Gene annotation
Transcriptome id Sobic.001G472400.2
Synonym PUM5, APUM5, Sb01g044260
Functional annotation pumilio domain-containing protein PPD1, putative, expressed
UniProt A0A1Z5SAY4
Pfam -
Panther DB PTHR12537 PTHR12537:SF68
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20250 : pumilio 5
RAP-DB (Rice) LOC_Os08g40830.3 : pumilio domain-containing protein PPD1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G189366 - K01674: carbonic anhydrase
2 Sobic.001G102600 regulatory protein, putative, expressed -
3 Sobic.004G349150 - -
4 Sobic.004G001700 POEI25 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
5 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -
6 Sobic.010G187400 ABC-2 type transporter domain containing protein, expressed -
7 Sobic.010G259400 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
8 Sobic.004G202800 glycosyl hydrolase family 5 protein, putative, expressed -
9 Sobic.008G032400 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.006G006900 expressed protein -
11 Sobic.005G226500 thaumatin family domain containing protein, expressed -
12 Sobic.006G006800 expressed protein -
13 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -
14 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.003G263800 LTPL150 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.003G088200 dihydroflavonol-4-reductase, putative, expressed -
17 Sobic.007G098600 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G472400 Sobic001G472400 Sobic010G189366 Sobic010G189366 Sobic001G472400--Sobic010G189366 Sobic001G102600 Sobic001G102600 Sobic001G472400--Sobic001G102600 Sobic004G349150 Sobic004G349150 Sobic001G472400--Sobic004G349150 Sobic004G001700 Sobic004G001700 Sobic001G472400--Sobic004G001700 Sobic006G267400 Sobic006G267400 Sobic001G472400--Sobic006G267400 Sobic010G187400 Sobic010G187400 Sobic001G472400--Sobic010G187400 Sobic010G259400 Sobic010G259400 Sobic001G472400--Sobic010G259400 Sobic004G202800 Sobic004G202800 Sobic001G472400--Sobic004G202800 Sobic008G032400 Sobic008G032400 Sobic001G472400--Sobic008G032400 Sobic010G189366--Sobic004G349150 Sobic010G189366--Sobic001G102600 Sobic010G189366--Sobic004G001700 Sobic010G189366--Sobic010G187400 Sobic010G189366--Sobic008G032400 Sobic006G006900 Sobic006G006900 Sobic010G189366--Sobic006G006900 Sobic002G270400 Sobic002G270400 Sobic010G189366--Sobic002G270400 Sobic001G133200 Sobic001G133200 Sobic010G189366--Sobic001G133200 Sobic001G102600--Sobic010G189366 Sobic001G102600--Sobic004G349150 Sobic001G102600--Sobic006G267400 Sobic001G102600--Sobic004G001700 Sobic001G102600--Sobic010G187400 Sobic003G004900 Sobic003G004900 Sobic001G102600--Sobic003G004900 Sobic006G098300 Sobic006G098300 Sobic001G102600--Sobic006G098300 Sobic001G102600--Sobic008G032400 Sobic001G102600--Sobic001G472400 Sobic004G349150--Sobic010G189366 Sobic004G349150--Sobic010G187400 Sobic004G349150--Sobic004G001700 Sobic004G349150--Sobic008G032400 Sobic004G349150--Sobic006G006900 Sobic004G349150--Sobic002G270400 Sobic003G263800 Sobic003G263800 Sobic004G349150--Sobic003G263800 Sobic002G427550 Sobic002G427550 Sobic004G349150--Sobic002G427550 Sobic004G349150--Sobic001G133200 Sobic004G001700--Sobic010G187400 Sobic004G001700--Sobic006G006900 Sobic004G001700--Sobic002G270400 Sobic004G001700--Sobic008G032400 Sobic007G098600 Sobic007G098600 Sobic004G001700--Sobic007G098600 Sobic004G001700--Sobic002G427550 Sobic004G001700--Sobic001G133200 Sobic006G267400--Sobic006G098300 Sobic007G180700 Sobic007G180700 Sobic006G267400--Sobic007G180700 Sobic006G267400--Sobic002G270400 Sobic006G267400--Sobic004G349150 Sobic002G399600 Sobic002G399600 Sobic006G267400--Sobic002G399600 Sobic006G267400--Sobic010G187400 Sobic006G267400--Sobic004G001700 Sobic006G267400--Sobic006G006900 Sobic006G267400--Sobic008G032400 Sobic010G187400--Sobic006G006900 Sobic007G037400 Sobic007G037400 Sobic010G187400--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic010G187400--Sobic007G107500 Sobic010G187400--Sobic007G098600 Sobic010G187400--Sobic002G270400 Sobic010G187400--Sobic008G032400 Sobic010G187400--Sobic001G133200 Sobic009G075000 Sobic009G075000 Sobic010G259400--Sobic009G075000 Sobic003G088200 Sobic003G088200 Sobic010G259400--Sobic003G088200 Sobic010G259400--Sobic003G263800 Sobic010G259400--Sobic001G133200 Sobic006G006800 Sobic006G006800 Sobic004G202800--Sobic006G006800 Sobic010G236000 Sobic010G236000 Sobic004G202800--Sobic010G236000 Sobic004G202800--Sobic008G032400 Sobic004G202800--Sobic006G006900 Sobic004G202800--Sobic003G088200 Sobic004G202800--Sobic010G187400 Sobic004G202800--Sobic003G263800 Sobic004G202800--Sobic001G133200 Sobic008G032400--Sobic006G006900 Sobic008G032400--Sobic003G263800 Sobic008G032400--Sobic002G427550 Sobic008G032400--Sobic001G133200
Octagon: transcription factors


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