Gene annotation
Transcriptome id Sobic.004G274600.1,Sobic.004G274600.2
Synonym P-glycoprotein, Sb04g031170, SbPGP14, PGP2
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments" (PubMedID : 20528920)
multidrug resistance protein, putative, expressed
UniProt C5Y0R2 , C5Y0R0
Pfam PF00005 PF00664
Panther DB PTHR24221 PTHR24221:SF138 PTHR24221
NCBI CDD -
KEGG Orthology K05658; ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT4G25960 : P-glycoprotein 2
RAP-DB (Rice) LOC_Os02g46680.1 : multidrug resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a057176 , Zm00025a013659 , Zm00025a056314 , Zm00025a032376 , Zm00025a009581
Brachypodium KQK00850 , KQK00851 , PNT61308 , KQK07666 , KQJ94695
Barley HORVU2Hr1G115180.1 , HORVU2Hr1G115180.2 , HORVU2Hr1G115180.3 , HORVU2Hr1G115180.4 , HORVU2Hr1G115180.5 , HORVU2Hr1G115180.6 , HORVU2Hr1G115180.7 , HORVU6Hr1G067170.4 , HORVU6Hr1G067170.3 , HORVU6Hr1G067170.2 , HORVU6Hr1G067170.1 , HORVU1Hr1G017460.1 , HORVU1Hr1G017460.3 , HORVU1Hr1G017460.2 , HORVU2Hr1G083120.4 , HORVU2Hr1G083120.3 , HORVU2Hr1G083120.1 , HORVU6Hr1G067200.2 , HORVU6Hr1G067200.9 , HORVU6Hr1G067200.8 , HORVU6Hr1G067200.3 , HORVU6Hr1G067200.5 , HORVU6Hr1G067200.4 , HORVU6Hr1G067200.7 , HORVU6Hr1G067200.6 , HORVU6Hr1G067200.1
Wheat TraesCS2B02G358200 , TraesCS6B02G291900 , TraesCS2D02G523100 , TraesCS2D02G523100 , TraesCS2A02G323900 , TraesCS2A02G521400 , TraesCS2A02G521400 , TraesCS2A02G521400 , TraesCS2B02G550700 , TraesCS2B02G550700 , TraesCS6A02G264900 , TraesCS6A02G264900 , TraesCS6A02G264900 , TraesCS6A02G264900 , TraesCS2B02G341800 , TraesCS2B02G341800 , TraesCS1A02G081300 , TraesCS1B02G099000 , TraesCS1D02G082900 , TraesCS1D02G082900 , TraesCS1D02G082900 , TraesCS6D02G250000 , TraesCS2D02G339000 , TraesCS2A02G344300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
2 Sobic.004G211700 - -
3 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
4 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
5 Sobic.001G207600 white-brown complex homolog protein 11, putative, expressed -
6 Sobic.008G097700 transmembrane amino acid transporter protein, putative, expressed -
7 Sobic.008G008100 kelch repeat-containing protein, putative, expressed -
8 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
9 Sobic.003G298700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.004G102200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
11 Sobic.001G199400 monocopper oxidase, putative, expressed -
12 Sobic.004G283800 dehydration response related protein, putative, expressed -
13 Sobic.003G356600 ATROPGEF7/ROPGEF7, putative, expressed -
14 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
15 Sobic.002G363300 - -
16 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
17 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
19 Sobic.009G023900 homeobox domain containing protein, expressed -
20 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase


Gene co-expression network
sample Sobic004G274600 Sobic004G274600 Sobic007G165800 Sobic007G165800 Sobic004G274600--Sobic007G165800 Sobic004G211700 Sobic004G211700 Sobic004G274600--Sobic004G211700 Sobic001G434100 Sobic001G434100 Sobic004G274600--Sobic001G434100 Sobic001G286700 Sobic001G286700 Sobic004G274600--Sobic001G286700 Sobic001G207600 Sobic001G207600 Sobic004G274600--Sobic001G207600 Sobic008G097700 Sobic008G097700 Sobic004G274600--Sobic008G097700 Sobic008G008100 Sobic008G008100 Sobic004G274600--Sobic008G008100 Sobic003G027100 Sobic003G027100 Sobic004G274600--Sobic003G027100 Sobic003G298700 Sobic003G298700 Sobic004G274600--Sobic003G298700 Sobic007G165800--Sobic004G274600 Sobic007G165800--Sobic001G434100 Sobic007G180200 Sobic007G180200 Sobic007G165800--Sobic007G180200 Sobic007G165800--Sobic001G286700 Sobic007G165800--Sobic003G027100 