Gene annotation
Transcriptome id Sobic.003G120600.1
Synonym Sb03g010190
Functional annotation transmembrane protein 136, putative, expressed
UniProt C5XGG8
Pfam PF03798
Panther DB PTHR31898
NCBI CDD KOG4474; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G35180 : TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
RAP-DB (Rice) LOC_Os01g15770.1 : transmembrane protein 136, putative, expressed
MaizeGDB (Corn) Zm00025a035286
Brachypodium KQK03748 , KQK03742 , PNT70312
Barley HORVU3Hr1G036640.4 , HORVU3Hr1G036640.2 , HORVU3Hr1G036640.1 , HORVU3Hr1G036600.2 , HORVU3Hr1G036600.3 , HORVU3Hr1G036600.1 , HORVU3Hr1G036600.6 , HORVU3Hr1G036600.7 , HORVU3Hr1G036600.4 , HORVU3Hr1G036600.5
Wheat TraesCS3A02G179400 , TraesCS3D02G184400 , TraesCS3A02G179500 , TraesCS3B02G209100 , TraesCS3D02G184300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G125400 lysM domain containing protein, putative -
2 Sobic.003G004900 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
3 Sobic.008G004200 MYB family transcription factor, putative, expressed -
4 Sobic.002G179200 DUF623 domain containing protein, expressed -
5 Sobic.001G438500 POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.001G179400 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
7 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
8 Sobic.010G065700 expressed protein -
9 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
10 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
11 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
12 Sobic.007G180700 LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.004G227900 expansin precursor, putative, expressed -
14 Sobic.001G102600 regulatory protein, putative, expressed -
15 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
16 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -
17 Sobic.004G215000 uncharacterized protein At4g06744 precursor, putative, expressed -
18 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
19 Sobic.007G153100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659906)@expressed protein -
20 Sobic.006G137000 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G


Gene co-expression network
sample Sobic003G120600 Sobic003G120600 Sobic007G125400 Sobic007G125400 Sobic003G120600--Sobic007G125400 Sobic003G004900 Sobic003G004900 Sobic003G120600--Sobic003G004900 Sobic008G004200 Sobic008G004200 Sobic003G120600--Sobic008G004200 Sobic002G179200 Sobic002G179200 Sobic003G120600--Sobic002G179200 Sobic001G438500 Sobic001G438500 Sobic003G120600--Sobic001G438500 Sobic001G179400 Sobic001G179400 Sobic003G120600--Sobic001G179400 Sobic006G092300 Sobic006G092300 Sobic003G120600--Sobic006G092300 Sobic010G065700 Sobic010G065700 Sobic003G120600--Sobic010G065700 Sobic008G012600 Sobic008G012600 Sobic003G120600--Sobic008G012600 Sobic007G125400--Sobic003G120600 Sobic007G125400--Sobic008G004200 Sobic001G266100 Sobic001G266100 Sobic007G125400--Sobic001G266100 Sobic007G125400--Sobic008G012600 Sobic007G125400--Sobic002G179200 Sobic003G011700 Sobic003G011700 Sobic007G125400--Sobic003G011700 Sobic010G027700 Sobic010G027700 Sobic007G125400--Sobic010G027700 Sobic002G047366 Sobic002G047366 Sobic007G125400--Sobic002G047366 Sobic006G151800 Sobic006G151800 Sobic007G125400--Sobic006G151800 Sobic007G180700 Sobic007G180700 Sobic003G004900--Sobic007G180700 Sobic006G267400 Sobic006G267400 Sobic003G004900--Sobic006G267400 Sobic001G102600 Sobic001G102600 