Gene annotation
Transcriptome id Sobic.002G382500.1
Synonym Sb02g039890
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt C5X2K4
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF126
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39700 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os03g26650.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006057
Brachypodium KQK15107 , PNT64459 , KQJ90006 , KQK21477
Barley HORVU5Hr1G057730.1
Wheat TraesCS2A02G160700 , TraesCS2B02G186900 , TraesCS2D02G168000 , TraesCS5A02G191400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
2 Sobic.002G068400 - -
3 Sobic.008G035400 stress responsive A/B Barrel domain containing protein, expressed -
4 Sobic.003G339600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
5 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.001G488400 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659850)@bHLH family protein, putative, expressed -
7 Sobic.006G219100 expressed protein -
8 Sobic.009G037300 transferase family protein, putative, expressed -
9 Sobic.002G023700 expressed protein -
10 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
11 Sobic.001G179400 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
12 Sobic.004G215000 uncharacterized protein At4g06744 precursor, putative, expressed -
13 Sobic.002G229700 expressed protein -
14 Sobic.003G041801 - -
15 Sobic.004G045500 phytosulfokine receptor precursor, putative, expressed -
16 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.002G186800 strictosidine synthase, putative, expressed -
18 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
19 Sobic.007G094200 expressed protein -
20 Sobic.004G248100 endoglucanase, putative, expressed -


Gene co-expression network
sample Sobic002G382500 Sobic002G382500 Sobic010G027700 Sobic010G027700 Sobic002G382500--Sobic010G027700 Sobic002G068400 Sobic002G068400 Sobic002G382500--Sobic002G068400 Sobic008G035400 Sobic008G035400 Sobic002G382500--Sobic008G035400 Sobic003G339600 Sobic003G339600 Sobic002G382500--Sobic003G339600 Sobic006G044200 Sobic006G044200 Sobic002G382500--Sobic006G044200 Sobic001G488400 Sobic001G488400 Sobic002G382500--Sobic001G488400 Sobic006G219100 Sobic006G219100 Sobic002G382500--Sobic006G219100 Sobic009G037300 Sobic009G037300 Sobic002G382500--Sobic009G037300 Sobic002G023700 Sobic002G023700 Sobic002G382500--Sobic002G023700 Sobic010G027700--Sobic002G068400 Sobic004G215000 Sobic004G215000 Sobic010G027700--Sobic004G215000 Sobic001G438500 Sobic001G438500 Sobic010G027700--Sobic001G438500 Sobic007G125400 Sobic007G125400 Sobic010G027700--Sobic007G125400 Sobic003G120600 Sobic003G120600 Sobic010G027700--Sobic003G120600 Sobic001G179400 Sobic001G179400 Sobic010G027700--Sobic001G179400 Sobic007G094200 Sobic007G094200 Sobic010G027700--Sobic007G094200 Sobic010G027700--Sobic002G023700 Sobic010G027700--Sobic009G037300 Sobic002G068400--Sobic010G027700 Sobic002G068400--Sobic008G035400 Sobic002G068400--Sobic001G179400 Sobic002G068400--Sobic004G215000 Sobic004G342000 Sobic004G342000 Sobic002G068400--Sobic004G342000 Sobic010G077700 Sobic010G077700 Sobic002G068400--Sobic010G077700 Sobic002G068400--Sobic002G382500 Sobic002G068400--Sobic007G094200 Sobic004G045500 Sobic004G045500 Sobic002G068400--Sobic004G045500 Sobic008G035400--Sobic002G068400 Sobic008G035400--Sobic006G044200 Sobic008G035400--Sobic010G027700 Sobic008G035400--Sobic002G382500 Sobic008G035400--Sobic001G179400 Sobic004G248100 Sobic004G248100 Sobic008G035400--Sobic004G248100 Sobic008G035400--Sobic004G215000 Sobic008G035400--Sobic001G488400 Sobic008G035400--Sobic010G077700 Sobic010G020600 Sobic010G020600 Sobic003G339600--Sobic010G020600 Sobic003G300400 Sobic003G300400 Sobic003G339600--Sobic003G300400 Sobic009G254500 Sobic009G254500 Sobic003G339600--Sobic009G254500 Sobic003G339600--Sobic004G248100 Sobic002G229700 Sobic002G229700 Sobic003G339600--Sobic002G229700 Sobic004G283800 Sobic004G283800 Sobic003G339600--Sobic004G283800 Sobic003G309400 Sobic003G309400 Sobic003G339600--Sobic003G309400 Sobic003G339600--Sobic002G382500 Sobic007G189400 Sobic007G189400 Sobic003G339600--Sobic007G189400 Sobic006G044200--Sobic008G035400 Sobic006G044200--Sobic001G488400 Sobic005G188500 Sobic005G188500 Sobic006G044200--Sobic005G188500 Sobic006G044200--Sobic004G248100 Sobic006G032800 Sobic006G032800 Sobic006G044200--Sobic006G032800 Sobic003G116100 Sobic003G116100 Sobic006G044200--Sobic003G116100 Sobic006G044200--Sobic007G189400 Sobic006G044200--Sobic002G382500 Sobic006G044200--Sobic002G068400 Sobic001G488400--Sobic005G188500 Sobic001G488400--Sobic010G027700 Sobic001G488400--Sobic006G044200 Sobic008G187400 Sobic008G187400 Sobic001G488400--Sobic008G187400 Sobic001G488400--Sobic001G438500 Sobic001G488400--Sobic003G116100 Sobic001G488400--Sobic007G189400 Sobic001G488400--Sobic002G068400 Sobic001G488400--Sobic008G035400 Sobic006G219100--Sobic007G094200 Sobic006G219100--Sobic004G215000 Sobic006G219100--Sobic001G179400 Sobic004G227900 Sobic004G227900 Sobic006G219100--Sobic004G227900 Sobic008G154700 Sobic008G154700 Sobic006G219100--Sobic008G154700 Sobic006G219100--Sobic003G116100 Sobic006G219100--Sobic010G027700 Sobic006G219100--Sobic002G068400 Sobic006G219100--Sobic004G342000 Sobic002G183800 Sobic002G183800 Sobic009G037300--Sobic002G183800 Sobic009G037300--Sobic010G027700 Sobic008G012600 Sobic008G012600 Sobic009G037300--Sobic008G012600 Sobic009G037300--Sobic002G023700 Sobic005G110900 Sobic005G110900 Sobic009G037300--Sobic005G110900 Sobic009G037300--Sobic003G120600 Sobic009G037300--Sobic007G125400 Sobic009G037300--Sobic009G254500 Sobic001G266100 Sobic001G266100 Sobic009G037300--Sobic001G266100 Sobic002G023700--Sobic010G027700 Sobic002G023700--Sobic009G037300 Sobic002G023700--Sobic008G012600 Sobic002G023700--Sobic004G215000 Sobic002G023700--Sobic001G438500 Sobic002G023700--Sobic002G183800 Sobic002G023700--Sobic001G266100 Sobic008G004200 Sobic008G004200 Sobic002G023700--Sobic008G004200 Sobic002G023700--Sobic009G254500
Octagon: transcription factors


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