Sobic010G235300 Sobic010G235300 Sobic007G165800--Sobic010G235300 Sobic001G199400 Sobic001G199400 Sobic007G165800--Sobic001G199400 Sobic007G170100 Sobic007G170100 Sobic007G165800--Sobic007G170100 Sobic003G338700 Sobic003G338700 Sobic007G165800--Sobic003G338700 Sobic004G342000 Sobic004G342000 Sobic004G211700--Sobic004G342000 Sobic009G023900 Sobic009G023900 Sobic004G211700--Sobic009G023900 Sobic003G178500 Sobic003G178500 Sobic004G211700--Sobic003G178500 Sobic004G211700--Sobic001G286700 Sobic004G211700--Sobic003G027100 Sobic005G218000 Sobic005G218000 Sobic004G211700--Sobic005G218000 Sobic001G341700 Sobic001G341700 Sobic004G211700--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic004G211700--Sobic002G312200 Sobic010G166300 Sobic010G166300 Sobic004G211700--Sobic010G166300 Sobic001G434100--Sobic007G165800 Sobic001G434100--Sobic004G274600 Sobic001G434100--Sobic001G286700 Sobic001G434100--Sobic003G027100 Sobic001G434100--Sobic001G199400 Sobic001G470200 Sobic001G470200 Sobic001G434100--Sobic001G470200 Sobic007G032100 Sobic007G032100 Sobic001G434100--Sobic007G032100 Sobic001G434100--Sobic010G235300 Sobic004G357000 Sobic004G357000 Sobic001G434100--Sobic004G357000 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic002G363300 Sobic002G363300 Sobic001G286700--Sobic002G363300 Sobic001G286700--Sobic004G211700 Sobic006G273600 Sobic006G273600 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic001G286700--Sobic003G338700 Sobic005G199700 Sobic005G199700 Sobic001G286700--Sobic005G199700 Sobic001G286700--Sobic007G165800 Sobic003G045700 Sobic003G045700 Sobic001G207600--Sobic003G045700 Sobic004G283800 Sobic004G283800 Sobic001G207600--Sobic004G283800 Sobic001G207600--Sobic004G274600 Sobic009G174100 Sobic009G174100 Sobic001G207600--Sobic009G174100 Sobic010G231600 Sobic010G231600 Sobic001G207600--Sobic010G231600 Sobic010G020600 Sobic010G020600 Sobic001G207600--Sobic010G020600 Sobic005G156100 Sobic005G156100 Sobic001G207600--Sobic005G156100 Sobic001G207600--Sobic008G097700 Sobic003G339600 Sobic003G339600 Sobic001G207600--Sobic003G339600 Sobic008G097700--Sobic004G274600 Sobic008G097700--Sobic010G020600 Sobic003G089300 Sobic003G089300 Sobic008G097700--Sobic003G089300 Sobic008G097700--Sobic004G211700 Sobic008G097700--Sobic001G470200 Sobic002G032500 Sobic002G032500 Sobic008G097700--Sobic002G032500 Sobic003G070600 Sobic003G070600 Sobic008G097700--Sobic003G070600 Sobic007G160300 Sobic007G160300 Sobic008G097700--Sobic007G160300 Sobic003G300400 Sobic003G300400 Sobic008G097700--Sobic003G300400 Sobic008G008100--Sobic004G274600 Sobic008G008100--Sobic002G363300 Sobic008G008100--Sobic004G211700 Sobic003G010700 Sobic003G010700 Sobic008G008100--Sobic003G010700 Sobic008G008100--Sobic001G286700 Sobic008G008100--Sobic009G023900 Sobic003G356600 Sobic003G356600 Sobic008G008100--Sobic003G356600 Sobic005G009600 Sobic005G009600 Sobic008G008100--Sobic005G009600 Sobic008G008100--Sobic002G312200 Sobic003G027100--Sobic003G178500 Sobic003G027100--Sobic002G363300 Sobic003G027100--Sobic001G286700 Sobic003G027100--Sobic010G235300 Sobic003G027100--Sobic004G211700 Sobic003G027100--Sobic010G166300 Sobic003G027100--Sobic007G165800 Sobic005G034500 Sobic005G034500 Sobic003G027100--Sobic005G034500 Sobic002G312300 Sobic002G312300 Sobic003G027100--Sobic002G312300 Sobic004G102200 Sobic004G102200 Sobic003G298700--Sobic004G102200 Sobic003G298700--Sobic004G274600 Sobic003G298700--Sobic004G211700 Sobic010G014700 Sobic010G014700 Sobic003G298700--Sobic010G014700 Sobic003G298700--Sobic002G363300 Sobic003G298700--Sobic002G312300 Sobic006G270500 Sobic006G270500 Sobic003G298700--Sobic006G270500 Sobic003G298700--Sobic003G027100 Sobic003G298700--Sobic008G008100
Octagon: transcription factors


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