Gene annotation
Transcriptome id Sobic.001G102600.1
Synonym Sb01g009150
Functional annotation regulatory protein, putative, expressed
UniProt C5WLY3
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF805
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28710 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os03g52160.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a016876
Brachypodium KQK13372
Barley HORVU4Hr1G010400.2 , HORVU4Hr1G010400.1 , HORVU4Hr1G010350.3 , HORVU4Hr1G010350.2 , HORVU4Hr1G010350.1 , HORVU4Hr1G010350.4
Wheat TraesCS4B02G062700 , TraesCS4D02G061700 , TraesCS4A02G252600 , TraesCS4D02G061500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G189366 - K01674: carbonic anhydrase
2 Sobic.004G349150 - -
3 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -
4 Sobic.004G001700 POEI25 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
5 Sobic.010G187400 ABC-2 type transporter domain containing protein, expressed -
6 Sobic.003G004900 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
7 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -
8 Sobic.008G032400 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.001G472400 pumilio domain-containing protein PPD1, putative, expressed -
10 Sobic.006G006900 expressed protein -
11 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
13 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
14 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
15 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
16 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
17 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G102600 Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic001G102600--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic001G102600--Sobic004G349150 Sobic006G267400 Sobic006G267400 Sobic001G102600--Sobic006G267400 Sobic004G001700 Sobic004G001700 Sobic001G102600--Sobic004G001700 Sobic010G187400 Sobic010G187400 Sobic001G102600--Sobic010G187400 Sobic003G004900 Sobic003G004900 Sobic001G102600--Sobic003G004900 Sobic006G098300 Sobic006G098300 Sobic001G102600--Sobic006G098300 Sobic008G032400 Sobic008G032400 Sobic001G102600--Sobic008G032400 Sobic001G472400 Sobic001G472400 Sobic001G102600--Sobic001G472400 Sobic010G189366--Sobic004G349150 Sobic010G189366--Sobic001G102600 Sobic010G189366--Sobic004G001700 Sobic010G189366--Sobic010G187400 Sobic010G189366--Sobic008G032400 Sobic006G006900 Sobic006G006900 Sobic010G189366--Sobic006G006900 Sobic002G270400 Sobic002G270400 Sobic010G189366--Sobic002G270400 Sobic001G133200 Sobic001G133200 Sobic010G189366--Sobic001G133200 Sobic004G349150--Sobic010G189366 Sobic004G349150--Sobic010G187400 Sobic004G349150--Sobic004G001700 Sobic004G349150--Sobic008G032400 Sobic004G349150--Sobic006G006900 Sobic004G349150--Sobic002G270400 Sobic003G263800 Sobic003G263800 Sobic004G349150--Sobic003G263800 Sobic002G427550 Sobic002G427550 Sobic004G349150--Sobic002G427550 Sobic004G349150--Sobic001G133200 Sobic006G267400--Sobic006G098300 Sobic007G180700 Sobic007G180700 Sobic006G267400--Sobic007G180700 Sobic006G267400--Sobic002G270400 Sobic006G267400--Sobic004G349150 Sobic002G399600 Sobic002G399600 Sobic006G267400--Sobic002G399600 Sobic006G267400--Sobic010G187400 Sobic006G267400--Sobic004G001700 Sobic006G267400--Sobic006G006900 Sobic006G267400--Sobic008G032400 Sobic004G001700--Sobic010G187400 Sobic004G001700--Sobic006G006900 Sobic004G001700--Sobic002G270400 Sobic004G001700--Sobic008G032400 Sobic007G098600 Sobic007G098600 Sobic004G001700--Sobic007G098600 Sobic004G001700--Sobic002G427550 Sobic004G001700--Sobic001G133200 Sobic010G187400--Sobic006G006900 Sobic007G037400 Sobic007G037400 Sobic010G187400--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic010G187400--Sobic007G107500 Sobic010G187400--Sobic007G098600 Sobic010G187400--Sobic002G270400 Sobic010G187400--Sobic008G032400 Sobic010G187400--Sobic001G133200 Sobic003G004900--Sobic007G180700 Sobic003G004900--Sobic006G267400 Sobic003G004900--Sobic001G102600 Sobic003G004900--Sobic010G189366 Sobic002G173300 Sobic002G173300 Sobic003G004900--Sobic002G173300 Sobic003G004900--Sobic004G349150 Sobic003G004900--Sobic004G001700 Sobic003G004900--Sobic006G098300 Sobic006G137000 Sobic006G137000 Sobic003G004900--Sobic006G137000 Sobic006G098300--Sobic002G270400 Sobic006G098300--Sobic006G006900 Sobic006G098300--Sobic007G098600 Sobic006G098300--Sobic001G133200 Sobic008G032400--Sobic006G006900 Sobic008G032400--Sobic003G263800 Sobic008G032400--Sobic002G427550 Sobic008G032400--Sobic001G133200 Sobic001G472400--Sobic010G189366 Sobic001G472400--Sobic001G102600 Sobic001G472400--Sobic004G349150 Sobic001G472400--Sobic004G001700 Sobic001G472400--Sobic006G267400 Sobic001G472400--Sobic010G187400 Sobic010G259400 Sobic010G259400 Sobic001G472400--Sobic010G259400 Sobic004G202800 Sobic004G202800 Sobic001G472400--Sobic004G202800 Sobic001G472400--Sobic008G032400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.