Gene annotation
Transcriptome id Sobic.004G324500.5,Sobic.004G324500.2,Sobic.004G324500.6,Sobic.004G324500.4,Sobic.004G324500.1,Sobic.004G324500.3
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RQ28 , A0A1Z5RQ97 , A0A1Z5RQX7 , A0A194YSU5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g01360.2,LOC_Os03g01360.3,LOC_Os03g01360.4,LOC_Os03g01360.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
2 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
3 Sobic.003G382400 MLO domain containing protein, putative, expressed K08472: mlo protein
4 Sobic.009G023900 homeobox domain containing protein, expressed -
5 Sobic.006G005900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
6 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
7 Sobic.007G076100 transferase family protein, putative, expressed -
8 Sobic.008G013400 nodulin, putative, expressed -
9 Sobic.010G166300 expressed protein -
10 Sobic.004G211700 - -
11 Sobic.002G312300 SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
12 Sobic.002G363300 - -
13 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
14 Sobic.010G048800 expressed protein -
15 Sobic.005G118700 expressed protein -
16 Sobic.005G110900 expressed protein -
17 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.006G005800 expressed protein -
19 Sobic.004G318800 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
20 Sobic.006G117900 brevis radix, putative, expressed -


Gene co-expression network
sample Sobic004G324500 Sobic004G324500 Sobic002G312200 Sobic002G312200 Sobic004G324500--Sobic002G312200 Sobic005G218000 Sobic005G218000 Sobic004G324500--Sobic005G218000 Sobic003G382400 Sobic003G382400 Sobic004G324500--Sobic003G382400 Sobic009G023900 Sobic009G023900 Sobic004G324500--Sobic009G023900 Sobic006G005900 Sobic006G005900 Sobic004G324500--Sobic006G005900 Sobic001G341700 Sobic001G341700 Sobic004G324500--Sobic001G341700 Sobic007G076100 Sobic007G076100 Sobic004G324500--Sobic007G076100 Sobic008G013400 Sobic008G013400 Sobic004G324500--Sobic008G013400 Sobic010G166300 Sobic010G166300 Sobic004G324500--Sobic010G166300 Sobic002G312200--Sobic005G218000 Sobic002G312200--Sobic007G076100 Sobic002G312200--Sobic001G341700 Sobic004G318800 Sobic004G318800 Sobic002G312200--Sobic004G318800 Sobic006G089700 Sobic006G089700 Sobic002G312200--Sobic006G089700 Sobic005G118700 Sobic005G118700 Sobic002G312200--Sobic005G118700 Sobic006G092300 Sobic006G092300 Sobic002G312200--Sobic006G092300 Sobic002G312300 Sobic002G312300 Sobic002G312200--Sobic002G312300 Sobic003G178500 Sobic003G178500 Sobic002G312200--Sobic003G178500 Sobic005G218000--Sobic007G076100 Sobic005G218000--Sobic001G341700 Sobic005G218000--Sobic002G312200 Sobic005G218000--Sobic006G092300 Sobic005G218000--Sobic004G318800 Sobic006G079500 Sobic006G079500 Sobic005G218000--Sobic006G079500 Sobic001G491400 Sobic001G491400 Sobic005G218000--Sobic001G491400 Sobic001G266100 Sobic001G266100 Sobic005G218000--Sobic001G266100 Sobic010G049600 Sobic010G049600 Sobic005G218000--Sobic010G049600 Sobic003G382400--Sobic001G266100 Sobic005G110900 Sobic005G110900 Sobic003G382400--Sobic005G110900 Sobic003G382400--Sobic005G218000 Sobic004G118100 Sobic004G118100 Sobic003G382400--Sobic004G118100 Sobic003G382400--Sobic010G049600 Sobic003G382400--Sobic001G491400 Sobic003G382400--Sobic008G013400 Sobic008G012600 Sobic008G012600 Sobic003G382400--Sobic008G012600 Sobic006G160800 Sobic006G160800 Sobic003G382400--Sobic006G160800 Sobic009G023900--Sobic010G166300 Sobic009G023900--Sobic003G178500 Sobic005G009600 Sobic005G009600 Sobic009G023900--Sobic005G009600 Sobic009G023900--Sobic005G218000 Sobic004G211700 Sobic004G211700 Sobic009G023900--Sobic004G211700 Sobic009G023900--Sobic007G076100 Sobic009G023900--Sobic001G341700 Sobic009G023900--Sobic002G312200 Sobic009G023900--Sobic006G005900 Sobic006G005800 Sobic006G005800 Sobic006G005900--Sobic006G005800 Sobic006G005900--Sobic009G023900 Sobic003G090650 Sobic003G090650 Sobic006G005900--Sobic003G090650 Sobic006G005900--Sobic005G110900 Sobic002G353100 Sobic002G353100 Sobic006G005900--Sobic002G353100 Sobic006G005900--Sobic004G324500 Sobic001G447800 Sobic001G447800 Sobic006G005900--Sobic001G447800 Sobic006G005900--Sobic003G382400 Sobic006G005900--Sobic005G218000 Sobic001G341700--Sobic007G076100 Sobic001G341700--Sobic004G318800 Sobic001G341700--Sobic005G218000 Sobic001G341700--Sobic006G079500 Sobic001G341700--Sobic006G092300 Sobic001G341700--Sobic006G089700 Sobic001G341700--Sobic002G312200 Sobic002G029700 Sobic002G029700 Sobic001G341700--Sobic002G029700 Sobic001G341700--Sobic003G178500 Sobic007G076100--Sobic004G318800 Sobic007G076100--Sobic005G218000 Sobic007G076100--Sobic001G341700 Sobic007G076100--Sobic006G079500 Sobic007G076100--Sobic003G178500 Sobic007G076100--Sobic006G092300 Sobic007G076100--Sobic002G312200 Sobic007G076100--Sobic006G089700 Sobic002G416400 Sobic002G416400 Sobic007G076100--Sobic002G416400 Sobic008G013400--Sobic001G266100 Sobic008G013400--Sobic004G118100 Sobic008G013400--Sobic005G118700 Sobic008G013400--Sobic010G049600 Sobic008G013400--Sobic001G491400 Sobic008G013400--Sobic003G382400 Sobic003G271700 Sobic003G271700 Sobic008G013400--Sobic003G271700 Sobic003G011700 Sobic003G011700 Sobic008G013400--Sobic003G011700 Sobic008G013400--Sobic002G312200 Sobic010G166300--Sobic009G023900 Sobic010G166300--Sobic005G009600 Sobic010G166300--Sobic003G178500 Sobic010G166300--Sobic007G076100 Sobic010G166300--Sobic001G341700 Sobic010G166300--Sobic002G312200 Sobic010G166300--Sobic002G312300 Sobic003G027100 Sobic003G027100 Sobic010G166300--Sobic003G027100 Sobic010G166300--Sobic005G218000
Octagon: transcription factors


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