Gene annotation
Transcriptome id Sobic.010G048800.1
Synonym Sb10g004250
Functional annotation expressed protein
UniProt C5Z4S2
Pfam PF04601
Panther DB PTHR31205 PTHR31205:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27100 : Actin cross-linking protein
RAP-DB (Rice) LOC_Os06g06580.1 : expressed protein
MaizeGDB (Corn) Zm00025a049939
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
2 Sobic.007G076100 transferase family protein, putative, expressed -
3 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
4 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
5 Sobic.010G048200 expressed protein -
6 Sobic.004G318800 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
7 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.006G079500 AMP-binding domain containing protein, expressed -
9 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.005G118700 expressed protein -
11 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
12 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
13 Sobic.003G382400 MLO domain containing protein, putative, expressed K08472: mlo protein
14 Sobic.010G050100 expressed protein -
15 Sobic.001G491400 cytochrome P450, putative, expressed -
16 Sobic.010G236000 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
17 Sobic.004G324500 expressed protein -
18 Sobic.010G049600 expressed protein -
19 Sobic.009G074900 expressed protein -
20 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase


Gene co-expression network
sample Sobic010G048800 Sobic010G048800 Sobic005G218000 Sobic005G218000 Sobic010G048800--Sobic005G218000 Sobic007G076100 Sobic007G076100 Sobic010G048800--Sobic007G076100 Sobic001G341700 Sobic001G341700 Sobic010G048800--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic010G048800--Sobic002G312200 Sobic010G048200 Sobic010G048200 Sobic010G048800--Sobic010G048200 Sobic004G318800 Sobic004G318800 Sobic010G048800--Sobic004G318800 Sobic006G089700 Sobic006G089700 Sobic010G048800--Sobic006G089700 Sobic006G079500 Sobic006G079500 Sobic010G048800--Sobic006G079500 Sobic003G178500 Sobic003G178500 Sobic010G048800--Sobic003G178500 Sobic005G218000--Sobic007G076100 Sobic005G218000--Sobic001G341700 Sobic005G218000--Sobic002G312200 Sobic006G092300 Sobic006G092300 Sobic005G218000--Sobic006G092300 Sobic005G218000--Sobic004G318800 Sobic005G218000--Sobic006G079500 Sobic001G491400 Sobic001G491400 Sobic005G218000--Sobic001G491400 Sobic001G266100 Sobic001G266100 Sobic005G218000--Sobic001G266100 Sobic010G049600 Sobic010G049600 Sobic005G218000--Sobic010G049600 Sobic007G076100--Sobic004G318800 Sobic007G076100--Sobic005G218000 Sobic007G076100--Sobic001G341700 Sobic007G076100--Sobic006G079500 Sobic007G076100--Sobic003G178500 Sobic007G076100--Sobic006G092300 Sobic007G076100--Sobic002G312200 Sobic007G076100--Sobic006G089700 Sobic002G416400 Sobic002G416400 Sobic007G076100--Sobic002G416400 Sobic001G341700--Sobic007G076100 Sobic001G341700--Sobic004G318800 Sobic001G341700--Sobic005G218000 Sobic001G341700--Sobic006G079500 Sobic001G341700--Sobic006G092300 Sobic001G341700--Sobic006G089700 Sobic001G341700--Sobic002G312200 Sobic002G029700 Sobic002G029700 Sobic001G341700--Sobic002G029700 Sobic001G341700--Sobic003G178500 Sobic002G312200--Sobic005G218000 Sobic002G312200--Sobic007G076100 Sobic002G312200--Sobic001G341700 Sobic002G312200--Sobic004G318800 Sobic002G312200--Sobic006G089700 Sobic005G118700 Sobic005G118700 Sobic002G312200--Sobic005G118700 Sobic002G312200--Sobic006G092300 Sobic002G312300 Sobic002G312300 Sobic002G312200--Sobic002G312300 Sobic002G312200--Sobic003G178500 Sobic009G074900 Sobic009G074900 Sobic010G048200--Sobic009G074900 Sobic009G075000 Sobic009G075000 Sobic010G048200--Sobic009G075000 Sobic003G016000 Sobic003G016000 Sobic010G048200--Sobic003G016000 Sobic010G187400 Sobic010G187400 Sobic010G048200--Sobic010G187400 Sobic003G088200 Sobic003G088200 Sobic010G048200--Sobic003G088200 Sobic001G133200 Sobic001G133200 Sobic010G048200--Sobic001G133200 Sobic004G318800--Sobic007G076100 Sobic004G318800--Sobic006G079500 Sobic004G318800--Sobic001G341700 Sobic004G318800--Sobic006G092300 Sobic004G318800--Sobic005G218000 Sobic004G318800--Sobic006G089700 Sobic007G206000 Sobic007G206000 Sobic004G318800--Sobic007G206000 Sobic007G048500 Sobic007G048500 Sobic004G318800--Sobic007G048500 Sobic005G226500 Sobic005G226500 Sobic004G318800--Sobic005G226500 Sobic006G089700--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic006G089700--Sobic010G236000 Sobic006G089700--Sobic006G079500 Sobic004G202800 Sobic004G202800 Sobic006G089700--Sobic004G202800 Sobic003G271700 Sobic003G271700 Sobic006G089700--Sobic003G271700 Sobic002G410600 Sobic002G410600 Sobic006G089700--Sobic002G410600 Sobic006G006800 Sobic006G006800 Sobic006G089700--Sobic006G006800 Sobic006G089700--Sobic004G318800 Sobic003G038700 Sobic003G038700 Sobic006G089700--Sobic003G038700 Sobic006G079500--Sobic005G226500 Sobic006G079500--Sobic007G048500 Sobic006G079500--Sobic003G016000 Sobic006G079500--Sobic007G206000 Sobic006G079500--Sobic003G088200 Sobic007G098600 Sobic007G098600 Sobic006G079500--Sobic007G098600 Sobic006G006900 Sobic006G006900 Sobic006G079500--Sobic006G006900 Sobic002G427550 Sobic002G427550 Sobic006G079500--Sobic002G427550 Sobic006G079500--Sobic001G133200 Sobic003G178500--Sobic007G076100 Sobic003G178500--Sobic002G416400 Sobic003G178500--Sobic005G218000 Sobic010G166300 Sobic010G166300 Sobic003G178500--Sobic010G166300 Sobic003G178500--Sobic004G318800 Sobic003G178500--Sobic001G341700 Sobic009G023900 Sobic009G023900 Sobic003G178500--Sobic009G023900 Sobic003G027100 Sobic003G027100 Sobic003G178500--Sobic003G027100 Sobic004G211700 Sobic004G211700 Sobic003G178500--Sobic004G211700
Octagon: transcription factors


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