Gene annotation
Transcriptome id Sobic.008G013400.1
Synonym Sb08g001220
Functional annotation nodulin, putative, expressed
UniProt C5YQJ9
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G09380 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os10g07998.1 : nodulin, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G266100 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.004G118100 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.005G118700 expressed protein -
4 Sobic.010G049600 expressed protein -
5 Sobic.001G491400 cytochrome P450, putative, expressed -
6 Sobic.003G382400 MLO domain containing protein, putative, expressed K08472: mlo protein
7 Sobic.003G271700 - -
8 Sobic.003G011700 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
9 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
10 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
11 Sobic.004G202800 glycosyl hydrolase family 5 protein, putative, expressed -
12 Sobic.007G049100 expressed protein -
13 Sobic.005G200700 dirigent, putative, expressed -
14 Sobic.010G236000 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
15 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.005G179800 OsMADS87 - MADS-box family gene with M-gamma type-box, expressed -
17 Sobic.006G006800 expressed protein -
18 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
19 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.002G399600 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic008G013400 Sobic008G013400 Sobic001G266100 Sobic001G266100 Sobic008G013400--Sobic001G266100 Sobic004G118100 Sobic004G118100 Sobic008G013400--Sobic004G118100 Sobic005G118700 Sobic005G118700 Sobic008G013400--Sobic005G118700 Sobic010G049600 Sobic010G049600 Sobic008G013400--Sobic010G049600 Sobic001G491400 Sobic001G491400 Sobic008G013400--Sobic001G491400 Sobic003G382400 Sobic003G382400 Sobic008G013400--Sobic003G382400 Sobic003G271700 Sobic003G271700 Sobic008G013400--Sobic003G271700 Sobic003G011700 Sobic003G011700 Sobic008G013400--Sobic003G011700 Sobic002G312200 Sobic002G312200 Sobic008G013400--Sobic002G312200 Sobic001G266100--Sobic010G049600 Sobic001G266100--Sobic001G491400 Sobic005G200700 Sobic005G200700 Sobic001G266100--Sobic005G200700 Sobic007G049100 Sobic007G049100 Sobic001G266100--Sobic007G049100 Sobic001G266100--Sobic004G118100 Sobic001G334501 Sobic001G334501 Sobic001G266100--Sobic001G334501 Sobic008G012600 Sobic008G012600 Sobic001G266100--Sobic008G012600 Sobic002G399600 Sobic002G399600 Sobic001G266100--Sobic002G399600 Sobic010G215700 Sobic010G215700 Sobic001G266100--Sobic010G215700 Sobic004G118100--Sobic001G491400 Sobic004G118100--Sobic010G049600 Sobic004G118100--Sobic005G200700 Sobic004G118100--Sobic002G399600 Sobic004G118100--Sobic007G049100 Sobic010G236000 Sobic010G236000 Sobic004G118100--Sobic010G236000 Sobic005G226500 Sobic005G226500 Sobic004G118100--Sobic005G226500 Sobic007G107500 Sobic007G107500 Sobic004G118100--Sobic007G107500 Sobic002G402233 Sobic002G402233 Sobic004G118100--Sobic002G402233 Sobic006G089700 Sobic006G089700 Sobic005G118700--Sobic006G089700 Sobic006G185600 Sobic006G185600 Sobic005G118700--Sobic006G185600 Sobic005G179800 Sobic005G179800 Sobic005G118700--Sobic005G179800 Sobic005G118700--Sobic008G013400 Sobic004G202800 Sobic004G202800 Sobic005G118700--Sobic004G202800 Sobic005G118700--Sobic002G312200 Sobic005G180000 Sobic005G180000 Sobic005G118700--Sobic005G180000 Sobic006G006800 Sobic006G006800 Sobic005G118700--Sobic006G006800 Sobic005G118700--Sobic010G236000 Sobic010G049600--Sobic001G491400 Sobic010G049600--Sobic005G200700 Sobic010G049600--Sobic007G049100 Sobic010G049600--Sobic001G266100 Sobic010G049600--Sobic002G399600 Sobic010G049600--Sobic001G334501 Sobic010G049600--Sobic005G226500 Sobic010G049600--Sobic007G107500 Sobic002G270400 Sobic002G270400 Sobic010G049600--Sobic002G270400 Sobic001G491400--Sobic010G049600 Sobic001G491400--Sobic005G200700 Sobic001G491400--Sobic002G399600 Sobic001G491400--Sobic007G049100 Sobic001G491400--Sobic001G334501 Sobic001G491400--Sobic005G226500 Sobic001G491400--Sobic002G270400 Sobic001G491400--Sobic007G107500 Sobic007G037400 Sobic007G037400 Sobic001G491400--Sobic007G037400 Sobic003G382400--Sobic001G266100 Sobic005G110900 Sobic005G110900 Sobic003G382400--Sobic005G110900 Sobic005G218000 Sobic005G218000 Sobic003G382400--Sobic005G218000 Sobic003G382400--Sobic004G118100 Sobic003G382400--Sobic010G049600 Sobic003G382400--Sobic001G491400 Sobic003G382400--Sobic008G013400 Sobic003G382400--Sobic008G012600 Sobic006G160800 Sobic006G160800 Sobic003G382400--Sobic006G160800 Sobic009G046000 Sobic009G046000 Sobic003G271700--Sobic009G046000 Sobic003G271700--Sobic006G089700 Sobic007G206000 Sobic007G206000 Sobic003G271700--Sobic007G206000 Sobic003G271700--Sobic010G236000 Sobic003G271700--Sobic004G202800 Sobic002G410600 Sobic002G410600 Sobic003G271700--Sobic002G410600 Sobic003G271700--Sobic005G200700 Sobic003G038700 Sobic003G038700 Sobic003G271700--Sobic003G038700 Sobic003G271700--Sobic006G006800 Sobic001G102600 Sobic001G102600 Sobic003G011700--Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic003G011700--Sobic010G189366 Sobic003G011700--Sobic001G491400 Sobic003G011700--Sobic010G049600 Sobic004G349150 Sobic004G349150 Sobic003G011700--Sobic004G349150 Sobic001G472400 Sobic001G472400 Sobic003G011700--Sobic001G472400 Sobic003G004900 Sobic003G004900 Sobic003G011700--Sobic003G004900 Sobic003G011700--Sobic005G200700 Sobic001G511600 Sobic001G511600 Sobic003G011700--Sobic001G511600 Sobic002G312200--Sobic005G218000 Sobic007G076100 Sobic007G076100 Sobic002G312200--Sobic007G076100 Sobic001G341700 Sobic001G341700 Sobic002G312200--Sobic001G341700 Sobic004G318800 Sobic004G318800 Sobic002G312200--Sobic004G318800 Sobic002G312200--Sobic006G089700 Sobic002G312200--Sobic005G118700 Sobic006G092300 Sobic006G092300 Sobic002G312200--Sobic006G092300 Sobic002G312300 Sobic002G312300 Sobic002G312200--Sobic002G312300 Sobic003G178500 Sobic003G178500 Sobic002G312200--Sobic003G178500
Octagon: transcription factors


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