Gene annotation
Transcriptome id Sobic.006G117900.1,Sobic.006G117900.2
Synonym Sb06g019900, ATBRXL2, BRX-LIKE2
Functional annotation brevis radix, putative, expressed
UniProt A0A1Z5REB1 , C5YAE1
Pfam PF08381
Panther DB PTHR22870 PTHR22870:SF190
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14000 : DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
RAP-DB (Rice) LOC_Os04g39940.1 : brevis radix, putative, expressed
MaizeGDB (Corn) Zm00025a011021
Brachypodium PNT61294
Barley -
Wheat TraesCS2D02G333900 , TraesCS2A02G328800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
2 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
3 Sobic.002G179200 DUF623 domain containing protein, expressed -
4 Sobic.001G366000 LTPL1 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.007G076100 transferase family protein, putative, expressed -
6 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
7 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
8 Sobic.004G318800 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
9 Sobic.006G005800 expressed protein -
10 Sobic.008G004200 MYB family transcription factor, putative, expressed -
11 Sobic.002G165500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.006G079500 AMP-binding domain containing protein, expressed -
13 Sobic.001G152400 expressed protein -
14 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
15 Sobic.003G011700 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
16 Sobic.001G491400 cytochrome P450, putative, expressed -
17 Sobic.005G090000 expressed protein -
18 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -


Gene co-expression network
sample Sobic006G117900 Sobic006G117900 Sobic006G092300 Sobic006G092300 Sobic006G117900--Sobic006G092300 Sobic005G218000 Sobic005G218000 Sobic006G117900--Sobic005G218000 Sobic002G179200 Sobic002G179200 Sobic006G117900--Sobic002G179200 Sobic001G366000 Sobic001G366000 Sobic006G117900--Sobic001G366000 Sobic007G076100 Sobic007G076100 Sobic006G117900--Sobic007G076100 Sobic001G341700 Sobic001G341700 Sobic006G117900--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic006G117900--Sobic002G312200 Sobic004G318800 Sobic004G318800 Sobic006G117900--Sobic004G318800 Sobic006G005800 Sobic006G005800 Sobic006G117900--Sobic006G005800 Sobic006G079500 Sobic006G079500 Sobic006G092300--Sobic006G079500 Sobic001G102600 Sobic001G102600 Sobic006G092300--Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic006G092300--Sobic010G189366 Sobic010G215700 Sobic010G215700 Sobic006G092300--Sobic010G215700 Sobic007G206000 Sobic007G206000 Sobic006G092300--Sobic007G206000 Sobic004G349150 Sobic004G349150 Sobic006G092300--Sobic004G349150 Sobic005G226500 Sobic005G226500 Sobic006G092300--Sobic005G226500 Sobic001G491400 Sobic001G491400 Sobic006G092300--Sobic001G491400 Sobic005G200700 Sobic005G200700 Sobic006G092300--Sobic005G200700 Sobic005G218000--Sobic007G076100 Sobic005G218000--Sobic001G341700 Sobic005G218000--Sobic002G312200 Sobic005G218000--Sobic006G092300 Sobic005G218000--Sobic004G318800 Sobic005G218000--Sobic006G079500 Sobic005G218000--Sobic001G491400 Sobic001G266100 Sobic001G266100 Sobic005G218000--Sobic001G266100 Sobic010G049600 Sobic010G049600 Sobic005G218000--Sobic010G049600 Sobic002G179200--Sobic001G366000 Sobic003G011700 Sobic003G011700 Sobic002G179200--Sobic003G011700 Sobic002G179200--Sobic001G102600 Sobic008G004200 Sobic008G004200 Sobic002G179200--Sobic008G004200 Sobic001G511600 Sobic001G511600 Sobic002G179200--Sobic001G511600 Sobic002G179200--Sobic006G092300 Sobic002G179200--Sobic010G189366 Sobic003G004900 Sobic003G004900 Sobic002G179200--Sobic003G004900 Sobic001G472400 Sobic001G472400 Sobic002G179200--Sobic001G472400 Sobic002G165500 Sobic002G165500 Sobic001G366000--Sobic002G165500 Sobic007G000600 Sobic007G000600 Sobic001G366000--Sobic007G000600 Sobic001G366000--Sobic005G200700 Sobic008G032400 Sobic008G032400 Sobic001G366000--Sobic008G032400 Sobic009G046000 Sobic009G046000 Sobic001G366000--Sobic009G046000 Sobic002G399600 Sobic002G399600 Sobic001G366000--Sobic002G399600 Sobic010G187400 Sobic010G187400 Sobic001G366000--Sobic010G187400 Sobic001G366000--Sobic004G349150 Sobic002G270400 Sobic002G270400 Sobic001G366000--Sobic002G270400 Sobic007G076100--Sobic004G318800 Sobic007G076100--Sobic005G218000 Sobic007G076100--Sobic001G341700 Sobic007G076100--Sobic006G079500 Sobic003G178500 Sobic003G178500 Sobic007G076100--Sobic003G178500 Sobic007G076100--Sobic006G092300 Sobic007G076100--Sobic002G312200 Sobic006G089700 Sobic006G089700 Sobic007G076100--Sobic006G089700 Sobic002G416400 Sobic002G416400 Sobic007G076100--Sobic002G416400 Sobic001G341700--Sobic007G076100 Sobic001G341700--Sobic004G318800 Sobic001G341700--Sobic005G218000 Sobic001G341700--Sobic006G079500 Sobic001G341700--Sobic006G092300 Sobic001G341700--Sobic006G089700 Sobic001G341700--Sobic002G312200 Sobic002G029700 Sobic002G029700 Sobic001G341700--Sobic002G029700 Sobic001G341700--Sobic003G178500 Sobic002G312200--Sobic005G218000 Sobic002G312200--Sobic007G076100 Sobic002G312200--Sobic001G341700 Sobic002G312200--Sobic004G318800 Sobic002G312200--Sobic006G089700 Sobic005G118700 Sobic005G118700 Sobic002G312200--Sobic005G118700 Sobic002G312200--Sobic006G092300 Sobic002G312300 Sobic002G312300 Sobic002G312200--Sobic002G312300 Sobic002G312200--Sobic003G178500 Sobic004G318800--Sobic007G076100 Sobic004G318800--Sobic006G079500 Sobic004G318800--Sobic001G341700 Sobic004G318800--Sobic006G092300 Sobic004G318800--Sobic005G218000 Sobic004G318800--Sobic006G089700 Sobic004G318800--Sobic007G206000 Sobic007G048500 Sobic007G048500 Sobic004G318800--Sobic007G048500 Sobic004G318800--Sobic005G226500 Sobic002G353100 Sobic002G353100 Sobic006G005800--Sobic002G353100 Sobic003G090650 Sobic003G090650 Sobic006G005800--Sobic003G090650 Sobic008G154900 Sobic008G154900 Sobic006G005800--Sobic008G154900 Sobic005G110900 Sobic005G110900 Sobic006G005800--Sobic005G110900 Sobic006G005900 Sobic006G005900 Sobic006G005800--Sobic006G005900 Sobic006G005800--Sobic001G266100 Sobic003G382400 Sobic003G382400 Sobic006G005800--Sobic003G382400 Sobic006G005800--Sobic005G218000 Sobic006G005800--Sobic003G011700
Octagon: transcription factors


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