Gene annotation
Transcriptome id Sobic.002G035000.1
Synonym Sb02g003040, ROXY2
Functional annotation OsGrx_C10 - glutaredoxin subgroup III, expressed
UniProt C5X9J9
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF86
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology K03676; grxC, GLRX, glutaredoxin 3
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT4G15660 : Thioredoxin superfamily protein
RAP-DB (Rice) ChrUn.fgenesh.mRNA.94 : expressed protein
MaizeGDB (Corn) Zm00025a045022
Brachypodium -
Barley HORVU2Hr1G060300.1 , HORVU2Hr1G060300.3 , HORVU2Hr1G060300.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G380800 - -
2 Sobic.003G038800 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
3 Sobic.009G046000 desiccation-related protein PCC13-62 precursor, putative, expressed -
4 Sobic.002G410600 - -
5 Sobic.003G038700 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
6 Sobic.006G151800 OsRR5 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
7 Sobic.005G042200 homeobox domain containing protein, expressed -
8 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
9 Sobic.005G090100 expressed protein -
10 Sobic.009G075000 expressed protein -
11 Sobic.010G259400 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.010G062200 expressed protein -
13 Sobic.003G016000 LTPL18 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -
15 Sobic.003G088200 dihydroflavonol-4-reductase, putative, expressed -
16 Sobic.004G202800 glycosyl hydrolase family 5 protein, putative, expressed -
17 Sobic.010G236000 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
18 Sobic.002G029700 DUF640 domain containing protein, putative, expressed -
19 Sobic.009G074900 expressed protein -
20 Sobic.003G263800 LTPL150 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic002G035000 Sobic002G035000 Sobic002G380800 Sobic002G380800 Sobic002G035000--Sobic002G380800 Sobic003G038800 Sobic003G038800 Sobic002G035000--Sobic003G038800 Sobic009G046000 Sobic009G046000 Sobic002G035000--Sobic009G046000 Sobic002G410600 Sobic002G410600 Sobic002G035000--Sobic002G410600 Sobic003G038700 Sobic003G038700 Sobic002G035000--Sobic003G038700 Sobic006G151800 Sobic006G151800 Sobic002G035000--Sobic006G151800 Sobic005G042200 Sobic005G042200 Sobic002G035000--Sobic005G042200 Sobic007G206000 Sobic007G206000 Sobic002G035000--Sobic007G206000 Sobic005G090100 Sobic005G090100 Sobic002G035000--Sobic005G090100 Sobic002G380800--Sobic003G038800 Sobic002G380800--Sobic002G410600 Sobic002G380800--Sobic003G038700 Sobic002G380800--Sobic002G035000 Sobic009G075000 Sobic009G075000 Sobic002G380800--Sobic009G075000 Sobic002G380800--Sobic006G151800 Sobic010G189366 Sobic010G189366 Sobic002G380800--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic002G380800--Sobic004G349150 Sobic002G380800--Sobic009G046000 Sobic003G038800--Sobic002G410600 Sobic003G038800--Sobic003G038700 Sobic003G038800--Sobic002G380800 Sobic003G038800--Sobic007G206000 Sobic003G038800--Sobic009G046000 Sobic005G200700 Sobic005G200700 Sobic003G038800--Sobic005G200700 Sobic001G133200 Sobic001G133200 Sobic003G038800--Sobic001G133200 Sobic009G046000--Sobic002G410600 Sobic009G046000--Sobic003G038700 Sobic007G000600 Sobic007G000600 Sobic009G046000--Sobic007G000600 Sobic009G046000--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic009G046000--Sobic010G236000 Sobic008G032400 Sobic008G032400 Sobic009G046000--Sobic008G032400 Sobic009G046000--Sobic005G200700 Sobic007G037400 Sobic007G037400 Sobic009G046000--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic009G046000--Sobic007G107500 Sobic002G410600--Sobic003G038700 Sobic003G263800 Sobic003G263800 Sobic002G410600--Sobic003G263800 Sobic007G098600 Sobic007G098600 Sobic002G410600--Sobic007G098600 Sobic002G427550 Sobic002G427550 Sobic002G410600--Sobic002G427550 Sobic002G410600--Sobic001G133200 Sobic003G038700--Sobic002G410600 Sobic003G038700--Sobic001G133200 Sobic002G029700 Sobic002G029700 Sobic006G151800--Sobic002G029700 Sobic001G334501 Sobic001G334501 Sobic006G151800--Sobic001G334501 Sobic006G098300 Sobic006G098300 Sobic006G151800--Sobic006G098300 Sobic006G151800--Sobic007G037400 Sobic006G151800--Sobic007G107500 Sobic003G088200 Sobic003G088200 Sobic006G151800--Sobic003G088200 Sobic006G151800--Sobic007G098600 Sobic006G151800--Sobic001G133200 Sobic010G215700 Sobic010G215700 Sobic005G042200--Sobic010G215700 Sobic005G042200--Sobic006G151800 Sobic005G042200--Sobic002G380800 Sobic005G042200--Sobic002G410600 Sobic005G042200--Sobic003G038700 Sobic005G042200--Sobic001G334501 Sobic005G042200--Sobic003G038800 Sobic002G251200 Sobic002G251200 Sobic005G042200--Sobic002G251200 Sobic005G042200--Sobic009G046000 Sobic007G206000--Sobic003G038700 Sobic005G226500 Sobic005G226500 Sobic007G206000--Sobic005G226500 Sobic007G206000--Sobic002G410600 Sobic007G206000--Sobic010G236000 Sobic007G206000--Sobic008G032400 Sobic006G006900 Sobic006G006900 Sobic007G206000--Sobic006G006900 Sobic007G206000--Sobic007G098600 Sobic007G206000--Sobic007G037400 Sobic007G206000--Sobic007G107500 Sobic005G090100--Sobic010G236000 Sobic005G090100--Sobic009G075000 Sobic003G016000 Sobic003G016000 Sobic005G090100--Sobic003G016000 Sobic010G259400 Sobic010G259400 Sobic005G090100--Sobic010G259400 Sobic007G049100 Sobic007G049100 Sobic005G090100--Sobic007G049100 Sobic004G001700 Sobic004G001700 Sobic005G090100--Sobic004G001700 Sobic005G090100--Sobic005G226500 Sobic005G090100--Sobic007G098600 Sobic005G090100--Sobic001G133200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.