Gene annotation
Transcriptome id Sobic.002G335900.1,Sobic.002G335900.3,Sobic.002G335900.4
Synonym 1, Sb02g036130, CYCD6
Functional annotation cyclin, putative, expressed
UniProt C5XBH5 , A0A1W0W6Y9 , A0A1W0W6N2
Pfam PF02984 PF00134
Panther DB PTHR10177 PTHR10177:SF188
NCBI CDD -
KEGG Orthology K18812; cyclin D6, plant
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT4G03270 : Cyclin D6;1
RAP-DB (Rice) LOC_Os07g37010.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a048354
Brachypodium KQK15809 , KQK15808
Barley HORVU0Hr1G003280.11 , HORVU0Hr1G003280.10 , HORVU0Hr1G003280.13 , HORVU0Hr1G003280.12 , HORVU0Hr1G003280.5 , HORVU0Hr1G003280.4 , HORVU0Hr1G003280.7 , HORVU0Hr1G003280.6 , HORVU0Hr1G003280.1 , HORVU0Hr1G003280.3 , HORVU0Hr1G003280.2 , HORVU0Hr1G003280.9 , HORVU0Hr1G003280.8
Wheat TraesCS2D02G215000 , TraesCS2A02G208300 , TraesCS2D02G215000 , TraesCS2B02G234800 , TraesCS2B02G234800 , TraesCS2B02G234800 , TraesCS2B02G234800 , TraesCS2D02G215000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G337600 expressed protein -
2 Sobic.002G404300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
3 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
4 Sobic.001G493900 beta-galactosidase, putative, expressed -
5 Sobic.003G031700 protein kinase family protein, putative, expressed -
6 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
7 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
8 Sobic.001G155700 expansin precursor, putative, expressed -
9 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
11 Sobic.010G023400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
12 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
13 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
16 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
18 Sobic.004G211700 - -
19 Sobic.006G219500 remorin family protein, putative, expressed -
20 Sobic.008G008100 kelch repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G335900 Sobic002G335900 Sobic002G337600 Sobic002G337600 Sobic002G335900--Sobic002G337600 Sobic002G404300 Sobic002G404300 Sobic002G335900--Sobic002G404300 Sobic010G192500 Sobic010G192500 Sobic002G335900--Sobic010G192500 Sobic001G493900 Sobic001G493900 Sobic002G335900--Sobic001G493900 Sobic003G031700 Sobic003G031700 Sobic002G335900--Sobic003G031700 Sobic004G267600 Sobic004G267600 Sobic002G335900--Sobic004G267600 Sobic007G160300 Sobic007G160300 Sobic002G335900--Sobic007G160300 Sobic001G155700 Sobic001G155700 Sobic002G335900--Sobic001G155700 Sobic001G083500 Sobic001G083500 Sobic002G335900--Sobic001G083500 Sobic002G337600--Sobic010G192500 Sobic001G046400 Sobic001G046400 Sobic002G337600--Sobic001G046400 Sobic002G337600--Sobic002G335900 Sobic010G241100 Sobic010G241100 Sobic002G337600--Sobic010G241100 Sobic007G211200 Sobic007G211200 Sobic002G337600--Sobic007G211200 Sobic002G032500 Sobic002G032500 Sobic002G337600--Sobic002G032500 Sobic003G089300 Sobic003G089300 Sobic002G337600--Sobic003G089300 Sobic004G211700 Sobic004G211700 Sobic002G337600--Sobic004G211700 Sobic001G473500 Sobic001G473500 Sobic002G337600--Sobic001G473500 Sobic002G404300--Sobic002G335900 Sobic002G404300--Sobic002G032500 Sobic002G404300--Sobic002G337600 Sobic002G186800 Sobic002G186800 Sobic002G404300--Sobic002G186800 Sobic001G026800 Sobic001G026800 Sobic002G404300--Sobic001G026800 Sobic004G342000 Sobic004G342000 Sobic002G404300--Sobic004G342000 