Gene annotation
| Transcriptome id | Sobic.006G151800.1 |
|---|---|
| Synonym | ATRR1, MEE7, ARR4, Sb06g022960, IBC7 |
| Functional annotation | OsRR5 type-A response regulator, expressed |
| UniProt | C5YCG0 |
| Pfam | PF00072 |
| Panther DB | PTHR26402 PTHR26402:SF566 |
| NCBI CDD | - |
| KEGG Orthology | K14492; two-component response regulator ARR-A family |
| Gene Ontology | GO:0000160; phosphorelay signal transduction system |
Orthologs (automatic annotation)
| TAIR | AT1G10470 : response regulator 4 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g44280.1 : OsRR5 type-A response regulator, expressed |
| MaizeGDB (Corn) | Zm00025a021063 , Zm00025a010625 , Zm00025a009346 |
| Brachypodium | KQJ83664 , PNT61245 , KQK00441 , KQK16433 |
| Barley | HORVU6Hr1G059200.1 , HORVU6Hr1G059200.9 , HORVU6Hr1G059200.4 , HORVU6Hr1G059200.5 , HORVU6Hr1G059200.6 , HORVU6Hr1G059200.7 , HORVU6Hr1G059200.2 , HORVU6Hr1G059200.3 , HORVU6Hr1G059200.8 , HORVU2Hr1G090270.2 , HORVU2Hr1G090270.1 |
| Wheat | TraesCS2D02G374300 , TraesCS2A02G377900 , TraesCS6D02G213700 , TraesCS6D02G213700 , TraesCS2B02G394900 , TraesCS6B02G259700 , TraesCS6A02G221800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G029700 | DUF640 domain containing protein, putative, expressed | - |
| 2 | Sobic.001G334501 | - | K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase |
| 3 | Sobic.006G098300 | alpha/beta hydrolase fold, putative, expressed | - |
| 4 | Sobic.007G037400 | expressed protein | - |
| 5 | Sobic.007G107500 | LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 6 | Sobic.003G088200 | dihydroflavonol-4-reductase, putative, expressed | - |
| 7 | Sobic.007G098600 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 8 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 9 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 10 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 11 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 12 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 13 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 14 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 15 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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