Gene annotation
Transcriptome id Sobic.002G183800.1
Synonym Sb02g023160
Functional annotation L-ascorbate oxidase precursor, putative, expressed
UniProt C5XBA1
Pfam PF07731 PF00394
Panther DB PTHR11709 PTHR11709:SF28
NCBI CDD KOG1263; Multicopper oxidases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT4G39830 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os09g20090.1 : L-ascorbate oxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039744 , Zm00025a046704 , Zm00025a046705
Brachypodium KQJ90009 , KQJ90932
Barley HORVU5Hr1G057800.4 , HORVU5Hr1G057800.6 , HORVU5Hr1G057800.5 , HORVU5Hr1G057800.3 , HORVU5Hr1G057800.2 , HORVU5Hr1G057800.1
Wheat TraesCS5A02G191200 , TraesCS3A02G452400 , TraesCS5B02G192000 , TraesCS5B02G192000 , TraesCS5D02G199900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110900 expressed protein -
2 Sobic.003G382400 MLO domain containing protein, putative, expressed K08472: mlo protein
3 Sobic.009G037300 transferase family protein, putative, expressed -
4 Sobic.001G266100 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
5 Sobic.002G353100 expressed protein -
6 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
7 Sobic.003G090650 - -
8 Sobic.006G042500 U-box domain-containing protein, putative, expressed -
9 Sobic.002G023700 expressed protein -
10 Sobic.010G049600 expressed protein -
11 Sobic.006G160800 YABBY domain containing protein, putative, expressed -
12 Sobic.006G005800 expressed protein -
13 Sobic.008G004200 MYB family transcription factor, putative, expressed -
14 Sobic.001G491400 cytochrome P450, putative, expressed -
15 Sobic.002G129100 LTPL27 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
16 Sobic.006G237800 jp18, putative, expressed -
17 Sobic.001G447800 OsFBO13 - F-box and other domain containing protein, expressed -
18 Sobic.004G118100 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
20 Sobic.008G013400 nodulin, putative, expressed -


Gene co-expression network
sample Sobic002G183800 Sobic002G183800 Sobic005G110900 Sobic005G110900 Sobic002G183800--Sobic005G110900 Sobic003G382400 Sobic003G382400 Sobic002G183800--Sobic003G382400 Sobic009G037300 Sobic009G037300 Sobic002G183800--Sobic009G037300 Sobic001G266100 Sobic001G266100 Sobic002G183800--Sobic001G266100 Sobic002G353100 Sobic002G353100 Sobic002G183800--Sobic002G353100 Sobic008G012600 Sobic008G012600 Sobic002G183800--Sobic008G012600 Sobic003G090650 Sobic003G090650 Sobic002G183800--Sobic003G090650 Sobic006G042500 Sobic006G042500 Sobic002G183800--Sobic006G042500 Sobic002G023700 Sobic002G023700 Sobic002G183800--Sobic002G023700 Sobic005G110900--Sobic008G012600 Sobic005G110900--Sobic001G266100 Sobic005G110900--Sobic003G382400 Sobic005G110900--Sobic002G353100 Sobic005G218000 Sobic005G218000 Sobic005G110900--Sobic005G218000 Sobic006G160800 Sobic006G160800 Sobic005G110900--Sobic006G160800 Sobic006G005800 Sobic006G005800 Sobic005G110900--Sobic006G005800 Sobic005G110900--Sobic003G090650 Sobic005G110900--Sobic002G183800 Sobic003G382400--Sobic001G266100 Sobic003G382400--Sobic005G110900 Sobic003G382400--Sobic005G218000 Sobic004G118100 Sobic004G118100 Sobic003G382400--Sobic004G118100 Sobic010G049600 Sobic010G049600 Sobic003G382400--Sobic010G049600 Sobic001G491400 Sobic001G491400 Sobic003G382400--Sobic001G491400 Sobic008G013400 Sobic008G013400 Sobic003G382400--Sobic008G013400 Sobic003G382400--Sobic008G012600 Sobic003G382400--Sobic006G160800 Sobic009G037300--Sobic002G183800 Sobic010G027700 Sobic010G027700 Sobic009G037300--Sobic010G027700 Sobic009G037300--Sobic008G012600 Sobic009G037300--Sobic002G023700 Sobic009G037300--Sobic005G110900 Sobic003G120600 Sobic003G120600 Sobic009G037300--Sobic003G120600 Sobic007G125400 Sobic007G125400 Sobic009G037300--Sobic007G125400 Sobic009G254500 Sobic009G254500 Sobic009G037300--Sobic009G254500 Sobic009G037300--Sobic001G266100 Sobic001G266100--Sobic010G049600 Sobic001G266100--Sobic001G491400 Sobic005G200700 Sobic005G200700 Sobic001G266100--Sobic005G200700 Sobic007G049100 Sobic007G049100 Sobic001G266100--Sobic007G049100 Sobic001G266100--Sobic004G118100 Sobic001G334501 Sobic001G334501 Sobic001G266100--Sobic001G334501 Sobic001G266100--Sobic008G012600 Sobic002G399600 Sobic002G399600 Sobic001G266100--Sobic002G399600 Sobic010G215700 Sobic010G215700 Sobic001G266100--Sobic010G215700 Sobic002G353100--Sobic003G090650 Sobic002G353100--Sobic006G005800 Sobic002G353100--Sobic005G110900 Sobic002G353100--Sobic001G266100 Sobic002G353100--Sobic003G382400 Sobic002G248300 Sobic002G248300 Sobic002G353100--Sobic002G248300 Sobic002G353100--Sobic006G042500 Sobic005G006500 Sobic005G006500 Sobic002G353100--Sobic005G006500 Sobic006G005900 Sobic006G005900 Sobic002G353100--Sobic006G005900 Sobic008G012600--Sobic006G160800 Sobic008G012600--Sobic001G266100 Sobic008G012600--Sobic005G110900 Sobic008G012600--Sobic010G049600 Sobic008G012600--Sobic001G491400 Sobic008G012600--Sobic005G218000 Sobic008G012600--Sobic010G215700 Sobic008G004200 Sobic008G004200 Sobic008G012600--Sobic008G004200 Sobic008G012600--Sobic009G254500 Sobic003G090650--Sobic002G353100 Sobic003G090650--Sobic006G005800 Sobic003G090650--Sobic002G248300 Sobic003G090650--Sobic005G110900 Sobic003G090650--Sobic006G042500 Sobic004G309700 Sobic004G309700 Sobic003G090650--Sobic004G309700 Sobic003G090650--Sobic006G005900 Sobic003G090650--Sobic005G006500 Sobic003G090650--Sobic002G183800 Sobic006G042500--Sobic003G090650 Sobic006G042500--Sobic002G353100 Sobic006G042500--Sobic003G382400 Sobic006G042500--Sobic002G183800 Sobic006G042500--Sobic005G110900 Sobic006G042500--Sobic006G005800 Sobic006G042500--Sobic001G266100 Sobic001G447800 Sobic001G447800 Sobic006G042500--Sobic001G447800 Sobic006G042500--Sobic002G248300 Sobic002G023700--Sobic010G027700 Sobic002G023700--Sobic009G037300 Sobic002G023700--Sobic008G012600 Sobic004G215000 Sobic004G215000 Sobic002G023700--Sobic004G215000 Sobic001G438500 Sobic001G438500 Sobic002G023700--Sobic001G438500 Sobic002G023700--Sobic002G183800 Sobic002G023700--Sobic001G266100 Sobic002G023700--Sobic008G004200 Sobic002G023700--Sobic009G254500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.