Gene annotation
Transcriptome id Sobic.004G227900.2,Sobic.004G227900.1
Synonym ATHEXPBETA1.6, ATEXPB3, Sb04g027230, EXPB3
Functional annotation expansin precursor, putative, expressed
UniProt A0A1Z5RNX1 , C5XY99
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28250 : expansin B3
RAP-DB (Rice) LOC_Os02g42650.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020996 , Zm00025a010463
Brachypodium PNT61534 , KQJ83731 , KQK00497
Barley HORVU6Hr1G060410.7 , HORVU6Hr1G060410.1 , HORVU6Hr1G060410.2 , HORVU6Hr1G060410.8 , HORVU6Hr1G060410.21 , HORVU6Hr1G060410.11 , HORVU6Hr1G060410.10 , HORVU6Hr1G060410.12 , HORVU6Hr1G060410.18
Wheat TraesCS6A02G235800 , TraesCS2B02G390000 , TraesCS2B02G390000 , TraesCS6D02G218500 , TraesCS2D02G369200 , TraesCS2D02G369200 , TraesCS2A02G373000 , TraesCS2A02G373000 , TraesCS6B02G264400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G004200 MYB family transcription factor, putative, expressed -
2 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
3 Sobic.010G053300 expressed protein -
4 Sobic.005G089700 expressed protein -
5 Sobic.007G000600 CRP2 - Cysteine-rich family protein precursor, expressed -
6 Sobic.001G366000 LTPL1 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.005G200700 dirigent, putative, expressed -
8 Sobic.003G016000 LTPL18 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.008G032400 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.001G438400 POEI16 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
11 Sobic.007G107500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.002G399600 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.007G037400 expressed protein -
14 Sobic.005G226500 thaumatin family domain containing protein, expressed -
15 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
16 Sobic.003G088200 dihydroflavonol-4-reductase, putative, expressed -
17 Sobic.006G006900 expressed protein -
18 Sobic.010G187400 ABC-2 type transporter domain containing protein, expressed -
19 Sobic.007G098600 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.003G263800 LTPL150 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic004G227900 Sobic004G227900 Sobic008G004200 Sobic008G004200 Sobic004G227900--Sobic008G004200 Sobic001G334501 Sobic001G334501 Sobic004G227900--Sobic001G334501 Sobic010G053300 Sobic010G053300 Sobic004G227900--Sobic010G053300 Sobic005G089700 Sobic005G089700 Sobic004G227900--Sobic005G089700 Sobic007G000600 Sobic007G000600 Sobic004G227900--Sobic007G000600 Sobic001G366000 Sobic001G366000 Sobic004G227900--Sobic001G366000 Sobic005G200700 Sobic005G200700 Sobic004G227900--Sobic005G200700 Sobic003G016000 Sobic003G016000 Sobic004G227900--Sobic003G016000 Sobic008G032400 Sobic008G032400 Sobic004G227900--Sobic008G032400 Sobic008G004200--Sobic001G334501 Sobic008G004200--Sobic004G227900 Sobic008G004200--Sobic005G200700 Sobic001G491400 Sobic001G491400 Sobic008G004200--Sobic001G491400 Sobic010G049600 Sobic010G049600 Sobic008G004200--Sobic010G049600 Sobic010G215700 Sobic010G215700 Sobic008G004200--Sobic010G215700 Sobic008G004200--Sobic001G366000 Sobic002G399600 Sobic002G399600 Sobic008G004200--Sobic002G399600 Sobic002G410600 Sobic002G410600 Sobic008G004200--Sobic002G410600 Sobic001G334501--Sobic002G399600 Sobic002G270400 Sobic002G270400 Sobic001G334501--Sobic002G270400 Sobic007G037400 Sobic007G037400 Sobic001G334501--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic001G334501--Sobic007G107500 Sobic010G187400 Sobic010G187400 Sobic001G334501--Sobic010G187400 Sobic006G006900 Sobic006G006900 Sobic001G334501--Sobic006G006900 Sobic005G226500 Sobic005G226500 Sobic001G334501--Sobic005G226500 Sobic007G098600 Sobic007G098600 Sobic001G334501--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic001G334501--Sobic001G133200 Sobic003G088200 Sobic003G088200 Sobic010G053300--Sobic003G088200 Sobic010G053300--Sobic003G016000 Sobic003G263800 Sobic003G263800 Sobic010G053300--Sobic003G263800 Sobic002G427550 Sobic002G427550 Sobic010G053300--Sobic002G427550 Sobic010G053300--Sobic001G133200 Sobic005G089700--Sobic001G133200 Sobic007G000600--Sobic008G032400 Sobic007G000600--Sobic007G098600 Sobic007G000600--Sobic001G133200 Sobic002G165500 Sobic002G165500 Sobic001G366000--Sobic002G165500 Sobic001G366000--Sobic007G000600 Sobic001G366000--Sobic005G200700 Sobic001G366000--Sobic008G032400 Sobic009G046000 Sobic009G046000 Sobic001G366000--Sobic009G046000 Sobic001G366000--Sobic002G399600 Sobic001G366000--Sobic010G187400 Sobic004G349150 Sobic004G349150 Sobic001G366000--Sobic004G349150 Sobic001G366000--Sobic002G270400 Sobic005G200700--Sobic002G399600 Sobic005G200700--Sobic007G107500 Sobic005G200700--Sobic005G226500 Sobic005G200700--Sobic007G037400 Sobic005G200700--Sobic002G270400 Sobic005G200700--Sobic010G187400 Sobic005G200700--Sobic001G334501 Sobic005G200700--Sobic006G006900 Sobic005G200700--Sobic007G000600 Sobic003G016000--Sobic003G088200 Sobic003G016000--Sobic007G098600 Sobic003G016000--Sobic001G133200 Sobic008G032400--Sobic006G006900 Sobic008G032400--Sobic003G263800 Sobic008G032400--Sobic002G427550 Sobic008G032400--Sobic001G133200
Octagon: transcription factors


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