Gene annotation
Transcriptome id Sobic.002G380800.1
Synonym
Functional annotation -
UniProt C5X2G9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G038800 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.002G410600 - -
3 Sobic.003G038700 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
4 Sobic.002G035000 OsGrx_C10 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.009G075000 expressed protein -
6 Sobic.006G151800 OsRR5 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
7 Sobic.010G189366 - K01674: carbonic anhydrase
8 Sobic.004G349150 - -
9 Sobic.009G046000 desiccation-related protein PCC13-62 precursor, putative, expressed -
10 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -
11 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
12 Sobic.010G259400 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
13 Sobic.010G187400 ABC-2 type transporter domain containing protein, expressed -
14 Sobic.001G102600 regulatory protein, putative, expressed -
15 Sobic.008G032400 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.003G016000 LTPL18 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.004G001700 POEI25 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
18 Sobic.006G006900 expressed protein -
19 Sobic.003G088200 dihydroflavonol-4-reductase, putative, expressed -
20 Sobic.009G074900 expressed protein -


Gene co-expression network
sample Sobic002G380800 Sobic002G380800 Sobic003G038800 Sobic003G038800 Sobic002G380800--Sobic003G038800 Sobic002G410600 Sobic002G410600 Sobic002G380800--Sobic002G410600 Sobic003G038700 Sobic003G038700 Sobic002G380800--Sobic003G038700 Sobic002G035000 Sobic002G035000 Sobic002G380800--Sobic002G035000 Sobic009G075000 Sobic009G075000 Sobic002G380800--Sobic009G075000 Sobic006G151800 Sobic006G151800 Sobic002G380800--Sobic006G151800 Sobic010G189366 Sobic010G189366 Sobic002G380800--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic002G380800--Sobic004G349150 Sobic009G046000 Sobic009G046000 Sobic002G380800--Sobic009G046000 Sobic003G038800--Sobic002G410600 Sobic003G038800--Sobic003G038700 Sobic003G038800--Sobic002G380800 Sobic007G206000 Sobic007G206000 Sobic003G038800--Sobic007G206000 Sobic003G038800--Sobic009G046000 Sobic005G200700 Sobic005G200700 Sobic003G038800--Sobic005G200700 Sobic001G133200 Sobic001G133200 Sobic003G038800--Sobic001G133200 Sobic002G410600--Sobic003G038700 Sobic003G263800 Sobic003G263800 Sobic002G410600--Sobic003G263800 Sobic007G098600 Sobic007G098600 Sobic002G410600--Sobic007G098600 Sobic002G427550 Sobic002G427550 Sobic002G410600--Sobic002G427550 Sobic002G410600--Sobic001G133200 Sobic003G038700--Sobic002G410600 Sobic003G038700--Sobic001G133200 Sobic002G035000--Sobic002G380800 Sobic002G035000--Sobic003G038800 Sobic002G035000--Sobic009G046000 Sobic002G035000--Sobic002G410600 Sobic002G035000--Sobic003G038700 Sobic002G035000--Sobic006G151800 Sobic005G042200 Sobic005G042200 Sobic002G035000--Sobic005G042200 Sobic002G035000--Sobic007G206000 Sobic005G090100 Sobic005G090100 Sobic002G035000--Sobic005G090100 Sobic010G259400 Sobic010G259400 Sobic009G075000--Sobic010G259400 Sobic003G016000 Sobic003G016000 Sobic009G075000--Sobic003G016000 Sobic003G088200 Sobic003G088200 Sobic009G075000--Sobic003G088200 Sobic009G074900 Sobic009G074900 Sobic009G075000--Sobic009G074900 Sobic009G075000--Sobic003G263800 Sobic009G075000--Sobic001G133200 Sobic002G029700 Sobic002G029700 Sobic006G151800--Sobic002G029700 Sobic001G334501 Sobic001G334501 Sobic006G151800--Sobic001G334501 Sobic006G098300 Sobic006G098300 Sobic006G151800--Sobic006G098300 Sobic007G037400 Sobic007G037400 Sobic006G151800--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic006G151800--Sobic007G107500 Sobic006G151800--Sobic003G088200 Sobic006G151800--Sobic007G098600 Sobic006G151800--Sobic001G133200 Sobic010G189366--Sobic004G349150 Sobic001G102600 Sobic001G102600 Sobic010G189366--Sobic001G102600 Sobic004G001700 Sobic004G001700 Sobic010G189366--Sobic004G001700 Sobic010G187400 Sobic010G187400 Sobic010G189366--Sobic010G187400 Sobic008G032400 Sobic008G032400 Sobic010G189366--Sobic008G032400 Sobic006G006900 Sobic006G006900 Sobic010G189366--Sobic006G006900 Sobic002G270400 Sobic002G270400 Sobic010G189366--Sobic002G270400 Sobic010G189366--Sobic001G133200 Sobic004G349150--Sobic010G189366 Sobic004G349150--Sobic010G187400 Sobic004G349150--Sobic004G001700 Sobic004G349150--Sobic008G032400 Sobic004G349150--Sobic006G006900 Sobic004G349150--Sobic002G270400 Sobic004G349150--Sobic003G263800 Sobic004G349150--Sobic002G427550 Sobic004G349150--Sobic001G133200 Sobic009G046000--Sobic002G410600 Sobic009G046000--Sobic003G038700 Sobic007G000600 Sobic007G000600 Sobic009G046000--Sobic007G000600 Sobic009G046000--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic009G046000--Sobic010G236000 Sobic009G046000--Sobic008G032400 Sobic009G046000--Sobic005G200700 Sobic009G046000--Sobic007G037400 Sobic009G046000--Sobic007G107500
Octagon: transcription factors


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