Gene annotation
Transcriptome id Sobic.005G042200.1
Synonym WOX1, Sb05g003490
Functional annotation homeobox domain containing protein, expressed
UniProt A0A1Z5RGL8
Pfam PF00046
Panther DB PTHR24326 PTHR24326:SF115
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT2G28610 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os11g01130.2 : homeobox domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009417 , Zm00025a012986 , Zm00025a057205 , Zm00025a033532 , Zm00025a026819 , Zm00025a039612 , Zm00025a026917
Brachypodium KQJ85141 , KQJ84981 , KQJ92701 , KQK10633 , KQK07789
Barley HORVU1Hr1G010580.3 , HORVU1Hr1G010580.2 , HORVU1Hr1G010580.1 , HORVU3Hr1G085050.1 , HORVU3Hr1G085050.3 , HORVU3Hr1G085050.4 , HORVU3Hr1G086450.1 , HORVU5Hr1G049190.2 , HORVU5Hr1G049190.3 , HORVU5Hr1G049190.1 , HORVU5Hr1G022120.1 , HORVU2Hr1G113820.8 , HORVU2Hr1G113820.2 , HORVU2Hr1G113820.5 , HORVU2Hr1G113820.4 , HORVU2Hr1G113820.7
Wheat TraesCS3A02G368100 , TraesCS3B02G391100 , TraesCS3D02G352500 , TraesCS5B02G156400 , TraesCS5D02G097400 , TraesCS1A02G052000 , TraesCS3D02G352600 , TraesCS2A02G491900 , TraesCS5A02G157300 , TraesCS2B02G542600 , TraesCS3B02G399800 , TraesCS2D02G515600 , TraesCS2A02G514000 , TraesCS5D02G162600 , TraesCS5B02G091000 , TraesCS3A02G358200 , TraesCS5A02G085000 , TraesCS3D02G361100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
2 Sobic.006G151800 OsRR5 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
3 Sobic.002G380800 - -
4 Sobic.002G410600 - -
5 Sobic.003G038700 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
6 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
7 Sobic.003G038800 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
8 Sobic.002G251200 dihydroflavonol-4-reductase, putative, expressed -
9 Sobic.009G046000 desiccation-related protein PCC13-62 precursor, putative, expressed -
10 Sobic.005G200700 dirigent, putative, expressed -
11 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -
12 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
13 Sobic.007G037400 expressed protein -
14 Sobic.007G107500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.002G399600 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.006G006900 expressed protein -
18 Sobic.007G098600 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic005G042200 Sobic005G042200 Sobic010G215700 Sobic010G215700 Sobic005G042200--Sobic010G215700 Sobic006G151800 Sobic006G151800 Sobic005G042200--Sobic006G151800 Sobic002G380800 Sobic002G380800 Sobic005G042200--Sobic002G380800 Sobic002G410600 Sobic002G410600 Sobic005G042200--Sobic002G410600 Sobic003G038700 Sobic003G038700 Sobic005G042200--Sobic003G038700 Sobic001G334501 Sobic001G334501 Sobic005G042200--Sobic001G334501 Sobic003G038800 Sobic003G038800 Sobic005G042200--Sobic003G038800 Sobic002G251200 Sobic002G251200 Sobic005G042200--Sobic002G251200 Sobic009G046000 Sobic009G046000 Sobic005G042200--Sobic009G046000 Sobic010G215700--Sobic002G251200 Sobic005G226500 Sobic005G226500 Sobic010G215700--Sobic005G226500 Sobic010G215700--Sobic001G334501 Sobic002G399600 Sobic002G399600 Sobic010G215700--Sobic002G399600 Sobic007G037400 Sobic007G037400 Sobic010G215700--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic010G215700--Sobic007G107500 Sobic006G006900 Sobic006G006900 Sobic010G215700--Sobic006G006900 Sobic002G270400 Sobic002G270400 Sobic010G215700--Sobic002G270400 Sobic007G098600 Sobic007G098600 Sobic010G215700--Sobic007G098600 Sobic002G029700 Sobic002G029700 Sobic006G151800--Sobic002G029700 Sobic006G151800--Sobic001G334501 Sobic006G098300 Sobic006G098300 Sobic006G151800--Sobic006G098300 Sobic006G151800--Sobic007G037400 Sobic006G151800--Sobic007G107500 Sobic003G088200 Sobic003G088200 Sobic006G151800--Sobic003G088200 Sobic006G151800--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic006G151800--Sobic001G133200 Sobic002G380800--Sobic003G038800 Sobic002G380800--Sobic002G410600 Sobic002G380800--Sobic003G038700 Sobic002G035000 Sobic002G035000 Sobic002G380800--Sobic002G035000 Sobic009G075000 Sobic009G075000 Sobic002G380800--Sobic009G075000 Sobic002G380800--Sobic006G151800 Sobic010G189366 Sobic010G189366 Sobic002G380800--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic002G380800--Sobic004G349150 Sobic002G380800--Sobic009G046000 Sobic002G410600--Sobic003G038700 Sobic003G263800 Sobic003G263800 Sobic002G410600--Sobic003G263800 Sobic002G410600--Sobic007G098600 Sobic002G427550 Sobic002G427550 Sobic002G410600--Sobic002G427550 Sobic002G410600--Sobic001G133200 Sobic003G038700--Sobic002G410600 Sobic003G038700--Sobic001G133200 Sobic001G334501--Sobic002G399600 Sobic001G334501--Sobic002G270400 Sobic001G334501--Sobic007G037400 Sobic001G334501--Sobic007G107500 Sobic010G187400 Sobic010G187400 Sobic001G334501--Sobic010G187400 Sobic001G334501--Sobic006G006900 Sobic001G334501--Sobic005G226500 Sobic001G334501--Sobic007G098600 Sobic001G334501--Sobic001G133200 Sobic003G038800--Sobic002G410600 Sobic003G038800--Sobic003G038700 Sobic003G038800--Sobic002G380800 Sobic007G206000 Sobic007G206000 Sobic003G038800--Sobic007G206000 Sobic003G038800--Sobic009G046000 Sobic005G200700 Sobic005G200700 Sobic003G038800--Sobic005G200700 Sobic003G038800--Sobic001G133200 Sobic002G251200--Sobic007G098600 Sobic002G251200--Sobic001G133200 Sobic009G046000--Sobic002G410600 Sobic009G046000--Sobic003G038700 Sobic007G000600 Sobic007G000600 Sobic009G046000--Sobic007G000600 Sobic009G046000--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic009G046000--Sobic010G236000 Sobic008G032400 Sobic008G032400 Sobic009G046000--Sobic008G032400 Sobic009G046000--Sobic005G200700 Sobic009G046000--Sobic007G037400 Sobic009G046000--Sobic007G107500
Octagon: transcription factors


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