Gene annotation
Transcriptome id Sobic.005G118700.1
Synonym Sb05g017190
Functional annotation expressed protein
UniProt C5Y2J2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g44120.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.006G185600 HOTHEAD precursor, putative, expressed K00108: betA, choline dehydrogenase
3 Sobic.005G179800 OsMADS87 - MADS-box family gene with M-gamma type-box, expressed -
4 Sobic.008G013400 nodulin, putative, expressed -
5 Sobic.004G202800 glycosyl hydrolase family 5 protein, putative, expressed -
6 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
7 Sobic.005G180000 OsMADS87 - MADS-box family gene with M-gamma type-box, expressed -
8 Sobic.006G006800 expressed protein -
9 Sobic.010G236000 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
10 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
11 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
12 Sobic.003G271700 - -
13 Sobic.006G079500 AMP-binding domain containing protein, expressed -
14 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
16 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
17 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
18 Sobic.007G076100 transferase family protein, putative, expressed -
19 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
20 Sobic.005G226500 thaumatin family domain containing protein, expressed -


Gene co-expression network
sample Sobic005G118700 Sobic005G118700 Sobic006G089700 Sobic006G089700 Sobic005G118700--Sobic006G089700 Sobic006G185600 Sobic006G185600 Sobic005G118700--Sobic006G185600 Sobic005G179800 Sobic005G179800 Sobic005G118700--Sobic005G179800 Sobic008G013400 Sobic008G013400 Sobic005G118700--Sobic008G013400 Sobic004G202800 Sobic004G202800 Sobic005G118700--Sobic004G202800 Sobic002G312200 Sobic002G312200 Sobic005G118700--Sobic002G312200 Sobic005G180000 Sobic005G180000 Sobic005G118700--Sobic005G180000 Sobic006G006800 Sobic006G006800 Sobic005G118700--Sobic006G006800 Sobic010G236000 Sobic010G236000 Sobic005G118700--Sobic010G236000 Sobic007G206000 Sobic007G206000 Sobic006G089700--Sobic007G206000 Sobic006G089700--Sobic010G236000 Sobic006G079500 Sobic006G079500 Sobic006G089700--Sobic006G079500 Sobic006G089700--Sobic004G202800 Sobic003G271700 Sobic003G271700 Sobic006G089700--Sobic003G271700 Sobic002G410600 Sobic002G410600 Sobic006G089700--Sobic002G410600 Sobic006G089700--Sobic006G006800 Sobic004G318800 Sobic004G318800 Sobic006G089700--Sobic004G318800 Sobic003G038700 Sobic003G038700 Sobic006G089700--Sobic003G038700 Sobic006G185600--Sobic005G179800 Sobic006G185600--Sobic005G180000 Sobic006G185600--Sobic005G118700 Sobic001G273200 Sobic001G273200 Sobic006G185600--Sobic001G273200 Sobic006G185600--Sobic008G013400 Sobic006G185600--Sobic006G089700 Sobic004G215400 Sobic004G215400 Sobic006G185600--Sobic004G215400 Sobic006G068200 Sobic006G068200 Sobic006G185600--Sobic006G068200 Sobic006G185600--Sobic002G312200 Sobic005G179800--Sobic005G180000 Sobic005G179800--Sobic006G185600 Sobic005G179800--Sobic001G273200 Sobic005G179800--Sobic005G118700 Sobic005G179800--Sobic008G013400 Sobic005G179800--Sobic006G089700 Sobic005G179800--Sobic004G215400 Sobic005G179800--Sobic006G068200 Sobic005G179800--Sobic004G202800 Sobic001G266100 Sobic001G266100 Sobic008G013400--Sobic001G266100 Sobic004G118100 Sobic004G118100 Sobic008G013400--Sobic004G118100 Sobic008G013400--Sobic005G118700 Sobic010G049600 Sobic010G049600 Sobic008G013400--Sobic010G049600 Sobic001G491400 Sobic001G491400 Sobic008G013400--Sobic001G491400 Sobic003G382400 Sobic003G382400 Sobic008G013400--Sobic003G382400 Sobic008G013400--Sobic003G271700 Sobic003G011700 Sobic003G011700 Sobic008G013400--Sobic003G011700 Sobic008G013400--Sobic002G312200 Sobic004G202800--Sobic006G006800 Sobic004G202800--Sobic010G236000 Sobic008G032400 Sobic008G032400 Sobic004G202800--Sobic008G032400 Sobic006G006900 Sobic006G006900 Sobic004G202800--Sobic006G006900 Sobic003G088200 Sobic003G088200 Sobic004G202800--Sobic003G088200 Sobic010G187400 Sobic010G187400 Sobic004G202800--Sobic010G187400 Sobic003G263800 Sobic003G263800 Sobic004G202800--Sobic003G263800 Sobic001G133200 Sobic001G133200 Sobic004G202800--Sobic001G133200 Sobic005G218000 Sobic005G218000 Sobic002G312200--Sobic005G218000 Sobic007G076100 Sobic007G076100 Sobic002G312200--Sobic007G076100 Sobic001G341700 Sobic001G341700 Sobic002G312200--Sobic001G341700 Sobic002G312200--Sobic004G318800 Sobic002G312200--Sobic006G089700 Sobic002G312200--Sobic005G118700 Sobic006G092300 Sobic006G092300 Sobic002G312200--Sobic006G092300 Sobic002G312300 Sobic002G312300 Sobic002G312200--Sobic002G312300 Sobic003G178500 Sobic003G178500 Sobic002G312200--Sobic003G178500 Sobic005G180000--Sobic005G179800 Sobic005G180000--Sobic006G185600 Sobic005G180000--Sobic001G273200 Sobic005G180000--Sobic005G118700 Sobic005G180000--Sobic004G215400 Sobic005G180000--Sobic006G068200 Sobic005G180000--Sobic008G013400 Sobic005G180000--Sobic006G089700 Sobic003G347100 Sobic003G347100 Sobic005G180000--Sobic003G347100 Sobic004G001700 Sobic004G001700 Sobic006G006800--Sobic004G001700 Sobic006G006800--Sobic004G202800 Sobic002G270400 Sobic002G270400 Sobic006G006800--Sobic002G270400 Sobic006G006800--Sobic006G006900 Sobic007G098600 Sobic007G098600 Sobic006G006800--Sobic007G098600 Sobic006G006800--Sobic001G133200 Sobic005G226500 Sobic005G226500 Sobic010G236000--Sobic005G226500 Sobic007G107500 Sobic007G107500 Sobic010G236000--Sobic007G107500 Sobic010G236000--Sobic006G006800 Sobic007G037400 Sobic007G037400 Sobic010G236000--Sobic007G037400 Sobic010G236000--Sobic004G202800 Sobic010G236000--Sobic006G006900 Sobic010G236000--Sobic007G098600 Sobic010G236000--Sobic003G263800 Sobic002G427550 Sobic002G427550 Sobic010G236000--Sobic002G427550
Octagon: transcription factors


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