G254500 Sobic008G012600--Sobic009G254500 Sobic002G416400--Sobic003G178500 Sobic002G416400--Sobic007G076100 Sobic002G416400--Sobic004G318800 Sobic002G416400--Sobic005G218000 Sobic007G094200 Sobic007G094200 Sobic002G416400--Sobic007G094200 Sobic002G416400--Sobic001G341700 Sobic002G416400--Sobic004G342000 Sobic002G416400--Sobic006G079500 Sobic002G416400--Sobic006G092300 Sobic006G151800--Sobic002G029700 Sobic006G151800--Sobic001G334501 Sobic006G151800--Sobic006G098300 Sobic007G037400 Sobic007G037400 Sobic006G151800--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic006G151800--Sobic007G107500 Sobic006G151800--Sobic003G088200 Sobic006G151800--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic006G151800--Sobic001G133200 Sobic007G206000 Sobic007G206000 Sobic006G089700--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic006G089700--Sobic010G236000 Sobic006G089700--Sobic006G079500 Sobic004G202800 Sobic004G202800 Sobic006G089700--Sobic004G202800 Sobic003G271700 Sobic003G271700 Sobic006G089700--Sobic003G271700 Sobic002G410600 Sobic002G410600 Sobic006G089700--Sobic002G410600 Sobic006G006800 Sobic006G006800 Sobic006G089700--Sobic006G006800 Sobic006G089700--Sobic004G318800 Sobic003G038700 Sobic003G038700 Sobic006G089700--Sobic003G038700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.