Gene annotation
Transcriptome id Sobic.001G083500.1
Synonym AtENODL20, Sb01g007530, ENODL20
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5X069
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF56
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G27035 : early nodulin-like protein 20
RAP-DB (Rice) LOC_Os03g55120.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044873 , Zm00025a008229
Brachypodium KQK13096
Barley HORVU2Hr1G063510.1 , HORVU2Hr1G063510.2 , HORVU5Hr1G096540.1
Wheat TraesCS2B02G279700 , TraesCS2A02G262400 , TraesCS5A02G395600 , TraesCS5B02G400400 , TraesCS5D02G404900 , TraesCS2D02G261600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
2 Sobic.002G335900 cyclin, putative, expressed K18812: cyclin D6, plant
3 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
4 Sobic.002G337600 expressed protein -
5 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
6 Sobic.002G160800 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
8 Sobic.003G100700 serine/threonine-protein kinase, putative, expressed -
9 Sobic.001G199400 monocopper oxidase, putative, expressed -
10 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
11 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
12 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
13 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
14 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
15 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
16 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
17 Sobic.002G404300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
18 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
19 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
20 Sobic.001G140600 expressed protein -


Gene co-expression network
sample Sobic001G083500 Sobic001G083500 Sobic004G313200 Sobic004G313200 Sobic001G083500--Sobic004G313200 Sobic002G335900 Sobic002G335900 Sobic001G083500--Sobic002G335900 Sobic009G088700 Sobic009G088700 Sobic001G083500--Sobic009G088700 Sobic002G337600 Sobic002G337600 Sobic001G083500--Sobic002G337600 Sobic001G074000 Sobic001G074000 Sobic001G083500--Sobic001G074000 Sobic002G160800 Sobic002G160800 Sobic001G083500--Sobic002G160800 Sobic001G452900 Sobic001G452900 Sobic001G083500--Sobic001G452900 Sobic003G100700 Sobic003G100700 Sobic001G083500--Sobic003G100700 Sobic001G199400 Sobic001G199400 Sobic001G083500--Sobic001G199400 Sobic004G313200--Sobic001G083500 Sobic002G222500 Sobic002G222500 Sobic004G313200--Sobic002G222500 Sobic001G108100 Sobic001G108100 Sobic004G313200--Sobic001G108100 Sobic001G140600 Sobic001G140600 Sobic004G313200--Sobic001G140600 Sobic009G146700 Sobic009G146700 Sobic004G313200--Sobic009G146700 Sobic003G102000 Sobic003G102000 Sobic004G313200--Sobic003G102000 Sobic010G241100 Sobic010G241100 Sobic004G313200--Sobic010G241100 Sobic006G219500 Sobic006G219500 Sobic004G313200--Sobic006G219500 Sobic007G116800 Sobic007G116800 Sobic004G313200--Sobic007G116800 Sobic002G335900--Sobic002G337600 Sobic002G404300 Sobic002G404300 Sobic002G335900--Sobic002G404300 Sobic010G192500 Sobic010G192500 Sobic002G335900--Sobic010G192500 Sobic001G493900 Sobic001G493900 Sobic002G335900--Sobic001G493900 Sobic003G031700 Sobic003G031700 Sobic002G335900--Sobic003G031700 Sobic004G267600 Sobic004G267600 Sobic002G335900--Sobic004G267600 Sobic007G160300 Sobic007G160300 Sobic002G335900--Sobic007G160300 Sobic001G155700 