Gene annotation
Transcriptome id Sobic.001G447800.1,Sobic.001G447800.5,Sobic.001G447800.2,Sobic.001G447800.4,Sobic.001G447800.3,Sobic.001G447800.6
Synonym Sb01g042070
Functional annotation OsFBO13 - F-box and other domain containing protein, expressed
UniProt C5WRR2
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF151
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10120 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g12940.2 : OsFBO13 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052981 , Zm00025a001405
Brachypodium KQJ99071 , KQJ99072
Barley -
Wheat TraesCS4A02G060200 , TraesCS4A02G060200 , TraesCS4A02G060200 , TraesCS4B02G235700 , TraesCS4B02G235700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G005900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
2 Sobic.003G090650 - -
3 Sobic.006G042500 U-box domain-containing protein, putative, expressed -
4 Sobic.003G382400 MLO domain containing protein, putative, expressed K08472: mlo protein
5 Sobic.009G174100 receptor-like protein kinase 2 precursor, putative, expressed -
6 Sobic.005G110900 expressed protein -
7 Sobic.006G184000 cytochrome P450, putative, expressed -
8 Sobic.002G353100 expressed protein -
9 Sobic.002G183800 L-ascorbate oxidase precursor, putative, expressed -
10 Sobic.006G005800 expressed protein -
11 Sobic.003G367100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
12 Sobic.001G185000 NBS-LRR type disease resistance protein Rps1-k-1, putative, expressed -
13 Sobic.009G052300 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
14 Sobic.004G346500 heavy metal-associated domain containing protein, expressed -
15 Sobic.002G248300 polygalacturonase inhibitor 1 precursor, putative, expressed -
16 Sobic.009G146000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -
17 Sobic.004G309700 OsMan03 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
18 Sobic.005G006500 - -
19 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
20 Sobic.006G281132 - -


Gene co-expression network
sample Sobic001G447800 Sobic001G447800 Sobic006G005900 Sobic006G005900 Sobic001G447800--Sobic006G005900 Sobic003G090650 Sobic003G090650 Sobic001G447800--Sobic003G090650 Sobic006G042500 Sobic006G042500 Sobic001G447800--Sobic006G042500 Sobic003G382400 Sobic003G382400 Sobic001G447800--Sobic003G382400 Sobic009G174100 Sobic009G174100 Sobic001G447800--Sobic009G174100 Sobic005G110900 Sobic005G110900 Sobic001G447800--Sobic005G110900 Sobic006G184000 Sobic006G184000 Sobic001G447800--Sobic006G184000 Sobic002G353100 Sobic002G353100 Sobic001G447800--Sobic002G353100 Sobic002G183800 Sobic002G183800 Sobic001G447800--Sobic002G183800 Sobic006G005800 Sobic006G005800 Sobic006G005900--Sobic006G005800 Sobic009G023900 Sobic009G023900 Sobic006G005900--Sobic009G023900 Sobic006G005900--Sobic003G090650 Sobic006G005900--Sobic005G110900 Sobic006G005900--Sobic002G353100 Sobic004G324500 Sobic004G324500 Sobic006G005900--Sobic004G324500 Sobic006G005900--Sobic001G447800 Sobic006G005900--Sobic003G382400 Sobic005G218000 Sobic005G218000 Sobic006G005900--Sobic005G218000 Sobic003G090650--Sobic002G353100 Sobic003G090650--Sobic006G005800 Sobic002G248300 Sobic002G248300 Sobic003G090650--Sobic002G248300 Sobic003G090650--Sobic005G110900 Sobic003G090650--Sobic006G042500 Sobic004G309700 Sobic004G309700 Sobic003G090650--Sobic004G309700 Sobic003G090650--Sobic006G005900 Sobic005G006500 Sobic005G006500 Sobic003G090650--Sobic005G006500 Sobic003G090650--Sobic002G183800 Sobic006G042500--Sobic003G090650 Sobic006G042500--Sobic002G353100 Sobic006G042500--Sobic003G382400 Sobic006G042500--Sobic002G183800 Sobic006G042500--Sobic005G110900 Sobic006G042500--Sobic006G005800 Sobic001G266100 Sobic001G266100 Sobic006G042500--Sobic001G266100 Sobic006G042500--Sobic001G447800 Sobic006G042500--Sobic002G248300 Sobic003G382400--Sobic001G266100 Sobic003G382400--Sobic005G110900 Sobic003G382400--Sobic005G218000 Sobic004G118100 Sobic004G118100 Sobic003G382400--Sobic004G118100 Sobic010G049600 Sobic010G049600 Sobic003G382400--Sobic010G049600 Sobic001G491400 Sobic001G491400 Sobic003G382400--Sobic001G491400 Sobic008G013400 Sobic008G013400 Sobic003G382400--Sobic008G013400 Sobic008G012600 Sobic008G012600 Sobic003G382400--Sobic008G012600 Sobic006G160800 Sobic006G160800 Sobic003G382400--Sobic006G160800 Sobic001G207600 Sobic001G207600 Sobic009G174100--Sobic001G207600 Sobic009G174100--Sobic001G447800 Sobic009G060800 Sobic009G060800 Sobic009G174100--Sobic009G060800 Sobic009G174100--Sobic006G005900 Sobic004G211700 Sobic004G211700 Sobic009G174100--Sobic004G211700 Sobic002G229700 Sobic002G229700 Sobic009G174100--Sobic002G229700 Sobic009G174100--Sobic005G110900 Sobic004G283800 Sobic004G283800 Sobic009G174100--Sobic004G283800 Sobic004G274600 Sobic004G274600 Sobic009G174100--Sobic004G274600 Sobic005G110900--Sobic008G012600 Sobic005G110900--Sobic001G266100 Sobic005G110900--Sobic003G382400 Sobic005G110900--Sobic002G353100 Sobic005G110900--Sobic005G218000 Sobic005G110900--Sobic006G160800 Sobic005G110900--Sobic006G005800 Sobic005G110900--Sobic003G090650 Sobic005G110900--Sobic002G183800 Sobic010G050500 Sobic010G050500 Sobic006G184000--Sobic010G050500 Sobic001G185000 Sobic001G185000 Sobic006G184000--Sobic001G185000 Sobic006G184000--Sobic001G447800 Sobic006G184000--Sobic003G090650 Sobic004G346500 Sobic004G346500 Sobic006G184000--Sobic004G346500 Sobic006G281132 Sobic006G281132 Sobic006G184000--Sobic006G281132 Sobic002G028201 Sobic002G028201 Sobic006G184000--Sobic002G028201 Sobic008G156100 Sobic008G156100 Sobic006G184000--Sobic008G156100 Sobic009G146000 Sobic009G146000 Sobic006G184000--Sobic009G146000 Sobic002G353100--Sobic003G090650 Sobic002G353100--Sobic006G005800 Sobic002G353100--Sobic005G110900 Sobic002G353100--Sobic001G266100 Sobic002G353100--Sobic003G382400 Sobic002G353100--Sobic002G248300 Sobic002G353100--Sobic006G042500 Sobic002G353100--Sobic005G006500 Sobic002G353100--Sobic006G005900 Sobic002G183800--Sobic005G110900 Sobic002G183800--Sobic003G382400 Sobic009G037300 Sobic009G037300 Sobic002G183800--Sobic009G037300 Sobic002G183800--Sobic001G266100 Sobic002G183800--Sobic002G353100 Sobic002G183800--Sobic008G012600 Sobic002G183800--Sobic003G090650 Sobic002G183800--Sobic006G042500 Sobic002G023700 Sobic002G023700 Sobic002G183800--Sobic002G023700
Octagon: transcription factors


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