Gene annotation
Transcriptome id Sobic.002G416400.1
Synonym Sb02g042810
Functional annotation basic helix-loop-helix domain containing protein, expressed
UniProt A0A1B6QG84
Pfam -
Panther DB PTHR31945 PTHR31945:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40435 : -
RAP-DB (Rice) LOC_Os07g47960.1 : basic helix-loop-helix domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK14664 , KQK21778
Barley -
Wheat TraesCS4B02G167700 , TraesCS4D02G170400 , TraesCS4A02G136800 , TraesCS4A02G136800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.007G076100 transferase family protein, putative, expressed -
3 Sobic.004G318800 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
4 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
5 Sobic.007G094200 expressed protein -
6 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
7 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
8 Sobic.006G079500 AMP-binding domain containing protein, expressed -
9 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
10 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
11 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
13 Sobic.001G438500 POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
14 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
15 Sobic.002G029700 DUF640 domain containing protein, putative, expressed -
16 Sobic.004G211700 - -
17 Sobic.005G226500 thaumatin family domain containing protein, expressed -
18 Sobic.004G227900 expansin precursor, putative, expressed -
19 Sobic.007G048500 CXXC1 - Cysteine-rich protein with CXXC and CXXXC motifs precursor, putative, expressed -
20 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -


Gene co-expression network
sample Sobic002G416400 Sobic002G416400 Sobic003G178500 Sobic003G178500 Sobic002G416400--Sobic003G178500 Sobic007G076100 Sobic007G076100 Sobic002G416400--Sobic007G076100 Sobic004G318800 Sobic004G318800 Sobic002G416400--Sobic004G318800 Sobic005G218000 Sobic005G218000 Sobic002G416400--Sobic005G218000 Sobic007G094200 Sobic007G094200 Sobic002G416400--Sobic007G094200 Sobic001G341700 Sobic001G341700 Sobic002G416400--Sobic001G341700 Sobic004G342000 Sobic004G342000 Sobic002G416400--Sobic004G342000 Sobic006G079500 Sobic006G079500 Sobic002G416400--Sobic006G079500 Sobic006G092300 Sobic006G092300 Sobic002G416400--Sobic006G092300 Sobic003G178500--Sobic007G076100 Sobic003G178500--Sobic002G416400 Sobic003G178500--Sobic005G218000 Sobic010G166300 Sobic010G166300 Sobic003G178500--Sobic010G166300 Sobic003G178500--Sobic004G318800 Sobic003G178500--Sobic001G341700 Sobic009G023900 Sobic009G023900 Sobic003G178500--Sobic009G023900 Sobic003G027100 Sobic003G027100 Sobic003G178500--Sobic003G027100 Sobic004G211700 Sobic004G211700 Sobic003G178500--Sobic004G211700 Sobic007G076100--Sobic004G318800 Sobic007G076100--Sobic005G218000 Sobic007G076100--Sobic001G341700 Sobic007G076100--Sobic006G079500 Sobic007G076100--Sobic003G178500 Sobic007G076100--Sobic006G092300 Sobic002G312200 Sobic002G312200 Sobic007G076100--Sobic002G312200 Sobic006G089700 Sobic006G089700 Sobic007G076100--Sobic006G089700 Sobic007G076100--Sobic002G416400 Sobic004G318800--Sobic007G076100 Sobic004G318800--Sobic006G079500 Sobic004G318800--Sobic001G341700 Sobic004G318800--Sobic006G092300 Sobic004G318800--Sobic005G218000 Sobic004G318800--Sobic006G089700 Sobic007G206000 Sobic007G206000 Sobic004G318800--Sobic007G206000 Sobic007G048500 Sobic007G048500 Sobic004G318800--Sobic007G048500 Sobic005G226500 Sobic005G226500 Sobic004G318800--Sobic005G226500 Sobic005G218000--Sobic007G076100 Sobic005G218000--Sobic001G341700 Sobic005G218000--Sobic002G312200 Sobic005G218000--Sobic006G092300 Sobic005G218000--Sobic004G318800 Sobic005G218000--Sobic006G079500 Sobic001G491400 Sobic001G491400 Sobic005G218000--Sobic001G491400 Sobic001G266100 Sobic001G266100 Sobic005G218000--Sobic001G266100 Sobic010G049600 Sobic010G049600 Sobic005G218000--Sobic010G049600 Sobic002G032500 Sobic002G032500 Sobic007G094200--Sobic002G032500 Sobic007G094200--Sobic002G416400 Sobic008G154700 Sobic008G154700 Sobic007G094200--Sobic008G154700 Sobic007G094200--Sobic003G178500 Sobic007G094200--Sobic004G342000 Sobic010G027700 Sobic010G027700 Sobic007G094200--Sobic010G027700 Sobic001G438500 Sobic001G438500 Sobic007G094200--Sobic001G438500 Sobic004G227900 Sobic004G227900 Sobic007G094200--Sobic004G227900 Sobic006G219100 Sobic006G219100 Sobic007G094200--Sobic006G219100 Sobic001G341700--Sobic007G076100 Sobic001G341700--Sobic004G318800 Sobic001G341700--Sobic005G218000 Sobic001G341700--Sobic006G079500 Sobic001G341700--Sobic006G092300 Sobic001G341700--Sobic006G089700 Sobic001G341700--Sobic002G312200 Sobic002G029700 Sobic002G029700 Sobic001G341700--Sobic002G029700 Sobic001G341700--Sobic003G178500 Sobic004G342000--Sobic005G218000 Sobic004G342000--Sobic001G341700 Sobic004G342000--Sobic004G211700 Sobic004G342000--Sobic002G029700 Sobic004G342000--Sobic007G076100 Sobic008G012600 Sobic008G012600 Sobic004G342000--Sobic008G012600 Sobic004G342000--Sobic002G416400 Sobic006G151800 Sobic006G151800 Sobic004G342000--Sobic006G151800 Sobic004G342000--Sobic006G089700 Sobic006G079500--Sobic005G226500 Sobic006G079500--Sobic007G048500 Sobic003G016000 Sobic003G016000 Sobic006G079500--Sobic003G016000 Sobic006G079500--Sobic007G206000 Sobic003G088200 Sobic003G088200 Sobic006G079500--Sobic003G088200 Sobic007G098600 Sobic007G098600 Sobic006G079500--Sobic007G098600 Sobic006G006900 Sobic006G006900 Sobic006G079500--Sobic006G006900 Sobic002G427550 Sobic002G427550 Sobic006G079500--Sobic002G427550 Sobic001G133200 Sobic001G133200 Sobic006G079500--Sobic001G133200 Sobic006G092300--Sobic006G079500 Sobic001G102600 Sobic001G102600 Sobic006G092300--Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic006G092300--Sobic010G189366 Sobic010G215700 Sobic010G215700 Sobic006G092300--Sobic010G215700 Sobic006G092300--Sobic007G206000 Sobic004G349150 Sobic004G349150 Sobic006G092300--Sobic004G349150 Sobic006G092300--Sobic005G226500 Sobic006G092300--Sobic001G491400 Sobic005G200700 Sobic005G200700 Sobic006G092300--Sobic005G200700
Octagon: transcription factors


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