Sobic001G155700 Sobic002G335900--Sobic001G155700 Sobic002G335900--Sobic001G083500 Sobic002G220700 Sobic002G220700 Sobic009G088700--Sobic002G220700 Sobic009G088700--Sobic001G083500 Sobic009G088700--Sobic003G100700 Sobic001G015700 Sobic001G015700 Sobic009G088700--Sobic001G015700 Sobic003G078400 Sobic003G078400 Sobic009G088700--Sobic003G078400 Sobic003G091550 Sobic003G091550 Sobic009G088700--Sobic003G091550 Sobic006G068200 Sobic006G068200 Sobic009G088700--Sobic006G068200 Sobic009G088700--Sobic004G313200 Sobic006G122300 Sobic006G122300 Sobic009G088700--Sobic006G122300 Sobic002G337600--Sobic010G192500 Sobic001G046400 Sobic001G046400 Sobic002G337600--Sobic001G046400 Sobic002G337600--Sobic002G335900 Sobic002G337600--Sobic010G241100 Sobic007G211200 Sobic007G211200 Sobic002G337600--Sobic007G211200 Sobic002G032500 Sobic002G032500 Sobic002G337600--Sobic002G032500 Sobic003G089300 Sobic003G089300 Sobic002G337600--Sobic003G089300 Sobic004G211700 Sobic004G211700 Sobic002G337600--Sobic004G211700 Sobic001G473500 Sobic001G473500 Sobic002G337600--Sobic001G473500 Sobic001G522300 Sobic001G522300 Sobic001G074000--Sobic001G522300 Sobic003G070600 Sobic003G070600 Sobic001G074000--Sobic003G070600 Sobic009G129700 Sobic009G129700 Sobic001G074000--Sobic009G129700 Sobic001G074000--Sobic007G160300 Sobic001G074000--Sobic001G199400 Sobic001G074000--Sobic001G493900 Sobic003G019900 Sobic003G019900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic010G020600 Sobic010G020600 Sobic001G074000--Sobic010G020600 Sobic004G093400 Sobic004G093400 Sobic002G160800--Sobic004G093400 Sobic003G338200 Sobic003G338200 Sobic002G160800--Sobic003G338200 Sobic002G160800--Sobic001G083500 Sobic002G315500 Sobic002G315500 Sobic002G160800--Sobic002G315500 Sobic002G160800--Sobic002G337600 Sobic002G160800--Sobic002G404300 Sobic002G160800--Sobic002G032500 Sobic002G160800--Sobic002G335900 Sobic009G005700 Sobic009G005700 Sobic002G160800--Sobic009G005700 Sobic010G086000 Sobic010G086000 Sobic001G452900--Sobic010G086000 Sobic001G452900--Sobic010G241100 Sobic004G108400 Sobic004G108400 Sobic001G452900--Sobic004G108400 Sobic001G452900--Sobic010G192500 Sobic006G142500 Sobic006G142500 Sobic001G452900--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic001G452900--Sobic003G032200 Sobic002G284100 Sobic002G284100 Sobic001G452900--Sobic002G284100 Sobic001G452900--Sobic004G267600 Sobic009G172950 Sobic009G172950 Sobic001G452900--Sobic009G172950 Sobic003G100700--Sobic001G074000 Sobic003G100700--Sobic004G267600 Sobic003G100700--Sobic009G088700 Sobic003G100700--Sobic002G284100 Sobic003G100700--Sobic001G083500 Sobic003G100700--Sobic002G335900 Sobic001G123100 Sobic001G123100 Sobic003G100700--Sobic001G123100 Sobic004G234500 Sobic004G234500 Sobic003G100700--Sobic004G234500 Sobic004G246500 Sobic004G246500 Sobic003G100700--Sobic004G246500 Sobic001G199400--Sobic010G014700 Sobic003G113500 Sobic003G113500 Sobic001G199400--Sobic003G113500 Sobic003G027100 Sobic003G027100 Sobic001G199400--Sobic003G027100 Sobic003G338700 Sobic003G338700 Sobic001G199400--Sobic003G338700 Sobic007G165800 Sobic007G165800 Sobic001G199400--Sobic007G165800 Sobic010G078700 Sobic010G078700 Sobic001G199400--Sobic010G078700 Sobic001G199400--Sobic003G070600 Sobic007G180200 Sobic007G180200 Sobic001G199400--Sobic007G180200 Sobic001G199400--Sobic001G074000
Octagon: transcription factors


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