Gene annotation
Transcriptome id Sobic.004G215000.1
Synonym Sb04g026020
Functional annotation uncharacterized protein At4g06744 precursor, putative, expressed
UniProt C5XXN5
Pfam -
Panther DB PTHR27000 PTHR27000:SF203
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G06744 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os02g40260.1 : uncharacterized protein At4g06744 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a031979 , Zm00025a021167 , Zm00025a016006
Brachypodium KQK00346 , KQK00349
Barley HORVU6Hr1G057490.2 , HORVU6Hr1G057490.1 , HORVU0Hr1G018590.1 , HORVU0Hr1G018590.2
Wheat -
Populus -


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cDNA sequences
Sobic.004G215000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G438500 POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
3 Sobic.004G227900 expansin precursor, putative, expressed -
4 Sobic.001G179400 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
5 Sobic.002G068400 - -
6 Sobic.005G201900 OsFBX230 - F-box domain containing protein, expressed -
7 Sobic.010G065700 expressed protein -
8 Sobic.003G120600 transmembrane protein 136, putative, expressed -
9 Sobic.008G004200 MYB family transcription factor, putative, expressed -
10 Sobic.004G062100 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL5 - SBP-box gene family member, expressed -
11 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
12 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
13 Sobic.010G077700 ZOS6-02 - C2H2 zinc finger protein, expressed -
14 Sobic.002G047366 - -
15 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
16 Sobic.005G089700 expressed protein -
17 Sobic.001G438400 POEI16 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
18 Sobic.001G459700 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
19 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
20 Sobic.006G151800 OsRR5 type-A response regulator, expressed K14492: two-component response regulator ARR-A family


Gene co-expression network
sample Sobic004G215000 Sobic004G215000 Sobic001G438500 Sobic001G438500 Sobic004G215000--Sobic001G438500 Sobic010G027700 Sobic010G027700 Sobic004G215000--Sobic010G027700 Sobic004G227900 Sobic004G227900 Sobic004G215000--Sobic004G227900 Sobic001G179400 Sobic001G179400 Sobic004G215000--Sobic001G179400 Sobic002G068400 Sobic002G068400 Sobic004G215000--Sobic002G068400 Sobic005G201900 Sobic005G201900 Sobic004G215000--Sobic005G201900 Sobic010G065700 Sobic010G065700 Sobic004G215000--Sobic010G065700 Sobic003G120600 Sobic003G120600 Sobic004G215000--Sobic003G120600 Sobic008G004200 Sobic008G004200 Sobic004G215000--Sobic008G004200 Sobic004G062100 Sobic004G062100 Sobic001G438500--Sobic004G062100 Sobic010G215700 Sobic010G215700 Sobic001G438500--Sobic010G215700 Sobic001G438500--Sobic004G215000 Sobic001G438500--Sobic010G065700 Sobic005G042200 Sobic005G042200 Sobic001G438500--Sobic005G042200 Sobic001G334501 Sobic001G334501 Sobic001G438500--Sobic001G334501 Sobic002G047366 Sobic002G047366 Sobic001G438500--Sobic002G047366 Sobic001G438500--Sobic008G004200 Sobic002G251200 Sobic002G251200 Sobic001G438500--Sobic002G251200 Sobic010G027700--Sobic002G068400 Sobic010G027700--Sobic004G215000 Sobic010G027700--Sobic001G438500 Sobic007G125400 Sobic007G125400 Sobic010G027700--Sobic007G125400 Sobic010G027700--Sobic003G120600 Sobic010G027700--Sobic001G179400 Sobic007G094200 Sobic007G094200 Sobic010G027700--Sobic007G094200 Sobic002G023700 Sobic002G023700 Sobic010G027700--Sobic002G023700 Sobic009G037300 Sobic009G037300 Sobic010G027700--Sobic009G037300 Sobic004G227900--Sobic008G004200 Sobic004G227900--Sobic001G334501 Sobic010G053300 Sobic010G053300 Sobic004G227900--Sobic010G053300 Sobic005G089700 Sobic005G089700 Sobic004G227900--Sobic005G089700 Sobic007G000600 Sobic007G000600 Sobic004G227900--Sobic007G000600 Sobic001G366000 Sobic001G366000 Sobic004G227900--Sobic001G366000 Sobic005G200700 Sobic005G200700 Sobic004G227900--Sobic005G200700 Sobic003G016000 Sobic003G016000 Sobic004G227900--Sobic003G016000 Sobic008G032400 Sobic008G032400 Sobic004G227900--Sobic008G032400 Sobic001G179400--Sobic002G068400 Sobic001G179400--Sobic004G215000 Sobic004G342000 Sobic004G342000 Sobic001G179400--Sobic004G342000 Sobic001G179400--Sobic003G120600 Sobic001G179400--Sobic010G027700 Sobic001G179400--Sobic007G125400 Sobic001G179400--Sobic004G227900 Sobic001G179400--Sobic007G094200 Sobic002G179200 Sobic002G179200 Sobic001G179400--Sobic002G179200 Sobic002G068400--Sobic010G027700 Sobic008G035400 Sobic008G035400 Sobic002G068400--Sobic008G035400 Sobic002G068400--Sobic001G179400 Sobic002G068400--Sobic004G215000 Sobic002G068400--Sobic004G342000 Sobic010G077700 Sobic010G077700 Sobic002G068400--Sobic010G077700 Sobic002G382500 Sobic002G382500 Sobic002G068400--Sobic002G382500 Sobic002G068400--Sobic007G094200 Sobic004G045500 Sobic004G045500 Sobic002G068400--Sobic004G045500 Sobic005G201900--Sobic005G089700 Sobic005G201900--Sobic001G334501 Sobic001G459700 Sobic001G459700 Sobic005G201900--Sobic001G459700 Sobic005G201900--Sobic008G032400 Sobic001G133200 Sobic001G133200 Sobic005G201900--Sobic001G133200 Sobic010G065700--Sobic001G438500 Sobic010G065700--Sobic004G215000 Sobic010G065700--Sobic003G120600 Sobic010G065700--Sobic004G062100 Sobic010G065700--Sobic010G027700 Sobic010G065700--Sobic008G004200 Sobic010G065700--Sobic001G179400 Sobic010G065700--Sobic004G227900 Sobic005G158400 Sobic005G158400 Sobic010G065700--Sobic005G158400 Sobic003G120600--Sobic007G125400 Sobic003G004900 Sobic003G004900 Sobic003G120600--Sobic003G004900 Sobic003G120600--Sobic008G004200 Sobic003G120600--Sobic002G179200 Sobic003G120600--Sobic001G438500 Sobic003G120600--Sobic001G179400 Sobic006G092300 Sobic006G092300 Sobic003G120600--Sobic006G092300 Sobic003G120600--Sobic010G065700 Sobic008G012600 Sobic008G012600 Sobic003G120600--Sobic008G012600 Sobic008G004200--Sobic001G334501 Sobic008G004200--Sobic004G227900 Sobic008G004200--Sobic005G200700 Sobic001G491400 Sobic001G491400 Sobic008G004200--Sobic001G491400 Sobic010G049600 Sobic010G049600 Sobic008G004200--Sobic010G049600 Sobic008G004200--Sobic010G215700 Sobic008G004200--Sobic001G366000 Sobic002G399600 Sobic002G399600 Sobic008G004200--Sobic002G399600 Sobic002G410600 Sobic002G410600 Sobic008G004200--Sobic002G410600
Octagon: transcription factors


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