Gene annotation
Transcriptome id Sobic.002G186800.1
Synonym Sb02g023470
Functional annotation strictosidine synthase, putative, expressed
UniProt C5XBD3
Pfam PF08450
Panther DB PTHR10426 PTHR10426:SF31
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57030 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os09g20810.1 : strictosidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a046758
Brachypodium KQJ90062 , KQJ90063
Barley HORVU5Hr1G058940.2 , HORVU5Hr1G058940.1 , HORVU5Hr1G058910.1 , HORVU5Hr1G058910.2 , HORVU5Hr1G058910.3
Wheat TraesCS5B02G195400 , TraesCS5B02G195300 , TraesCS5A02G188200 , TraesCS5D02G202700 , TraesCS5D02G202800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G094200 expressed protein -
2 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
3 Sobic.004G248100 endoglucanase, putative, expressed -
4 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
5 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
6 Sobic.002G068400 - -
7 Sobic.002G416400 basic helix-loop-helix domain containing protein, expressed -
8 Sobic.004G211700 - -
9 Sobic.009G254500 protein kinase, putative, expressed -
10 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
11 Sobic.002G404300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
13 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
14 Sobic.001G179400 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
15 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
16 Sobic.002G382500 heavy metal-associated domain containing protein, expressed -
17 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.007G115400 receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.008G035400 stress responsive A/B Barrel domain containing protein, expressed -
20 Sobic.004G102200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP


Gene co-expression network
sample Sobic002G186800 Sobic002G186800 Sobic007G094200 Sobic007G094200 Sobic002G186800--Sobic007G094200 Sobic003G178500 Sobic003G178500 Sobic002G186800--Sobic003G178500 Sobic004G248100 Sobic004G248100 Sobic002G186800--Sobic004G248100 Sobic004G342000 Sobic004G342000 Sobic002G186800--Sobic004G342000 Sobic002G032500 Sobic002G032500 Sobic002G186800--Sobic002G032500 Sobic002G068400 Sobic002G068400 Sobic002G186800--Sobic002G068400 Sobic002G416400 Sobic002G416400 Sobic002G186800--Sobic002G416400 Sobic004G211700 Sobic004G211700 Sobic002G186800--Sobic004G211700 Sobic009G254500 Sobic009G254500 Sobic002G186800--Sobic009G254500 Sobic007G094200--Sobic002G032500 Sobic007G094200--Sobic002G416400 Sobic008G154700 Sobic008G154700 Sobic007G094200--Sobic008G154700 Sobic007G094200--Sobic003G178500 Sobic007G094200--Sobic004G342000 Sobic010G027700 Sobic010G027700 Sobic007G094200--Sobic010G027700 Sobic001G438500 Sobic001G438500 Sobic007G094200--Sobic001G438500 Sobic004G227900 Sobic004G227900 Sobic007G094200--Sobic004G227900 Sobic006G219100 Sobic006G219100 Sobic007G094200--Sobic006G219100 Sobic007G076100 Sobic007G076100 Sobic003G178500--Sobic007G076100 Sobic003G178500--Sobic002G416400 Sobic005G218000 Sobic005G218000 Sobic003G178500--Sobic005G218000 Sobic010G166300 Sobic010G166300 Sobic003G178500--Sobic010G166300 Sobic004G318800 Sobic004G318800 Sobic003G178500--Sobic004G318800 Sobic001G341700 Sobic001G341700 Sobic003G178500--Sobic001G341700 