Gene annotation
Transcriptome id Sobic.001G179400.1
Synonym Sb01g015620, XTH9
Functional annotation glycosyl hydrolases family 16 protein, protein, expressed
UniProt C5WU65
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF11
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G03210 : xyloglucan endotransglucosylase/hydrolase 9
RAP-DB (Rice) LOC_Os04g53950.2 : glycosyl hydrolases family 16 protein, protein, expressed
MaizeGDB (Corn) Zm00025a018308 , Zm00025a048260 , Zm00025a009913 , Zm00025a018310 , Zm00025a009680 , Zm00025a056955 , Zm00025a009908
Brachypodium KQK17339 , KQK17338 , KQJ84798 , KQJ84412 , KQJ97550 , KQJ95699 , KQJ95697
Barley HORVU1Hr1G087320.3 , HORVU1Hr1G087320.2 , HORVU1Hr1G087320.1 , HORVU6Hr1G081590.1 , HORVU2Hr1G045330.4 , HORVU6Hr1G081590.3 , HORVU2Hr1G045330.6 , HORVU6Hr1G081590.5 , HORVU6Hr1G081590.4 , HORVU2Hr1G045330.3 , HORVU7Hr1G081740.1 , HORVU2Hr1G108420.5 , HORVU2Hr1G108420.6 , HORVU2Hr1G101160.3 , HORVU2Hr1G101160.2 , HORVU2Hr1G101160.1 , HORVU2Hr1G101160.4 , HORVU7Hr1G098370.2 , HORVU7Hr1G098370.3 , HORVU7Hr1G098370.1 , HORVU7Hr1G098390.1 , HORVU7Hr1G098390.2 , HORVU7Hr1G098390.3 , HORVU7Hr1G098390.4 , HORVU2Hr1G108420.4 , HORVU2Hr1G045330.5 , HORVU2Hr1G045330.7 , HORVU6Hr1G081590.2 , HORVU7Hr1G098370.4
Wheat TraesCS6D02G318500 , TraesCS2B02G454600 , TraesCS2B02G454600 , TraesCS1A02G396200 , TraesCS1D02G404300 , TraesCS7B02G327400 , TraesCS2A02G484100 , TraesCS2A02G484100 , TraesCS7B02G327700 , TraesCS2B02G454800 , TraesCS2D02G431600 , TraesCS7A02G427600 , TraesCS1B02G424500 , TraesCS7B02G327500 , TraesCS6B02G368300 , TraesCS7D02G419600 , TraesCS7A02G427100 , TraesCS2D02G484000 , TraesCS7D02G419400 , TraesCS2D02G484000 , TraesCS7A02G427300 , TraesCS2A02G433600 , TraesCS7A02G427200 , TraesCS2D02G431800 , TraesCS7A02G331200 , TraesCS2B02G510200 , TraesCS2B02G510200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G068400 - -
2 Sobic.004G215000 uncharacterized protein At4g06744 precursor, putative, expressed -
3 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
4 Sobic.003G120600 transmembrane protein 136, putative, expressed -
5 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
6 Sobic.007G125400 lysM domain containing protein, putative -
7 Sobic.004G227900 expansin precursor, putative, expressed -
8 Sobic.007G094200 expressed protein -
9 Sobic.002G179200 DUF623 domain containing protein, expressed -
10 Sobic.004G045500 phytosulfokine receptor precursor, putative, expressed -
11 Sobic.010G065700 expressed protein -
12 Sobic.006G219100 expressed protein -
13 Sobic.008G004200 MYB family transcription factor, putative, expressed -
14 Sobic.001G438500 POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
15 Sobic.010G077700 ZOS6-02 - C2H2 zinc finger protein, expressed -
16 Sobic.008G035400 stress responsive A/B Barrel domain containing protein, expressed -
17 Sobic.002G416400 basic helix-loop-helix domain containing protein, expressed -
18 Sobic.007G153100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659906)@expressed protein -
19 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
20 Sobic.002G029700 DUF640 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G179400 Sobic001G179400 Sobic002G068400 Sobic002G068400 Sobic001G179400--Sobic002G068400 Sobic004G215000 Sobic004G215000 Sobic001G179400--Sobic004G215000 Sobic004G342000 Sobic004G342000 Sobic001G179400--Sobic004G342000 Sobic003G120600 Sobic003G120600 Sobic001G179400--Sobic003G120600 Sobic010G027700 Sobic010G027700 Sobic001G179400--Sobic010G027700 Sobic007G125400 Sobic007G125400 Sobic001G179400--Sobic007G125400 Sobic004G227900 Sobic004G227900 Sobic001G179400--Sobic004G227900 Sobic007G094200 Sobic007G094200 Sobic001G179400--Sobic007G094200 Sobic002G179200 Sobic002G179200 Sobic001G179400--Sobic002G179200 Sobic002G068400--Sobic010G027700 Sobic008G035400 Sobic008G035400 Sobic002G068400--Sobic008G035400 Sobic002G068400--Sobic001G179400 