Gene annotation
| Transcriptome id |
Sobic.006G042500.1 |
| Synonym |
Sb06g010430, ATPUB9, PUB9 |
| Functional annotation |
U-box domain-containing protein, putative, expressed |
| UniProt |
C5YE63 |
| Pfam |
PF04564 |
| Panther DB |
PTHR23315
PTHR23315:SF82 |
| NCBI CDD |
- |
| KEGG Orthology |
- |
| Gene Ontology |
GO:0016567; protein ubiquitination
GO:0004842ubiquitin-protein transferase activity |
Orthologs (automatic annotation)
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
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Find similar expressed genes
| Top 20 genes with similar expressed profiles |
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| Rank |
Gene |
Function |
KEGG orthology |
| 1 |
Sobic.003G090650 |
- |
- |
| 2 |
Sobic.002G353100 |
expressed protein |
- |
| 3 |
Sobic.003G382400 |
MLO domain containing protein, putative, expressed |
K08472: mlo protein |
| 4 |
Sobic.002G183800 |
L-ascorbate oxidase precursor, putative, expressed |
- |
| 5 |
Sobic.005G110900 |
expressed protein |
- |
| 6 |
Sobic.006G005800 |
expressed protein |
- |
| 7 |
Sobic.001G266100 |
POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed |
- |
| 8 |
Sobic.001G447800 |
OsFBO13 - F-box and other domain containing protein, expressed |
- |
| 9 |
Sobic.002G248300 |
polygalacturonase inhibitor 1 precursor, putative, expressed |
- |
| 10 |
Sobic.009G052300 |
suppressor of Mek, putative, expressed |
K17491: SMEK, protein phosphatase 4 regulatory subunit 3 |
| 11 |
Sobic.005G006500 |
- |
- |
| 12 |
Sobic.006G005900 |
OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed |
K09646: serine carboxypeptidase 1 |
| 13 |
Sobic.008G012600 |
BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed |
K14508: regulatory protein NPR1 |
| 14 |
Sobic.008G013400 |
nodulin, putative, expressed |
- |
| 15 |
Sobic.004G309700 |
OsMan03 - Endo-Beta-Mannanase, expressed |
K19355: mannan endo-1,4-beta-mannosidase |
| 16 |
Sobic.010G049600 |
expressed protein |
- |
| 17 |
Sobic.008G004200 |
MYB family transcription factor, putative, expressed |
- |
| 18 |
Sobic.001G491400 |
cytochrome P450, putative, expressed |
- |
| 19 |
Sobic.004G118100 |
harpin-induced protein 1 domain containing protein, expressed |
- |
| 20 |
Sobic.009G037300 |
transferase family protein, putative, expressed |
- |
Gene co-expression network
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Octagon: transcription factors