Gene annotation
Transcriptome id Sobic.004G062100.1
Synonym SPL8, SbSBP9, Sb04g005180
Functional annotation A tissue specific expression in primordial inflorescences (PubMedID : 27501690)
OsSPL5 - SBP-box gene family member, expressed
UniProt A0A1Z5RL61
Pfam PF03110
Panther DB PTHR31251 PTHR31251:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005634; nucleus GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G02065 : squamosa promoter binding protein-like 8
RAP-DB (Rice) LOC_Os02g08070.1 : OsSPL5 - SBP-box gene family member, expressed
MaizeGDB (Corn) Zm00025a034758 , Zm00025a057255 , Zm00025a034756 , Zm00025a042001 , Zm00025a019166 , Zm00025a047584 , Zm00025a026243 , Zm00025a014306 , Zm00025a009466 , Zm00025a051683
Brachypodium PNT66007 , KQK16912
Barley HORVU7Hr1G110980.3 , HORVU7Hr1G110980.6 , HORVU7Hr1G110980.5 , HORVU7Hr1G110980.2 , HORVU7Hr1G110980.1 , HORVU6Hr1G030490.1 , HORVU6Hr1G030490.2 , HORVU6Hr1G030490.3 , HORVU6Hr1G030490.4 , HORVU7Hr1G110980.4
Wheat TraesCS7B02G402300 , TraesCS6A02G152000 , TraesCS7B02G402200 , TraesCS7D02G482200 , TraesCS2A02G502300 , TraesCS7D02G482500 , TraesCS7A02G494800 , TraesCS7B02G402400 , TraesCS7A02G494900 , TraesCS6B02G180300 , TraesCS7D02G482300 , TraesCS7A02G495000 , TraesCS7D02G482400 , TraesCS6D02G142100 , TraesCS7A02G495100 , TraesCS7A02G495100 , TraesCS2B02G530400 , TraesCS2D02G502900 , TraesCS2D02G502900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
2 Sobic.001G438500 POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
3 Sobic.002G251200 dihydroflavonol-4-reductase, putative, expressed -
4 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
5 Sobic.001G438400 POEI16 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -
7 Sobic.005G089700 expressed protein -
8 Sobic.007G037400 expressed protein -
9 Sobic.006G006900 expressed protein -
10 Sobic.007G000600 CRP2 - Cysteine-rich family protein precursor, expressed -
11 Sobic.007G098600 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
13 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
14 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
15 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
16 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
17 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G062100 Sobic004G062100 Sobic010G215700 Sobic010G215700 Sobic004G062100--Sobic010G215700 Sobic001G438500 Sobic001G438500 Sobic004G062100--Sobic001G438500 Sobic002G251200 Sobic002G251200 Sobic004G062100--Sobic002G251200 Sobic001G334501 Sobic001G334501 Sobic004G062100--Sobic001G334501 Sobic001G438400 Sobic001G438400 Sobic004G062100--Sobic001G438400 Sobic006G267400 Sobic006G267400 Sobic004G062100--Sobic006G267400 Sobic005G089700 Sobic005G089700 Sobic004G062100--Sobic005G089700 Sobic007G037400 Sobic007G037400 Sobic004G062100--Sobic007G037400 Sobic006G006900 Sobic006G006900 Sobic004G062100--Sobic006G006900 Sobic010G215700--Sobic002G251200 Sobic005G226500 Sobic005G226500 Sobic010G215700--Sobic005G226500 Sobic010G215700--Sobic001G334501 Sobic002G399600 Sobic002G399600 Sobic010G215700--Sobic002G399600 Sobic010G215700--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic010G215700--Sobic007G107500 Sobic010G215700--Sobic006G006900 Sobic002G270400 Sobic002G270400 Sobic010G215700--Sobic002G270400 Sobic007G098600 Sobic007G098600 Sobic010G215700--Sobic007G098600 Sobic001G438500--Sobic004G062100 Sobic001G438500--Sobic010G215700 Sobic004G215000 Sobic004G215000 Sobic001G438500--Sobic004G215000 Sobic010G065700 Sobic010G065700 Sobic001G438500--Sobic010G065700 Sobic005G042200 Sobic005G042200 Sobic001G438500--Sobic005G042200 Sobic001G438500--Sobic001G334501 Sobic002G047366 Sobic002G047366 Sobic001G438500--Sobic002G047366 Sobic008G004200 Sobic008G004200 Sobic001G438500--Sobic008G004200 Sobic001G438500--Sobic002G251200 Sobic002G251200--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic002G251200--Sobic001G133200 Sobic001G334501--Sobic002G399600 Sobic001G334501--Sobic002G270400 Sobic001G334501--Sobic007G037400 Sobic001G334501--Sobic007G107500 Sobic010G187400 Sobic010G187400 Sobic001G334501--Sobic010G187400 Sobic001G334501--Sobic006G006900 Sobic001G334501--Sobic005G226500 Sobic001G334501--Sobic007G098600 Sobic001G334501--Sobic001G133200 Sobic001G438400--Sobic007G037400 Sobic001G438400--Sobic007G107500 Sobic001G438400--Sobic006G006900 Sobic001G438400--Sobic007G098600 Sobic001G438400--Sobic001G133200 Sobic006G098300 Sobic006G098300 Sobic006G267400--Sobic006G098300 Sobic007G180700 Sobic007G180700 Sobic006G267400--Sobic007G180700 Sobic006G267400--Sobic002G270400 Sobic004G349150 Sobic004G349150 Sobic006G267400--Sobic004G349150 Sobic006G267400--Sobic002G399600 Sobic006G267400--Sobic010G187400 Sobic004G001700 Sobic004G001700 Sobic006G267400--Sobic004G001700 Sobic006G267400--Sobic006G006900 Sobic008G032400 Sobic008G032400 Sobic006G267400--Sobic008G032400 Sobic005G089700--Sobic001G133200 Sobic007G037400--Sobic007G107500 Sobic007G037400--Sobic006G006900 Sobic007G037400--Sobic007G098600 Sobic007G037400--Sobic001G133200 Sobic006G006900--Sobic007G098600 Sobic006G006900--Sobic001G133200
Octagon: transcription factors


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