Sobic009G023900 Sobic009G023900 Sobic003G178500--Sobic009G023900 Sobic003G027100 Sobic003G027100 Sobic003G178500--Sobic003G027100 Sobic003G178500--Sobic004G211700 Sobic004G248100--Sobic002G032500 Sobic003G113500 Sobic003G113500 Sobic004G248100--Sobic003G113500 Sobic010G020600 Sobic010G020600 Sobic004G248100--Sobic010G020600 Sobic004G357000 Sobic004G357000 Sobic004G248100--Sobic004G357000 Sobic003G309400 Sobic003G309400 Sobic004G248100--Sobic003G309400 Sobic003G338200 Sobic003G338200 Sobic004G248100--Sobic003G338200 Sobic003G339600 Sobic003G339600 Sobic004G248100--Sobic003G339600 Sobic006G044200 Sobic006G044200 Sobic004G248100--Sobic006G044200 Sobic004G248100--Sobic007G094200 Sobic004G342000--Sobic005G218000 Sobic004G342000--Sobic001G341700 Sobic004G342000--Sobic004G211700 Sobic002G029700 Sobic002G029700 Sobic004G342000--Sobic002G029700 Sobic004G342000--Sobic007G076100 Sobic008G012600 Sobic008G012600 Sobic004G342000--Sobic008G012600 Sobic004G342000--Sobic002G416400 Sobic006G151800 Sobic006G151800 Sobic004G342000--Sobic006G151800 Sobic006G089700 Sobic006G089700 Sobic004G342000--Sobic006G089700 Sobic002G032500--Sobic003G309400 Sobic002G032500--Sobic007G094200 Sobic003G300400 Sobic003G300400 Sobic002G032500--Sobic003G300400 Sobic007G211200 Sobic007G211200 Sobic002G032500--Sobic007G211200 Sobic002G032500--Sobic004G211700 Sobic003G089300 Sobic003G089300 Sobic002G032500--Sobic003G089300 Sobic002G032500--Sobic004G248100 Sobic005G091000 Sobic005G091000 Sobic002G032500--Sobic005G091000 Sobic002G032500--Sobic003G338200 Sobic002G068400--Sobic010G027700 Sobic008G035400 Sobic008G035400 Sobic002G068400--Sobic008G035400 Sobic001G179400 Sobic001G179400 Sobic002G068400--Sobic001G179400 Sobic004G215000 Sobic004G215000 Sobic002G068400--Sobic004G215000 Sobic002G068400--Sobic004G342000 Sobic010G077700 Sobic010G077700 Sobic002G068400--Sobic010G077700 Sobic002G382500 Sobic002G382500 Sobic002G068400--Sobic002G382500 Sobic002G068400--Sobic007G094200 Sobic004G045500 Sobic004G045500 Sobic002G068400--Sobic004G045500 Sobic002G416400--Sobic003G178500 Sobic002G416400--Sobic007G076100 Sobic002G416400--Sobic004G318800 Sobic002G416400--Sobic005G218000 Sobic002G416400--Sobic007G094200 Sobic002G416400--Sobic001G341700 Sobic002G416400--Sobic004G342000 Sobic006G079500 Sobic006G079500 Sobic002G416400--Sobic006G079500 Sobic006G092300 Sobic006G092300 Sobic002G416400--Sobic006G092300 Sobic004G211700--Sobic004G342000 Sobic004G211700--Sobic009G023900 Sobic004G211700--Sobic003G178500 Sobic001G286700 Sobic001G286700 Sobic004G211700--Sobic001G286700 Sobic004G211700--Sobic003G027100 Sobic004G211700--Sobic005G218000 Sobic004G211700--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic004G211700--Sobic002G312200 Sobic004G211700--Sobic010G166300 Sobic002G011000 Sobic002G011000 Sobic009G254500--Sobic002G011000 Sobic009G254500--Sobic008G012600 Sobic009G141300 Sobic009G141300 Sobic009G254500--Sobic009G141300 Sobic001G119200 Sobic001G119200 Sobic009G254500--Sobic001G119200 Sobic009G254500--Sobic001G438500 Sobic006G160800 Sobic006G160800 Sobic009G254500--Sobic006G160800 Sobic009G254500--Sobic010G077700 Sobic004G062100 Sobic004G062100 Sobic009G254500--Sobic004G062100 Sobic009G254500--Sobic003G300400
Octagon: transcription factors


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