Gene annotation
Transcriptome id Sobic.006G160800.1
Synonym Sb06g023770, YAB5
Functional annotation YABBY domain containing protein, putative, expressed
UniProt C5YCY5
Pfam PF04690
Panther DB PTHR31675 PTHR31675:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development


Orthologs (automatic annotation)
TAIR AT2G45190 : Plant-specific transcription factor YABBY family protein
RAP-DB (Rice) LOC_Os04g45330.1 : YABBY domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a056602 , Zm00025a010430
Brachypodium KQJ83797
Barley HORVU2Hr1G092010.1 , HORVU2Hr1G092010.2 , HORVU2Hr1G092000.2
Wheat TraesCS6A02G237700 , TraesCS2B02G403100 , TraesCS6B02G266200 , TraesCS6D02G220400 , TraesCS6D02G220400 , TraesCS2D02G382700 , TraesCS2A02G386200 , TraesCS6B02G266200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
2 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
3 Sobic.010G049600 expressed protein -
4 Sobic.001G266100 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
5 Sobic.001G491400 cytochrome P450, putative, expressed -
6 Sobic.010G050100 expressed protein -
7 Sobic.006G151800 OsRR5 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
8 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.001G152400 expressed protein -
10 Sobic.005G042200 homeobox domain containing protein, expressed -
11 Sobic.005G200700 dirigent, putative, expressed -
12 Sobic.009G046000 desiccation-related protein PCC13-62 precursor, putative, expressed -
13 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
14 Sobic.007G049100 expressed protein -
15 Sobic.010G236000 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
16 Sobic.002G399600 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G251200 dihydroflavonol-4-reductase, putative, expressed -
18 Sobic.002G029700 DUF640 domain containing protein, putative, expressed -
19 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
20 Sobic.005G226500 thaumatin family domain containing protein, expressed -


Gene co-expression network
sample Sobic006G160800 Sobic006G160800 Sobic008G012600 Sobic008G012600 Sobic006G160800--Sobic008G012600 Sobic010G215700 Sobic010G215700 Sobic006G160800--Sobic010G215700 Sobic010G049600 Sobic010G049600 Sobic006G160800--Sobic010G049600 Sobic001G266100 Sobic001G266100 Sobic006G160800--Sobic001G266100 Sobic001G491400 Sobic001G491400 Sobic006G160800--Sobic001G491400 Sobic010G050100 Sobic010G050100 Sobic006G160800--Sobic010G050100 Sobic006G151800 Sobic006G151800 Sobic006G160800--Sobic006G151800 Sobic007G029900 Sobic007G029900 Sobic006G160800--Sobic007G029900 Sobic001G152400 Sobic001G152400 Sobic006G160800--Sobic001G152400 Sobic008G012600--Sobic006G160800 Sobic008G012600--Sobic001G266100 Sobic005G110900 Sobic005G110900 Sobic008G012600--Sobic005G110900 Sobic008G012600--Sobic010G049600 Sobic008G012600--Sobic001G491400 Sobic005G218000 Sobic005G218000 Sobic008G012600--Sobic005G218000 Sobic008G012600--Sobic010G215700 Sobic008G004200 Sobic008G004200 Sobic008G012600--Sobic008G004200 Sobic009G254500 Sobic009G254500 Sobic008G012600--Sobic009G254500 Sobic002G251200 Sobic002G251200 Sobic010G215700--Sobic002G251200 Sobic005G226500 Sobic005G226500 Sobic010G215700--Sobic005G226500 Sobic001G334501 Sobic001G334501 Sobic010G215700--Sobic001G334501 Sobic002G399600 Sobic002G399600 Sobic010G215700--Sobic002G399600 Sobic007G037400 Sobic007G037400 Sobic010G215700--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic010G215700--Sobic007G107500 Sobic006G006900 Sobic006G006900 Sobic010G215700--Sobic006G006900 Sobic002G270400 Sobic002G270400 Sobic010G215700--Sobic002G270400 Sobic007G098600 Sobic007G098600 Sobic010G215700--Sobic007G098600 Sobic010G049600--Sobic001G491400 Sobic005G200700 Sobic005G200700 Sobic010G049600--Sobic005G200700 Sobic007G049100 Sobic007G049100 Sobic010G049600--Sobic007G049100 Sobic010G049600--Sobic001G266100 Sobic010G049600--Sobic002G399600 Sobic010G049600--Sobic001G334501 Sobic010G049600--Sobic005G226500 Sobic010G049600--Sobic007G107500 Sobic010G049600--Sobic002G270400 Sobic001G266100--Sobic010G049600 Sobic001G266100--Sobic001G491400 Sobic001G266100--Sobic005G200700 Sobic001G266100--Sobic007G049100 Sobic004G118100 Sobic004G118100 Sobic001G266100--Sobic004G118100 Sobic001G266100--Sobic001G334501 Sobic001G266100--Sobic008G012600 Sobic001G266100--Sobic002G399600 Sobic001G266100--Sobic010G215700 Sobic001G491400--Sobic010G049600 Sobic001G491400--Sobic005G200700 Sobic001G491400--Sobic002G399600 Sobic001G491400--Sobic007G049100 Sobic001G491400--Sobic001G334501 Sobic001G491400--Sobic005G226500 Sobic001G491400--Sobic002G270400 Sobic001G491400--Sobic007G107500 Sobic001G491400--Sobic007G037400 Sobic010G236000 Sobic010G236000 Sobic010G050100--Sobic010G236000 Sobic005G090100 Sobic005G090100 Sobic010G050100--Sobic005G090100 Sobic010G050100--Sobic005G200700 Sobic010G050100--Sobic002G399600 Sobic004G001700 Sobic004G001700 Sobic010G050100--Sobic004G001700 Sobic009G074900 Sobic009G074900 Sobic010G050100--Sobic009G074900 Sobic010G050100--Sobic005G226500 Sobic010G050100--Sobic007G107500 Sobic010G050100--Sobic007G037400 Sobic002G029700 Sobic002G029700 Sobic006G151800--Sobic002G029700 Sobic006G151800--Sobic001G334501 Sobic006G098300 Sobic006G098300 Sobic006G151800--Sobic006G098300 Sobic006G151800--Sobic007G037400 Sobic006G151800--Sobic007G107500 Sobic003G088200 Sobic003G088200 Sobic006G151800--Sobic003G088200 Sobic006G151800--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic006G151800--Sobic001G133200 Sobic007G029900--Sobic006G098300 Sobic007G029900--Sobic002G399600 Sobic007G206000 Sobic007G206000 Sobic007G029900--Sobic007G206000 Sobic007G029900--Sobic002G270400 Sobic007G029900--Sobic005G200700 Sobic007G029900--Sobic005G226500 Sobic007G029900--Sobic001G334501 Sobic007G029900--Sobic007G107500 Sobic007G029900--Sobic007G037400 Sobic009G046000 Sobic009G046000 Sobic001G152400--Sobic009G046000 Sobic001G152400--Sobic010G049600 Sobic001G152400--Sobic005G200700 Sobic001G152400--Sobic010G215700 Sobic001G152400--Sobic001G491400 Sobic001G366000 Sobic001G366000 Sobic001G152400--Sobic001G366000 Sobic001G152400--Sobic007G029900 Sobic007G000600 Sobic007G000600 Sobic001G152400--Sobic007G000600 Sobic001G152400--Sobic002G399600
Octagon: transcription factors


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