Sobic002G404300--Sobic004G211700 Sobic003G300400 Sobic003G300400 Sobic002G404300--Sobic003G300400 Sobic004G274600 Sobic004G274600 Sobic002G404300--Sobic004G274600 Sobic009G060800 Sobic009G060800 Sobic010G192500--Sobic009G060800 Sobic010G192500--Sobic003G089300 Sobic010G192500--Sobic002G337600 Sobic003G366000 Sobic003G366000 Sobic010G192500--Sobic003G366000 Sobic010G192500--Sobic010G241100 Sobic010G192500--Sobic001G155700 Sobic010G192500--Sobic001G493900 Sobic002G319300 Sobic002G319300 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic001G493900--Sobic004G267600 Sobic003G019900 Sobic003G019900 Sobic001G493900--Sobic003G019900 Sobic010G129700 Sobic010G129700 Sobic001G493900--Sobic010G129700 Sobic001G493900--Sobic002G319300 Sobic008G114900 Sobic008G114900 Sobic001G493900--Sobic008G114900 Sobic001G493900--Sobic001G155700 Sobic001G493900--Sobic010G192500 Sobic002G417000 Sobic002G417000 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700 Sobic002G362700 Sobic002G362700 Sobic003G031700--Sobic002G362700 Sobic002G320600 Sobic002G320600 Sobic003G031700--Sobic002G320600 Sobic006G193100 Sobic006G193100 Sobic003G031700--Sobic006G193100 Sobic001G074100 Sobic001G074100 Sobic003G031700--Sobic001G074100 Sobic009G202801 Sobic009G202801 Sobic003G031700--Sobic009G202801 Sobic001G522300 Sobic001G522300 Sobic003G031700--Sobic001G522300 Sobic001G008300 Sobic001G008300 Sobic003G031700--Sobic001G008300 Sobic010G211800 Sobic010G211800 Sobic003G031700--Sobic010G211800 Sobic007G087800 Sobic007G087800 Sobic003G031700--Sobic007G087800 Sobic004G267600--Sobic001G493900 Sobic002G284100 Sobic002G284100 Sobic004G267600--Sobic002G284100 Sobic004G267600--Sobic010G129700 Sobic006G142500 Sobic006G142500 Sobic004G267600--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic004G267600--Sobic002G027600 Sobic006G272800 Sobic006G272800 Sobic004G267600--Sobic006G272800 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic007G160300--Sobic003G089300 Sobic003G070600 Sobic003G070600 Sobic007G160300--Sobic003G070600 Sobic006G058000 Sobic006G058000 Sobic007G160300--Sobic006G058000 Sobic010G020600 Sobic010G020600 Sobic007G160300--Sobic010G020600 Sobic001G074000 Sobic001G074000 Sobic007G160300--Sobic001G074000 Sobic003G309400 Sobic003G309400 Sobic007G160300--Sobic003G309400 Sobic007G160300--Sobic001G155700 Sobic004G357000 Sobic004G357000 Sobic007G160300--Sobic004G357000 Sobic007G160300--Sobic001G493900 Sobic001G155700--Sobic002G319300 Sobic001G155700--Sobic008G114900 Sobic001G155700--Sobic001G493900 Sobic001G155700--Sobic010G192500 Sobic006G219500 Sobic006G219500 Sobic001G155700--Sobic006G219500 Sobic002G313000 Sobic002G313000 Sobic001G155700--Sobic002G313000 Sobic001G155700--Sobic003G089300 Sobic002G394500 Sobic002G394500 Sobic001G155700--Sobic002G394500 Sobic001G155700--Sobic007G160300 Sobic004G313200 Sobic004G313200 Sobic001G083500--Sobic004G313200 Sobic001G083500--Sobic002G335900 Sobic009G088700 Sobic009G088700 Sobic001G083500--Sobic009G088700 Sobic001G083500--Sobic002G337600 Sobic001G083500--Sobic001G074000 Sobic002G160800 Sobic002G160800 Sobic001G083500--Sobic002G160800 Sobic001G452900 Sobic001G452900 Sobic001G083500--Sobic001G452900 Sobic003G100700 Sobic003G100700 Sobic001G083500--Sobic003G100700 Sobic001G199400 Sobic001G199400 Sobic001G083500--Sobic001G199400
Octagon: transcription factors


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