Sobic002G068400--Sobic004G215000 Sobic002G068400--Sobic004G342000 Sobic010G077700 Sobic010G077700 Sobic002G068400--Sobic010G077700 Sobic002G382500 Sobic002G382500 Sobic002G068400--Sobic002G382500 Sobic002G068400--Sobic007G094200 Sobic004G045500 Sobic004G045500 Sobic002G068400--Sobic004G045500 Sobic001G438500 Sobic001G438500 Sobic004G215000--Sobic001G438500 Sobic004G215000--Sobic010G027700 Sobic004G215000--Sobic004G227900 Sobic004G215000--Sobic001G179400 Sobic004G215000--Sobic002G068400 Sobic005G201900 Sobic005G201900 Sobic004G215000--Sobic005G201900 Sobic010G065700 Sobic010G065700 Sobic004G215000--Sobic010G065700 Sobic004G215000--Sobic003G120600 Sobic008G004200 Sobic008G004200 Sobic004G215000--Sobic008G004200 Sobic005G218000 Sobic005G218000 Sobic004G342000--Sobic005G218000 Sobic001G341700 Sobic001G341700 Sobic004G342000--Sobic001G341700 Sobic004G211700 Sobic004G211700 Sobic004G342000--Sobic004G211700 Sobic002G029700 Sobic002G029700 Sobic004G342000--Sobic002G029700 Sobic007G076100 Sobic007G076100 Sobic004G342000--Sobic007G076100 Sobic008G012600 Sobic008G012600 Sobic004G342000--Sobic008G012600 Sobic002G416400 Sobic002G416400 Sobic004G342000--Sobic002G416400 Sobic006G151800 Sobic006G151800 Sobic004G342000--Sobic006G151800 Sobic006G089700 Sobic006G089700 Sobic004G342000--Sobic006G089700 Sobic003G120600--Sobic007G125400 Sobic003G004900 Sobic003G004900 Sobic003G120600--Sobic003G004900 Sobic003G120600--Sobic008G004200 Sobic003G120600--Sobic002G179200 Sobic003G120600--Sobic001G438500 Sobic003G120600--Sobic001G179400 Sobic006G092300 Sobic006G092300 Sobic003G120600--Sobic006G092300 Sobic003G120600--Sobic010G065700 Sobic003G120600--Sobic008G012600 Sobic010G027700--Sobic002G068400 Sobic010G027700--Sobic004G215000 Sobic010G027700--Sobic001G438500 Sobic010G027700--Sobic007G125400 Sobic010G027700--Sobic003G120600 Sobic010G027700--Sobic001G179400 Sobic010G027700--Sobic007G094200 Sobic002G023700 Sobic002G023700 Sobic010G027700--Sobic002G023700 Sobic009G037300 Sobic009G037300 Sobic010G027700--Sobic009G037300 Sobic007G125400--Sobic003G120600 Sobic007G125400--Sobic008G004200 Sobic001G266100 Sobic001G266100 Sobic007G125400--Sobic001G266100 Sobic007G125400--Sobic008G012600 Sobic007G125400--Sobic002G179200 Sobic003G011700 Sobic003G011700 Sobic007G125400--Sobic003G011700 Sobic007G125400--Sobic010G027700 Sobic002G047366 Sobic002G047366 Sobic007G125400--Sobic002G047366 Sobic007G125400--Sobic006G151800 Sobic004G227900--Sobic008G004200 Sobic001G334501 Sobic001G334501 Sobic004G227900--Sobic001G334501 Sobic010G053300 Sobic010G053300 Sobic004G227900--Sobic010G053300 Sobic005G089700 Sobic005G089700 Sobic004G227900--Sobic005G089700 Sobic007G000600 Sobic007G000600 Sobic004G227900--Sobic007G000600 Sobic001G366000 Sobic001G366000 Sobic004G227900--Sobic001G366000 Sobic005G200700 Sobic005G200700 Sobic004G227900--Sobic005G200700 Sobic003G016000 Sobic003G016000 Sobic004G227900--Sobic003G016000 Sobic008G032400 Sobic008G032400 Sobic004G227900--Sobic008G032400 Sobic002G032500 Sobic002G032500 Sobic007G094200--Sobic002G032500 Sobic007G094200--Sobic002G416400 Sobic008G154700 Sobic008G154700 Sobic007G094200--Sobic008G154700 Sobic003G178500 Sobic003G178500 Sobic007G094200--Sobic003G178500 Sobic007G094200--Sobic004G342000 Sobic007G094200--Sobic010G027700 Sobic007G094200--Sobic001G438500 Sobic007G094200--Sobic004G227900 Sobic006G219100 Sobic006G219100 Sobic007G094200--Sobic006G219100 Sobic002G179200--Sobic001G366000 Sobic002G179200--Sobic003G011700 Sobic001G102600 Sobic001G102600 Sobic002G179200--Sobic001G102600 Sobic002G179200--Sobic008G004200 Sobic001G511600 Sobic001G511600 Sobic002G179200--Sobic001G511600 Sobic002G179200--Sobic006G092300 Sobic010G189366 Sobic010G189366 Sobic002G179200--Sobic010G189366 Sobic002G179200--Sobic003G004900 Sobic001G472400 Sobic001G472400 Sobic002G179200--Sobic001G472400
Octagon: transcription factors


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