Gene annotation
Transcriptome id Sobic.006G270500.2,Sobic.006G270500.1,Sobic.006G270500.4,Sobic.006G270500.3
Synonym Sb06g033200
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1B6PP74 , A0A1Z5RGU3 , A0A1B6PP54 , A0A1B6PP68
Pfam PF00657
Panther DB PTHR14209 PTHR14209:SF8
NCBI CDD KOG3035; Isoamyl acetate-hydrolyzing esterase
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT3G11210 : SGNH hydrolase-type esterase superfamily protein
RAP-DB (Rice) LOC_Os11g48070.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a057399 , Zm00025a009262
Brachypodium KQK15472 , KQK23514 , KQK23515
Barley HORVU4Hr1G027030.1
Wheat TraesCS4A02G178800 , TraesCS4A02G178800 , TraesCS4A02G178800 , TraesCS4D02G133700 , TraesCS4B02G139000 , TraesCS4B02G139000 , TraesCS4D02G133700
Populus -


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cDNA sequences
Sobic.006G270500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G102200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
2 Sobic.003G298700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.007G087800 expressed protein K06085: SSX2IP, synovial sarcoma, X breakpoint 2 interacting protein
4 Sobic.009G175100 inactive receptor kinase At2g26730 precursor, putative, expressed -
5 Sobic.007G116800 BURP domain containing protein, expressed -
6 Sobic.006G193100 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
7 Sobic.001G286400 - -
8 Sobic.006G014400 pectate lyase precursor, putative, expressed K01728: pectate lyase
9 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
10 Sobic.003G031700 protein kinase family protein, putative, expressed -
11 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
12 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
13 Sobic.004G283800 dehydration response related protein, putative, expressed -
14 Sobic.002G404300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
15 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
16 Sobic.003G307200 expressed protein -
17 Sobic.007G180200 NC domain-containing protein, putative, expressed -
18 Sobic.002G335900 cyclin, putative, expressed K18812: cyclin D6, plant
19 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -
20 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein


Gene co-expression network
sample Sobic006G270500 Sobic006G270500 Sobic004G102200 Sobic004G102200 Sobic006G270500--Sobic004G102200 Sobic003G298700 Sobic003G298700 Sobic006G270500--Sobic003G298700 Sobic007G087800 Sobic007G087800 Sobic006G270500--Sobic007G087800 Sobic009G175100 Sobic009G175100 Sobic006G270500--Sobic009G175100 Sobic007G116800 Sobic007G116800 Sobic006G270500--Sobic007G116800 Sobic006G193100 Sobic006G193100 Sobic006G270500--Sobic006G193100 Sobic001G286400 Sobic001G286400 Sobic006G270500--Sobic001G286400 Sobic006G014400 Sobic006G014400 Sobic006G270500--Sobic006G014400 Sobic001G522300 Sobic001G522300 Sobic006G270500--Sobic001G522300 Sobic004G102200--Sobic003G298700 Sobic004G274600 Sobic004G274600 Sobic004G102200--Sobic004G274600 Sobic004G102200--Sobic006G270500 Sobic007G165800 Sobic007G165800 Sobic004G102200--Sobic007G165800 Sobic001G199400 Sobic001G199400 Sobic004G102200--Sobic001G199400 Sobic008G008100 Sobic008G008100 Sobic004G102200--Sobic008G008100 Sobic002G186800 Sobic002G186800 Sobic004G102200--Sobic002G186800 Sobic004G102200--Sobic009G175100 Sobic003G070600 Sobic003G070600 Sobic004G102200--Sobic003G070600 Sobic003G298700--Sobic004G102200 Sobic003G298700--Sobic004G274600 Sobic004G211700 Sobic004G211700 Sobic003G298700--Sobic004G211700 Sobic010G014700 Sobic010G014700 Sobic003G298700--Sobic010G014700 Sobic002G363300 Sobic002G363300 Sobic003G298700--Sobic002G363300 Sobic002G312300 Sobic002G312300 Sobic003G298700--Sobic002G312300 Sobic003G298700--Sobic006G270500 Sobic003G027100 Sobic003G027100 Sobic003G298700--Sobic003G027100 Sobic003G298700--Sobic008G008100 Sobic007G087800--Sobic007G116800 Sobic010G092400 Sobic010G092400 Sobic007G087800--Sobic010G092400 Sobic004G246500 Sobic004G246500 Sobic007G087800--Sobic004G246500 Sobic002G074000 Sobic002G074000 Sobic007G087800--Sobic002G074000 Sobic003G031700 Sobic003G031700 Sobic007G087800--Sobic003G031700 Sobic001G493900 Sobic001G493900 Sobic007G087800--Sobic001G493900 Sobic010G129700 Sobic010G129700 Sobic007G087800--Sobic010G129700 Sobic004G267600 Sobic004G267600 Sobic007G087800--Sobic004G267600 Sobic007G087800--Sobic006G014400 Sobic007G063100 Sobic007G063100 Sobic009G175100--Sobic007G063100 Sobic009G175100--Sobic006G193100 Sobic005G055600 Sobic005G055600 Sobic009G175100--Sobic005G055600 Sobic001G026800 Sobic001G026800 Sobic009G175100--Sobic001G026800 Sobic009G175100--Sobic007G116800 Sobic009G175100--Sobic004G102200 Sobic004G328300 Sobic004G328300 Sobic009G175100--Sobic004G328300 Sobic001G285200 Sobic001G285200 Sobic009G175100--Sobic001G285200 Sobic009G175100--Sobic003G031700 Sobic007G116800--Sobic007G087800 Sobic007G116800--Sobic010G129700 Sobic007G116800--Sobic001G522300 Sobic003G260700 Sobic003G260700 Sobic007G116800--Sobic003G260700 Sobic002G313000 Sobic002G313000 Sobic007G116800--Sobic002G313000 Sobic007G116800--Sobic010G092400 Sobic008G114900 Sobic008G114900 Sobic007G116800--Sobic008G114900 Sobic009G184200 Sobic009G184200 Sobic007G116800--Sobic009G184200 Sobic004G257600 Sobic004G257600 Sobic007G116800--Sobic004G257600 Sobic006G193100--Sobic003G031700 Sobic001G008300 Sobic001G008300 Sobic006G193100--Sobic001G008300 Sobic009G202801 Sobic009G202801 Sobic006G193100--Sobic009G202801 Sobic003G315700 Sobic003G315700 Sobic006G193100--Sobic003G315700 Sobic006G193100--Sobic004G328300 Sobic008G148000 Sobic008G148000 Sobic006G193100--Sobic008G148000 Sobic002G319300 Sobic002G319300 Sobic006G193100--Sobic002G319300 Sobic009G136000 Sobic009G136000 Sobic006G193100--Sobic009G136000 Sobic002G204400 Sobic002G204400 Sobic006G193100--Sobic002G204400 Sobic001G286400--Sobic001G522300 Sobic010G014500 Sobic010G014500 Sobic001G286400--Sobic010G014500 Sobic001G074000 Sobic001G074000 Sobic001G286400--Sobic001G074000 Sobic001G286400--Sobic010G014700 Sobic001G286400--Sobic010G092400 Sobic009G129700 Sobic009G129700 Sobic001G286400--Sobic009G129700 Sobic001G286400--Sobic007G116800 Sobic001G286400--Sobic006G270500 Sobic002G222500 Sobic002G222500 Sobic001G286400--Sobic002G222500 Sobic010G247000 Sobic010G247000 Sobic006G014400--Sobic010G247000 Sobic006G014400--Sobic007G087800 Sobic002G430700 Sobic002G430700 Sobic006G014400--Sobic002G430700 Sobic010G231600 Sobic010G231600 Sobic006G014400--Sobic010G231600 Sobic006G014400--Sobic007G116800 Sobic006G163300 Sobic006G163300 Sobic006G014400--Sobic006G163300 Sobic010G077000 Sobic010G077000 Sobic006G014400--Sobic010G077000 Sobic006G014400--Sobic010G092400 Sobic006G014400--Sobic006G270500 Sobic001G522300--Sobic001G074000 Sobic001G522300--Sobic007G116800 Sobic001G522300--Sobic001G493900 Sobic001G522300--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G522300--Sobic002G362700 Sobic001G522300--Sobic001G286400 Sobic009G235700 Sobic009G235700 Sobic001G522300--Sobic009G235700 Sobic001G522300--Sobic009G129700 Sobic004G283800 Sobic004G283800 Sobic001G522300--Sobic004G283800
Octagon: transcription factors


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