Gene annotation
Transcriptome id Sobic.006G237800.1
Synonym Sb06g030460
Functional annotation jp18, putative, expressed
UniProt C5Y905
Pfam -
Panther DB PTHR33915 PTHR33915:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15760 : Sterile alpha motif (SAM) domain-containing protein
RAP-DB (Rice) LOC_Os04g55120.1 : jp18, putative, expressed
MaizeGDB (Corn) Zm00025a051374 , Zm00025a049813 , Zm00025a042063 , Zm00025a009568 , Zm00025a042873
Brachypodium KQK16789
Barley HORVU7Hr1G029260.1 , HORVU7Hr1G029260.2
Wheat -
Populus -


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cDNA sequences
Sobic.006G237800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G266100 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.010G049600 expressed protein -
3 Sobic.001G491400 cytochrome P450, putative, expressed -
4 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
5 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
6 Sobic.005G200700 dirigent, putative, expressed -
7 Sobic.007G049100 expressed protein -
8 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
9 Sobic.002G399600 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.004G118100 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.005G226500 thaumatin family domain containing protein, expressed -
12 Sobic.007G107500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.007G037400 expressed protein -
14 Sobic.001G438400 POEI16 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
15 Sobic.002G251200 dihydroflavonol-4-reductase, putative, expressed -
16 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
17 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.006G160800 YABBY domain containing protein, putative, expressed -
19 Sobic.010G236000 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
20 Sobic.010G187400 ABC-2 type transporter domain containing protein, expressed -


Gene co-expression network
sample Sobic006G237800 Sobic006G237800 Sobic001G266100 Sobic001G266100 Sobic006G237800--Sobic001G266100 Sobic010G049600 Sobic010G049600 Sobic006G237800--Sobic010G049600 Sobic001G491400 Sobic001G491400 Sobic006G237800--Sobic001G491400 Sobic010G215700 Sobic010G215700 Sobic006G237800--Sobic010G215700 Sobic008G012600 Sobic008G012600 Sobic006G237800--Sobic008G012600 Sobic005G200700 Sobic005G200700 Sobic006G237800--Sobic005G200700 Sobic007G049100 Sobic007G049100 Sobic006G237800--Sobic007G049100 Sobic001G334501 Sobic001G334501 Sobic006G237800--Sobic001G334501 Sobic002G399600 Sobic002G399600 Sobic006G237800--Sobic002G399600 Sobic001G266100--Sobic010G049600 Sobic001G266100--Sobic001G491400 Sobic001G266100--Sobic005G200700 Sobic001G266100--Sobic007G049100 Sobic004G118100 Sobic004G118100 Sobic001G266100--Sobic004G118100 Sobic001G266100--Sobic001G334501 Sobic001G266100--Sobic008G012600 Sobic001G266100--Sobic002G399600 Sobic001G266100--Sobic010G215700 Sobic010G049600--Sobic001G491400 Sobic010G049600--Sobic005G200700 Sobic010G049600--Sobic007G049100 Sobic010G049600--Sobic001G266100 Sobic010G049600--Sobic002G399600 Sobic010G049600--Sobic001G334501 Sobic005G226500 Sobic005G226500 Sobic010G049600--Sobic005G226500 Sobic007G107500 Sobic007G107500 Sobic010G049600--Sobic007G107500 Sobic002G270400 Sobic002G270400 Sobic010G049600--Sobic002G270400 Sobic001G491400--Sobic010G049600 Sobic001G491400--Sobic005G200700 Sobic001G491400--Sobic002G399600 Sobic001G491400--Sobic007G049100 Sobic001G491400--Sobic001G334501 Sobic001G491400--Sobic005G226500 Sobic001G491400--Sobic002G270400 Sobic001G491400--Sobic007G107500 Sobic007G037400 Sobic007G037400 Sobic001G491400--Sobic007G037400 Sobic002G251200 Sobic002G251200 Sobic010G215700--Sobic002G251200 Sobic010G215700--Sobic005G226500 Sobic010G215700--Sobic001G334501 Sobic010G215700--Sobic002G399600 Sobic010G215700--Sobic007G037400 Sobic010G215700--Sobic007G107500 Sobic006G006900 Sobic006G006900 Sobic010G215700--Sobic006G006900 Sobic010G215700--Sobic002G270400 Sobic007G098600 Sobic007G098600 Sobic010G215700--Sobic007G098600 Sobic006G160800 Sobic006G160800 Sobic008G012600--Sobic006G160800 Sobic008G012600--Sobic001G266100 Sobic005G110900 Sobic005G110900 Sobic008G012600--Sobic005G110900 Sobic008G012600--Sobic010G049600 Sobic008G012600--Sobic001G491400 Sobic005G218000 Sobic005G218000 Sobic008G012600--Sobic005G218000 Sobic008G012600--Sobic010G215700 Sobic008G004200 Sobic008G004200 Sobic008G012600--Sobic008G004200 Sobic009G254500 Sobic009G254500 Sobic008G012600--Sobic009G254500 Sobic005G200700--Sobic002G399600 Sobic005G200700--Sobic007G107500 Sobic005G200700--Sobic005G226500 Sobic005G200700--Sobic007G037400 Sobic005G200700--Sobic002G270400 Sobic010G187400 Sobic010G187400 Sobic005G200700--Sobic010G187400 Sobic005G200700--Sobic001G334501 Sobic005G200700--Sobic006G006900 Sobic007G000600 Sobic007G000600 Sobic005G200700--Sobic007G000600 Sobic007G049100--Sobic005G200700 Sobic007G049100--Sobic002G399600 Sobic007G049100--Sobic001G491400 Sobic009G075000 Sobic009G075000 Sobic007G049100--Sobic009G075000 Sobic003G016000 Sobic003G016000 Sobic007G049100--Sobic003G016000 Sobic007G049100--Sobic010G049600 Sobic007G049100--Sobic005G226500 Sobic007G049100--Sobic007G107500 Sobic007G049100--Sobic007G037400 Sobic001G334501--Sobic002G399600 Sobic001G334501--Sobic002G270400 Sobic001G334501--Sobic007G037400 Sobic001G334501--Sobic007G107500 Sobic001G334501--Sobic010G187400 Sobic001G334501--Sobic006G006900 Sobic001G334501--Sobic005G226500 Sobic001G334501--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic001G334501--Sobic001G133200 Sobic002G399600--Sobic002G270400 Sobic002G399600--Sobic007G107500 Sobic002G399600--Sobic007G037400 Sobic002G399600--Sobic005G226500 Sobic002G399600--Sobic006G006900 Sobic002G399600--Sobic010G187400 Sobic002G399600--Sobic007G098600 Sobic002G399600--Sobic001G133200
Octagon: transcription factors


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