Sobic003G004900--Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic003G004900--Sobic010G189366 Sobic002G173300 Sobic002G173300 Sobic003G004900--Sobic002G173300 Sobic004G349150 Sobic004G349150 Sobic003G004900--Sobic004G349150 Sobic004G001700 Sobic004G001700 Sobic003G004900--Sobic004G001700 Sobic006G098300 Sobic006G098300 Sobic003G004900--Sobic006G098300 Sobic006G137000 Sobic006G137000 Sobic003G004900--Sobic006G137000 Sobic001G334501 Sobic001G334501 Sobic008G004200--Sobic001G334501 Sobic004G227900 Sobic004G227900 Sobic008G004200--Sobic004G227900 Sobic005G200700 Sobic005G200700 Sobic008G004200--Sobic005G200700 Sobic001G491400 Sobic001G491400 Sobic008G004200--Sobic001G491400 Sobic010G049600 Sobic010G049600 Sobic008G004200--Sobic010G049600 Sobic010G215700 Sobic010G215700 Sobic008G004200--Sobic010G215700 Sobic001G366000 Sobic001G366000 Sobic008G004200--Sobic001G366000 Sobic002G399600 Sobic002G399600 Sobic008G004200--Sobic002G399600 Sobic002G410600 Sobic002G410600 Sobic008G004200--Sobic002G410600 Sobic002G179200--Sobic001G366000 Sobic002G179200--Sobic003G011700 Sobic002G179200--Sobic001G102600 Sobic002G179200--Sobic008G004200 Sobic001G511600 Sobic001G511600 Sobic002G179200--Sobic001G511600 Sobic002G179200--Sobic006G092300 Sobic002G179200--Sobic010G189366 Sobic002G179200--Sobic003G004900 Sobic001G472400 Sobic001G472400 Sobic002G179200--Sobic001G472400 Sobic004G062100 Sobic004G062100 Sobic001G438500--Sobic004G062100 Sobic001G438500--Sobic010G215700 Sobic004G215000 Sobic004G215000 Sobic001G438500--Sobic004G215000 Sobic001G438500--Sobic010G065700 Sobic005G042200 Sobic005G042200 Sobic001G438500--Sobic005G042200 Sobic001G438500--Sobic001G334501 Sobic001G438500--Sobic002G047366 Sobic001G438500--Sobic008G004200 Sobic002G251200 Sobic002G251200 Sobic001G438500--Sobic002G251200 Sobic002G068400 Sobic002G068400 Sobic001G179400--Sobic002G068400 Sobic001G179400--Sobic004G215000 Sobic004G342000 Sobic004G342000 Sobic001G179400--Sobic004G342000 Sobic001G179400--Sobic003G120600 Sobic001G179400--Sobic010G027700 Sobic001G179400--Sobic007G125400 Sobic001G179400--Sobic004G227900 Sobic007G094200 Sobic007G094200 Sobic001G179400--Sobic007G094200 Sobic001G179400--Sobic002G179200 Sobic006G079500 Sobic006G079500 Sobic006G092300--Sobic006G079500 Sobic006G092300--Sobic001G102600 Sobic006G092300--Sobic010G189366 Sobic006G092300--Sobic010G215700 Sobic007G206000 Sobic007G206000 Sobic006G092300--Sobic007G206000 Sobic006G092300--Sobic004G349150 Sobic005G226500 Sobic005G226500 Sobic006G092300--Sobic005G226500 Sobic006G092300--Sobic001G491400 Sobic006G092300--Sobic005G200700 Sobic010G065700--Sobic001G438500 Sobic010G065700--Sobic004G215000 Sobic010G065700--Sobic003G120600 Sobic010G065700--Sobic004G062100 Sobic010G065700--Sobic010G027700 Sobic010G065700--Sobic008G004200 Sobic010G065700--Sobic001G179400 Sobic010G065700--Sobic004G227900 Sobic005G158400 Sobic005G158400 Sobic010G065700--Sobic005G158400 Sobic006G160800 Sobic006G160800 Sobic008G012600--Sobic006G160800 Sobic008G012600--Sobic001G266100 Sobic005G110900 Sobic005G110900 Sobic008G012600--Sobic005G110900 Sobic008G012600--Sobic010G049600 Sobic008G012600--Sobic001G491400 Sobic005G218000 Sobic005G218000 Sobic008G012600--Sobic005G218000 Sobic008G012600--Sobic010G215700 Sobic008G012600--Sobic008G004200 Sobic009G254500 Sobic009G254500 Sobic008G012600--Sobic009G254500
Octagon: transcription factors


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