Gene annotation
Transcriptome id Sobic.003G298700.1
Synonym Sb03g034860
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XK64
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g55000.1 : expressed protein
MaizeGDB (Corn) Zm00025a027540
Brachypodium KQK09781
Barley HORVU3Hr1G072380.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G298700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G102200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
2 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
3 Sobic.004G211700 - -
4 Sobic.010G014700 expressed protein -
5 Sobic.002G363300 - -
6 Sobic.002G312300 SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
7 Sobic.006G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
9 Sobic.008G008100 kelch repeat-containing protein, putative, expressed -
10 Sobic.004G283800 dehydration response related protein, putative, expressed -
11 Sobic.001G199400 monocopper oxidase, putative, expressed -
12 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
13 Sobic.004G045500 phytosulfokine receptor precursor, putative, expressed -
14 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
15 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
16 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
17 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
18 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
19 Sobic.003G356600 ATROPGEF7/ROPGEF7, putative, expressed -
20 Sobic.004G324500 expressed protein -


Gene co-expression network
sample Sobic003G298700 Sobic003G298700 Sobic004G102200 Sobic004G102200 Sobic003G298700--Sobic004G102200 Sobic004G274600 Sobic004G274600 Sobic003G298700--Sobic004G274600 Sobic004G211700 Sobic004G211700 Sobic003G298700--Sobic004G211700 Sobic010G014700 Sobic010G014700 Sobic003G298700--Sobic010G014700 Sobic002G363300 Sobic002G363300 Sobic003G298700--Sobic002G363300 Sobic002G312300 Sobic002G312300 Sobic003G298700--Sobic002G312300 Sobic006G270500 Sobic006G270500 Sobic003G298700--Sobic006G270500 Sobic003G027100 Sobic003G027100 Sobic003G298700--Sobic003G027100 Sobic008G008100 Sobic008G008100 Sobic003G298700--Sobic008G008100 Sobic004G102200--Sobic003G298700 Sobic004G102200--Sobic004G274600 Sobic004G102200--Sobic006G270500 Sobic007G165800 Sobic007G165800 Sobic004G102200--Sobic007G165800 Sobic001G199400 Sobic001G199400 Sobic004G102200--Sobic001G199400 Sobic004G102200--Sobic008G008100 Sobic002G186800 Sobic002G186800 Sobic004G102200--Sobic002G186800 Sobic009G175100 Sobic009G175100 Sobic004G102200--Sobic009G175100 Sobic003G070600 Sobic003G070600 Sobic004G102200--Sobic003G070600 Sobic004G274600--Sobic007G165800 Sobic004G274600--Sobic004G211700 Sobic001G434100 Sobic001G434100 Sobic004G274600--Sobic001G434100 Sobic001G286700 Sobic001G286700 Sobic004G274600--Sobic001G286700 Sobic001G207600 Sobic001G207600 Sobic004G274600--Sobic001G207600 Sobic008G097700 Sobic008G097700 Sobic004G274600--Sobic008G097700 Sobic004G274600--Sobic008G008100 Sobic004G274600--Sobic003G027100 Sobic004G274600--Sobic003G298700 Sobic004G342000 Sobic004G342000 Sobic004G211700--Sobic004G342000 Sobic009G023900 Sobic009G023900 Sobic004G211700--Sobic009G023900 Sobic003G178500 Sobic003G178500 Sobic004G211700--Sobic003G178500 Sobic004G211700--Sobic001G286700 Sobic004G211700--Sobic003G027100 Sobic005G218000 Sobic005G218000 Sobic004G211700--Sobic005G218000 Sobic001G341700 Sobic001G341700 Sobic004G211700--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic004G211700--Sobic002G312200 Sobic010G166300 Sobic010G166300 Sobic004G211700--Sobic010G166300 Sobic003G338700 Sobic003G338700 Sobic010G014700--Sobic003G338700 Sobic009G146700 Sobic009G146700 Sobic010G014700--Sobic009G146700 Sobic010G014700--Sobic001G199400 Sobic005G199700 Sobic005G199700 Sobic010G014700--Sobic005G199700 Sobic010G014700--Sobic002G363300 Sobic010G014500 Sobic010G014500 Sobic010G014700--Sobic010G014500 Sobic007G180200 Sobic007G180200 Sobic010G014700--Sobic007G180200 Sobic010G014700--Sobic003G027100 Sobic004G215400 Sobic004G215400 Sobic010G014700--Sobic004G215400 Sobic006G273600 Sobic006G273600 Sobic002G363300--Sobic006G273600 Sobic002G363300--Sobic005G199700 Sobic002G363300--Sobic009G146700 Sobic003G010700 Sobic003G010700 Sobic002G363300--Sobic003G010700 Sobic002G363300--Sobic003G027100 Sobic002G363300--Sobic003G338700 Sobic002G363300--Sobic001G286700 Sobic005G009600 Sobic005G009600 Sobic002G363300--Sobic005G009600 Sobic007G170100 Sobic007G170100 Sobic002G363300--Sobic007G170100 Sobic002G312300--Sobic002G312200 Sobic002G312300--Sobic010G166300 Sobic007G076100 Sobic007G076100 Sobic002G312300--Sobic007G076100 Sobic002G312300--Sobic003G178500 Sobic002G312300--Sobic005G218000 Sobic002G312300--Sobic003G027100 Sobic002G312300--Sobic009G023900 Sobic002G312300--Sobic001G341700 Sobic004G318800 Sobic004G318800 Sobic002G312300--Sobic004G318800 Sobic006G270500--Sobic004G102200 Sobic006G270500--Sobic003G298700 Sobic007G087800 Sobic007G087800 Sobic006G270500--Sobic007G087800 Sobic006G270500--Sobic009G175100 Sobic007G116800 Sobic007G116800 Sobic006G270500--Sobic007G116800 Sobic006G193100 Sobic006G193100 Sobic006G270500--Sobic006G193100 Sobic001G286400 Sobic001G286400 Sobic006G270500--Sobic001G286400 Sobic006G014400 Sobic006G014400 Sobic006G270500--Sobic006G014400 Sobic001G522300 Sobic001G522300 Sobic006G270500--Sobic001G522300 Sobic003G027100--Sobic003G178500 Sobic003G027100--Sobic002G363300 Sobic003G027100--Sobic001G286700 Sobic010G235300 Sobic010G235300 Sobic003G027100--Sobic010G235300 Sobic003G027100--Sobic004G211700 Sobic003G027100--Sobic010G166300 Sobic003G027100--Sobic007G165800 Sobic005G034500 Sobic005G034500 Sobic003G027100--Sobic005G034500 Sobic003G027100--Sobic002G312300 Sobic008G008100--Sobic004G274600 Sobic008G008100--Sobic002G363300 Sobic008G008100--Sobic004G211700 Sobic008G008100--Sobic003G010700 Sobic008G008100--Sobic001G286700 Sobic008G008100--Sobic009G023900 Sobic003G356600 Sobic003G356600 Sobic008G008100--Sobic003G356600 Sobic008G008100--Sobic005G009600 Sobic008G008100--Sobic002G312200
Octagon: transcription factors


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