Gene annotation
Transcriptome id Sobic.001G185000.1
Synonym Sb01g016060
Functional annotation NBS-LRR type disease resistance protein Rps1-k-1, putative, expressed
UniProt A0A1B6QJP0
Pfam PF13191 PF13855
Panther DB PTHR23155 PTHR23155:SF604
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os03g37720.1 : NBS-LRR type disease resistance protein Rps1-k-1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1A02G364900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G184000 cytochrome P450, putative, expressed -
2 Sobic.010G050500 OsMADS5 - MADS-box family gene with MIKCc type-box, expressed -
3 Sobic.001G447800 OsFBO13 - F-box and other domain containing protein, expressed -
4 Sobic.006G042500 U-box domain-containing protein, putative, expressed -
5 Sobic.003G090650 - -
6 Sobic.003G367100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
7 Sobic.009G052300 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
8 Sobic.005G006500 - -
9 Sobic.006G281132 - -
10 Sobic.002G028201 - K10523: speckle-type POZ protein
11 Sobic.008G156100 ankyrin repeat domain-containing protein 44, putative, expressed -
12 Sobic.009G146000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -
13 Sobic.002G353100 expressed protein -
14 Sobic.005G006000 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
15 Sobic.004G346500 heavy metal-associated domain containing protein, expressed -
16 Sobic.002G248300 polygalacturonase inhibitor 1 precursor, putative, expressed -
17 Sobic.004G309700 OsMan03 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
18 Sobic.009G153900 DUF623 domain containing protein, expressed -
19 Sobic.006G005900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
20 Sobic.003G098100 aquaporin protein, putative, expressed K09874: aquaporin NIP


Gene co-expression network
sample Sobic001G185000 Sobic001G185000 Sobic006G184000 Sobic006G184000 Sobic001G185000--Sobic006G184000 Sobic010G050500 Sobic010G050500 Sobic001G185000--Sobic010G050500 Sobic001G447800 Sobic001G447800 Sobic001G185000--Sobic001G447800 Sobic006G042500 Sobic006G042500 Sobic001G185000--Sobic006G042500 Sobic003G090650 Sobic003G090650 Sobic001G185000--Sobic003G090650 Sobic003G367100 Sobic003G367100 Sobic001G185000--Sobic003G367100 Sobic009G052300 Sobic009G052300 Sobic001G185000--Sobic009G052300 Sobic005G006500 Sobic005G006500 Sobic001G185000--Sobic005G006500 Sobic006G281132 Sobic006G281132 Sobic001G185000--Sobic006G281132 Sobic006G184000--Sobic010G050500 Sobic006G184000--Sobic001G185000 Sobic006G184000--Sobic001G447800 Sobic006G184000--Sobic003G090650 Sobic004G346500 Sobic004G346500 Sobic006G184000--Sobic004G346500 Sobic006G184000--Sobic006G281132 Sobic002G028201 Sobic002G028201 Sobic006G184000--Sobic002G028201 Sobic008G156100 Sobic008G156100 Sobic006G184000--Sobic008G156100 Sobic009G146000 Sobic009G146000 Sobic006G184000--Sobic009G146000 Sobic010G050500--Sobic006G184000 Sobic010G050500--Sobic001G185000 Sobic010G050500--Sobic006G281132 Sobic010G050500--Sobic002G028201 Sobic010G050500--Sobic008G156100 Sobic005G006000 Sobic005G006000 Sobic010G050500--Sobic005G006000 Sobic010G050500--Sobic009G146000 Sobic010G050500--Sobic004G346500 Sobic001G121400 Sobic001G121400 Sobic010G050500--Sobic001G121400 Sobic006G005900 Sobic006G005900 Sobic001G447800--Sobic006G005900 Sobic001G447800--Sobic003G090650 Sobic001G447800--Sobic006G042500 Sobic003G382400 Sobic003G382400 Sobic001G447800--Sobic003G382400 Sobic009G174100 Sobic009G174100 Sobic001G447800--Sobic009G174100 Sobic005G110900 Sobic005G110900 Sobic001G447800--Sobic005G110900 Sobic001G447800--Sobic006G184000 Sobic002G353100 Sobic002G353100 Sobic001G447800--Sobic002G353100 Sobic002G183800 Sobic002G183800 Sobic001G447800--Sobic002G183800 Sobic006G042500--Sobic003G090650 Sobic006G042500--Sobic002G353100 Sobic006G042500--Sobic003G382400 Sobic006G042500--Sobic002G183800 Sobic006G042500--Sobic005G110900 Sobic006G005800 Sobic006G005800 Sobic006G042500--Sobic006G005800 Sobic001G266100 Sobic001G266100 Sobic006G042500--Sobic001G266100 Sobic006G042500--Sobic001G447800 Sobic002G248300 Sobic002G248300 Sobic006G042500--Sobic002G248300 Sobic003G090650--Sobic002G353100 Sobic003G090650--Sobic006G005800 Sobic003G090650--Sobic002G248300 Sobic003G090650--Sobic005G110900 Sobic003G090650--Sobic006G042500 Sobic004G309700 Sobic004G309700 Sobic003G090650--Sobic004G309700 Sobic003G090650--Sobic006G005900 Sobic003G090650--Sobic005G006500 Sobic003G090650--Sobic002G183800 Sobic003G367100--Sobic006G281132 Sobic003G367100--Sobic002G028201 Sobic003G367100--Sobic008G156100 Sobic003G367100--Sobic005G006000 Sobic003G367100--Sobic009G146000 Sobic009G048600 Sobic009G048600 Sobic003G367100--Sobic009G048600 Sobic003G098100 Sobic003G098100 Sobic003G367100--Sobic003G098100 Sobic006G005700 Sobic006G005700 Sobic003G367100--Sobic006G005700 Sobic001G266600 Sobic001G266600 Sobic003G367100--Sobic001G266600 Sobic009G153900 Sobic009G153900 Sobic009G052300--Sobic009G153900 Sobic009G052300--Sobic003G382400 Sobic009G052300--Sobic005G006500 Sobic009G052300--Sobic005G110900 Sobic009G052300--Sobic006G005800 Sobic009G052300--Sobic001G266100 Sobic007G179000 Sobic007G179000 Sobic009G052300--Sobic007G179000 Sobic009G052300--Sobic006G042500 Sobic009G052300--Sobic002G353100 Sobic005G006500--Sobic002G248300 Sobic005G164000 Sobic005G164000 Sobic005G006500--Sobic005G164000 Sobic002G129800 Sobic002G129800 Sobic005G006500--Sobic002G129800 Sobic005G006500--Sobic002G353100 Sobic005G006500--Sobic003G090650 Sobic003G140100 Sobic003G140100 Sobic005G006500--Sobic003G140100 Sobic005G006500--Sobic004G346500 Sobic005G006500--Sobic006G005800 Sobic005G006500--Sobic001G266100 Sobic006G281132--Sobic002G028201 Sobic006G281132--Sobic008G156100 Sobic006G281132--Sobic005G006000 Sobic006G281132--Sobic009G146000 Sobic006G281132--Sobic009G048600 Sobic006G281132--Sobic006G005700 Sobic006G281132--Sobic001G266600 Sobic006G281132--Sobic003G367100 Sobic006G281132--Sobic003G098100
Octagon: transcription factors


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