Gene annotation
Transcriptome id Sobic.004G309700.1,Sobic.004G309700.3
Synonym Sb04g034200
Functional annotation OsMan03 - Endo-Beta-Mannanase, expressed
UniProt A0A194YSJ6 , A0A194YTK1
Pfam PF00150
Panther DB PTHR31451 PTHR31451:SF18
NCBI CDD -
KEGG Orthology K19355; mannan endo-1,4-beta-mannosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G66460 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os02g52800.1 : OsMan03 - Endo-Beta-Mannanase, expressed
MaizeGDB (Corn) Zm00025a033094
Brachypodium KQK01741
Barley HORVU0Hr1G017220.2 , HORVU0Hr1G017220.3 , HORVU0Hr1G017220.1 , HORVU0Hr1G017220.4
Wheat TraesCS6B02G363700 , TraesCS6D02G312600 , TraesCS6A02G333300 , TraesCS6B02G363900 , TraesCS6D02G311900 , TraesCS6A02G333500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G090650 - -
2 Sobic.009G146000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -
3 Sobic.006G281132 - -
4 Sobic.002G028201 - K10523: speckle-type POZ protein
5 Sobic.008G156100 ankyrin repeat domain-containing protein 44, putative, expressed -
6 Sobic.002G353100 expressed protein -
7 Sobic.002G248300 polygalacturonase inhibitor 1 precursor, putative, expressed -
8 Sobic.005G006000 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
9 Sobic.006G005800 expressed protein -
10 Sobic.003G367100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
11 Sobic.005G006500 - -
12 Sobic.006G005900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
13 Sobic.003G098100 aquaporin protein, putative, expressed K09874: aquaporin NIP
14 Sobic.006G042500 U-box domain-containing protein, putative, expressed -
15 Sobic.005G197200 - -
16 Sobic.006G184000 cytochrome P450, putative, expressed -
17 Sobic.009G048600 - -
18 Sobic.005G110900 expressed protein -
19 Sobic.008G154900 expressed protein -
20 Sobic.006G005700 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1


Gene co-expression network
sample Sobic004G309700 Sobic004G309700 Sobic003G090650 Sobic003G090650 Sobic004G309700--Sobic003G090650 Sobic009G146000 Sobic009G146000 Sobic004G309700--Sobic009G146000 Sobic006G281132 Sobic006G281132 Sobic004G309700--Sobic006G281132 Sobic002G028201 Sobic002G028201 Sobic004G309700--Sobic002G028201 Sobic008G156100 Sobic008G156100 Sobic004G309700--Sobic008G156100 Sobic002G353100 Sobic002G353100 Sobic004G309700--Sobic002G353100 Sobic002G248300 Sobic002G248300 Sobic004G309700--Sobic002G248300 Sobic005G006000 Sobic005G006000 Sobic004G309700--Sobic005G006000 Sobic006G005800 Sobic006G005800 Sobic004G309700--Sobic006G005800 Sobic003G090650--Sobic002G353100 Sobic003G090650--Sobic006G005800 Sobic003G090650--Sobic002G248300 Sobic005G110900 Sobic005G110900 Sobic003G090650--Sobic005G110900 Sobic006G042500 Sobic006G042500 Sobic003G090650--Sobic006G042500 Sobic003G090650--Sobic004G309700 Sobic006G005900 Sobic006G005900 Sobic003G090650--Sobic006G005900 Sobic005G006500 Sobic005G006500 Sobic003G090650--Sobic005G006500 Sobic002G183800 Sobic002G183800 Sobic003G090650--Sobic002G183800 Sobic009G146000--Sobic006G281132 Sobic009G146000--Sobic002G028201 Sobic009G146000--Sobic008G156100 Sobic009G146000--Sobic005G006000 Sobic003G098100 Sobic003G098100 Sobic009G146000--Sobic003G098100 Sobic009G048600 Sobic009G048600 Sobic009G146000--Sobic009G048600 Sobic003G367100 Sobic003G367100 Sobic009G146000--Sobic003G367100 Sobic006G005700 Sobic006G005700 Sobic009G146000--Sobic006G005700 Sobic001G266600 Sobic001G266600 Sobic009G146000--Sobic001G266600 Sobic006G281132--Sobic002G028201 Sobic006G281132--Sobic008G156100 Sobic006G281132--Sobic005G006000 Sobic006G281132--Sobic009G146000 Sobic006G281132--Sobic009G048600 Sobic006G281132--Sobic006G005700 Sobic006G281132--Sobic001G266600 Sobic006G281132--Sobic003G367100 Sobic006G281132--Sobic003G098100 Sobic002G028201--Sobic008G156100 Sobic002G028201--Sobic006G281132 Sobic002G028201--Sobic005G006000 Sobic002G028201--Sobic009G146000 Sobic002G028201--Sobic009G048600 Sobic002G028201--Sobic006G005700 Sobic002G028201--Sobic001G266600 Sobic002G028201--Sobic003G367100 Sobic002G028201--Sobic003G098100 Sobic008G156100--Sobic002G028201 Sobic008G156100--Sobic006G281132 Sobic008G156100--Sobic005G006000 Sobic008G156100--Sobic009G146000 Sobic008G156100--Sobic009G048600 Sobic008G156100--Sobic006G005700 Sobic008G156100--Sobic001G266600 Sobic008G156100--Sobic003G367100 Sobic008G156100--Sobic003G098100 Sobic002G353100--Sobic003G090650 Sobic002G353100--Sobic006G005800 Sobic002G353100--Sobic005G110900 Sobic001G266100 Sobic001G266100 Sobic002G353100--Sobic001G266100 Sobic003G382400 Sobic003G382400 Sobic002G353100--Sobic003G382400 Sobic002G353100--Sobic002G248300 Sobic002G353100--Sobic006G042500 Sobic002G353100--Sobic005G006500 Sobic002G353100--Sobic006G005900 Sobic002G248300--Sobic005G006500 Sobic002G129800 Sobic002G129800 Sobic002G248300--Sobic002G129800 Sobic005G164000 Sobic005G164000 Sobic002G248300--Sobic005G164000 Sobic002G248300--Sobic003G090650 Sobic002G248300--Sobic002G353100 Sobic002G248300--Sobic006G005800 Sobic002G248300--Sobic004G309700 Sobic003G140100 Sobic003G140100 Sobic002G248300--Sobic003G140100 Sobic002G248300--Sobic005G110900 Sobic005G006000--Sobic008G156100 Sobic005G006000--Sobic002G028201 Sobic005G006000--Sobic006G281132 Sobic005G006000--Sobic009G048600 Sobic005G006000--Sobic009G146000 Sobic005G006000--Sobic001G266600 Sobic005G006000--Sobic006G005700 Sobic005G006000--Sobic003G367100 Sobic005G006000--Sobic003G098100 Sobic006G005800--Sobic002G353100 Sobic006G005800--Sobic003G090650 Sobic008G154900 Sobic008G154900 Sobic006G005800--Sobic008G154900 Sobic006G005800--Sobic005G110900 Sobic006G005800--Sobic006G005900 Sobic006G005800--Sobic001G266100 Sobic006G005800--Sobic003G382400 Sobic005G218000 Sobic005G218000 Sobic006G005800--Sobic005G218000 Sobic003G011700 Sobic003G011700 Sobic006G005800--Sobic003G011700
Octagon: transcription factors


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