Gene annotation
Transcriptome id Sobic.005G201900.2
Synonym Sb05g025760
Functional annotation OsFBX230 - F-box domain containing protein, expressed
UniProt A0A1Z5RK17
Pfam PF08268 PF00646
Panther DB PTHR32133 PTHR32133:SF146
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G16210 : F-box family protein
RAP-DB (Rice) LOC_Os07g13890.1 : OsFBX230 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G089700 expressed protein -
2 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
3 Sobic.001G459700 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
4 Sobic.008G032400 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
6 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
7 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
8 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
9 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
10 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
11 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
12 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
13 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
14 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
15 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
16 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
17 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic005G201900 Sobic005G201900 Sobic005G089700 Sobic005G089700 Sobic005G201900--Sobic005G089700 Sobic001G334501 Sobic001G334501 Sobic005G201900--Sobic001G334501 Sobic001G459700 Sobic001G459700 Sobic005G201900--Sobic001G459700 Sobic008G032400 Sobic008G032400 Sobic005G201900--Sobic008G032400 Sobic001G133200 Sobic001G133200 Sobic005G201900--Sobic001G133200 Sobic005G089700--Sobic001G133200 Sobic002G399600 Sobic002G399600 Sobic001G334501--Sobic002G399600 Sobic002G270400 Sobic002G270400 Sobic001G334501--Sobic002G270400 Sobic007G037400 Sobic007G037400 Sobic001G334501--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic001G334501--Sobic007G107500 Sobic010G187400 Sobic010G187400 Sobic001G334501--Sobic010G187400 Sobic006G006900 Sobic006G006900 Sobic001G334501--Sobic006G006900 Sobic005G226500 Sobic005G226500 Sobic001G334501--Sobic005G226500 Sobic007G098600 Sobic007G098600 Sobic001G334501--Sobic007G098600 Sobic001G334501--Sobic001G133200 Sobic001G459700--Sobic007G037400 Sobic001G459700--Sobic007G107500 Sobic001G459700--Sobic002G399600 Sobic001G459700--Sobic006G006900 Sobic001G459700--Sobic007G098600 Sobic001G459700--Sobic001G133200 Sobic008G032400--Sobic006G006900 Sobic003G263800 Sobic003G263800 Sobic008G032400--Sobic003G263800 Sobic002G427550 Sobic002G427550 Sobic008G032400--Sobic002G427550 Sobic008G032400--Sobic001G133200 Sobic001G133200--Sobic001G133200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.