Gene annotation
Transcriptome id Sobic.006G005900.1
Synonym SCPL51, Sb06g000680
Functional annotation OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5YBM1
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF65
NCBI CDD KOG1283; Serine carboxypeptidases
KEGG Orthology K09646; serine carboxypeptidase 1
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT2G27920 : serine carboxypeptidase-like 51
RAP-DB (Rice) LOC_Os03g27590.1 : OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G005800 expressed protein -
2 Sobic.009G023900 homeobox domain containing protein, expressed -
3 Sobic.003G090650 - -
4 Sobic.005G110900 expressed protein -
5 Sobic.002G353100 expressed protein -
6 Sobic.004G324500 expressed protein -
7 Sobic.001G447800 OsFBO13 - F-box and other domain containing protein, expressed -
8 Sobic.003G382400 MLO domain containing protein, putative, expressed K08472: mlo protein
9 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
10 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
11 Sobic.010G166300 expressed protein -
12 Sobic.002G248300 polygalacturonase inhibitor 1 precursor, putative, expressed -
13 Sobic.009G174100 receptor-like protein kinase 2 precursor, putative, expressed -
14 Sobic.006G042500 U-box domain-containing protein, putative, expressed -
15 Sobic.005G006500 - -
16 Sobic.004G309700 OsMan03 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
17 Sobic.002G312300 SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
18 Sobic.001G266100 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
19 Sobic.004G211700 - -
20 Sobic.005G009600 pectinesterase, putative, expressed K01051: pectinesterase


Gene co-expression network
sample Sobic006G005900 Sobic006G005900 Sobic006G005800 Sobic006G005800 Sobic006G005900--Sobic006G005800 Sobic009G023900 Sobic009G023900 Sobic006G005900--Sobic009G023900 Sobic003G090650 Sobic003G090650 Sobic006G005900--Sobic003G090650 Sobic005G110900 Sobic005G110900 Sobic006G005900--Sobic005G110900 Sobic002G353100 Sobic002G353100 Sobic006G005900--Sobic002G353100 Sobic004G324500 Sobic004G324500 Sobic006G005900--Sobic004G324500 Sobic001G447800 Sobic001G447800 Sobic006G005900--Sobic001G447800 Sobic003G382400 Sobic003G382400 Sobic006G005900--Sobic003G382400 Sobic005G218000 Sobic005G218000 Sobic006G005900--Sobic005G218000 Sobic006G005800--Sobic002G353100 Sobic006G005800--Sobic003G090650 Sobic008G154900 Sobic008G154900 Sobic006G005800--Sobic008G154900 Sobic006G005800--Sobic005G110900 Sobic006G005800--Sobic006G005900 Sobic001G266100 Sobic001G266100 Sobic006G005800--Sobic001G266100 Sobic006G005800--Sobic003G382400 Sobic006G005800--Sobic005G218000 Sobic003G011700 Sobic003G011700 Sobic006G005800--Sobic003G011700 Sobic010G166300 Sobic010G166300 Sobic009G023900--Sobic010G166300 Sobic003G178500 Sobic003G178500 Sobic009G023900--Sobic003G178500 Sobic005G009600 Sobic005G009600 Sobic009G023900--Sobic005G009600 Sobic009G023900--Sobic005G218000 Sobic004G211700 Sobic004G211700 Sobic009G023900--Sobic004G211700 Sobic007G076100 Sobic007G076100 Sobic009G023900--Sobic007G076100 Sobic001G341700 Sobic001G341700 Sobic009G023900--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic009G023900--Sobic002G312200 Sobic009G023900--Sobic006G005900 Sobic003G090650--Sobic002G353100 Sobic003G090650--Sobic006G005800 Sobic002G248300 Sobic002G248300 Sobic003G090650--Sobic002G248300 Sobic003G090650--Sobic005G110900 Sobic006G042500 Sobic006G042500 Sobic003G090650--Sobic006G042500 Sobic004G309700 Sobic004G309700 Sobic003G090650--Sobic004G309700 Sobic003G090650--Sobic006G005900 Sobic005G006500 Sobic005G006500 Sobic003G090650--Sobic005G006500 Sobic002G183800 Sobic002G183800 Sobic003G090650--Sobic002G183800 Sobic008G012600 Sobic008G012600 Sobic005G110900--Sobic008G012600 Sobic005G110900--Sobic001G266100 Sobic005G110900--Sobic003G382400 Sobic005G110900--Sobic002G353100 Sobic005G110900--Sobic005G218000 Sobic006G160800 Sobic006G160800 Sobic005G110900--Sobic006G160800 Sobic005G110900--Sobic006G005800 Sobic005G110900--Sobic003G090650 Sobic005G110900--Sobic002G183800 Sobic002G353100--Sobic003G090650 Sobic002G353100--Sobic006G005800 Sobic002G353100--Sobic005G110900 Sobic002G353100--Sobic001G266100 Sobic002G353100--Sobic003G382400 Sobic002G353100--Sobic002G248300 Sobic002G353100--Sobic006G042500 Sobic002G353100--Sobic005G006500 Sobic002G353100--Sobic006G005900 Sobic004G324500--Sobic002G312200 Sobic004G324500--Sobic005G218000 Sobic004G324500--Sobic003G382400 Sobic004G324500--Sobic009G023900 Sobic004G324500--Sobic006G005900 Sobic004G324500--Sobic001G341700 Sobic004G324500--Sobic007G076100 Sobic008G013400 Sobic008G013400 Sobic004G324500--Sobic008G013400 Sobic004G324500--Sobic010G166300 Sobic001G447800--Sobic006G005900 Sobic001G447800--Sobic003G090650 Sobic001G447800--Sobic006G042500 Sobic001G447800--Sobic003G382400 Sobic009G174100 Sobic009G174100 Sobic001G447800--Sobic009G174100 Sobic001G447800--Sobic005G110900 Sobic006G184000 Sobic006G184000 Sobic001G447800--Sobic006G184000 Sobic001G447800--Sobic002G353100 Sobic001G447800--Sobic002G183800 Sobic003G382400--Sobic001G266100 Sobic003G382400--Sobic005G110900 Sobic003G382400--Sobic005G218000 Sobic004G118100 Sobic004G118100 Sobic003G382400--Sobic004G118100 Sobic010G049600 Sobic010G049600 Sobic003G382400--Sobic010G049600 Sobic001G491400 Sobic001G491400 Sobic003G382400--Sobic001G491400 Sobic003G382400--Sobic008G013400 Sobic003G382400--Sobic008G012600 Sobic003G382400--Sobic006G160800 Sobic005G218000--Sobic007G076100 Sobic005G218000--Sobic001G341700 Sobic005G218000--Sobic002G312200 Sobic006G092300 Sobic006G092300 Sobic005G218000--Sobic006G092300 Sobic004G318800 Sobic004G318800 Sobic005G218000--Sobic004G318800 Sobic006G079500 Sobic006G079500 Sobic005G218000--Sobic006G079500 Sobic005G218000--Sobic001G491400 Sobic005G218000--Sobic001G266100 Sobic005G218000--Sobic010G049600
Octagon: transcription factors


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