Gene annotation
Transcriptome id Sobic.003G100700.1
Synonym
Functional annotation serine/threonine-protein kinase, putative, expressed
UniProt A0A1B6Q2E7
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF204
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G38560 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g02040.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a023767 , Zm00025a035433
Brachypodium KQK02342 , PNT72138
Barley HORVU3Hr1G000770.9 , HORVU3Hr1G000770.8 , HORVU3Hr1G000770.6 , HORVU3Hr1G000770.4 , HORVU3Hr1G000770.3 , HORVU3Hr1G000770.2 , HORVU3Hr1G000770.16 , HORVU3Hr1G000770.15 , HORVU3Hr1G000770.14 , HORVU3Hr1G000770.13 , HORVU3Hr1G000770.12 , HORVU3Hr1G000770.11 , HORVU3Hr1G000770.10
Wheat TraesCS3B02G008600 , TraesCS3B02G008600 , TraesCS1B02G001500 , TraesCS3A02G003900
Populus -


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cDNA sequences
Sobic.003G100700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
2 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
3 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
4 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
5 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.002G335900 cyclin, putative, expressed K18812: cyclin D6, plant
7 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
8 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.004G246500 ATMAP70 protein, putative, expressed -
10 Sobic.005G143100 expressed protein -
11 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
12 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
13 Sobic.006G142500 protein kinase, putative, expressed -
14 Sobic.007G116800 BURP domain containing protein, expressed -
15 Sobic.010G029000 expressed protein -
16 Sobic.001G493900 beta-galactosidase, putative, expressed -
17 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
18 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.009G129700 serine/threonine-protein kinase, putative, expressed -
20 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -


Gene co-expression network
sample Sobic003G100700 Sobic003G100700 Sobic001G074000 Sobic001G074000 Sobic003G100700--Sobic001G074000 Sobic004G267600 Sobic004G267600 Sobic003G100700--Sobic004G267600 Sobic009G088700 Sobic009G088700 Sobic003G100700--Sobic009G088700 Sobic002G284100 Sobic002G284100 Sobic003G100700--Sobic002G284100 Sobic001G083500 Sobic001G083500 Sobic003G100700--Sobic001G083500 Sobic002G335900 Sobic002G335900 Sobic003G100700--Sobic002G335900 Sobic001G123100 Sobic001G123100 Sobic003G100700--Sobic001G123100 Sobic004G234500 Sobic004G234500 Sobic003G100700--Sobic004G234500 Sobic004G246500 Sobic004G246500 Sobic003G100700--Sobic004G246500 Sobic001G522300 Sobic001G522300 Sobic001G074000--Sobic001G522300 Sobic003G070600 Sobic003G070600 Sobic001G074000--Sobic003G070600 Sobic009G129700 Sobic009G129700 Sobic001G074000--Sobic009G129700 Sobic007G160300 Sobic007G160300 Sobic001G074000--Sobic007G160300 Sobic001G199400 Sobic001G199400 Sobic001G074000--Sobic001G199400 Sobic001G493900 Sobic001G493900 Sobic001G074000--Sobic001G493900 Sobic003G019900 Sobic003G019900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic010G020600 Sobic010G020600 Sobic001G074000--Sobic010G020600 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic006G142500 Sobic006G142500 Sobic004G267600--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic004G267600--Sobic002G027600 Sobic006G272800 Sobic006G272800 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic002G220700 Sobic002G220700 Sobic009G088700--Sobic002G220700 Sobic009G088700--Sobic001G083500 Sobic009G088700--Sobic003G100700 Sobic001G015700 Sobic001G015700 Sobic009G088700--Sobic001G015700 Sobic003G078400 Sobic003G078400 Sobic009G088700--Sobic003G078400 Sobic003G091550 Sobic003G091550 Sobic009G088700--Sobic003G091550 Sobic006G068200 Sobic006G068200 Sobic009G088700--Sobic006G068200 Sobic004G313200 Sobic004G313200 Sobic009G088700--Sobic004G313200 Sobic006G122300 Sobic006G122300 Sobic009G088700--Sobic006G122300 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G284100--Sobic002G027600 Sobic001G369800 Sobic001G369800 Sobic002G284100--Sobic001G369800 Sobic002G284100--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic009G172950 Sobic009G172950 Sobic002G284100--Sobic009G172950 Sobic002G284100--Sobic006G142500 Sobic001G083500--Sobic004G313200 Sobic001G083500--Sobic002G335900 Sobic001G083500--Sobic009G088700 Sobic002G337600 Sobic002G337600 Sobic001G083500--Sobic002G337600 Sobic001G083500--Sobic001G074000 Sobic002G160800 Sobic002G160800 Sobic001G083500--Sobic002G160800 Sobic001G452900 Sobic001G452900 Sobic001G083500--Sobic001G452900 Sobic001G083500--Sobic003G100700 Sobic001G083500--Sobic001G199400 Sobic002G335900--Sobic002G337600 Sobic002G404300 Sobic002G404300 Sobic002G335900--Sobic002G404300 Sobic010G192500 Sobic010G192500 Sobic002G335900--Sobic010G192500 Sobic002G335900--Sobic001G493900 Sobic003G031700 Sobic003G031700 Sobic002G335900--Sobic003G031700 Sobic002G335900--Sobic004G267600 Sobic002G335900--Sobic007G160300 Sobic001G155700 Sobic001G155700 Sobic002G335900--Sobic001G155700 Sobic002G335900--Sobic001G083500 Sobic001G123100--Sobic002G284100 Sobic002G253900 Sobic002G253900 Sobic001G123100--Sobic002G253900 Sobic001G123100--Sobic001G369800 Sobic005G143100 Sobic005G143100 Sobic001G123100--Sobic005G143100 Sobic004G145300 Sobic004G145300 Sobic001G123100--Sobic004G145300 Sobic001G123300 Sobic001G123300 Sobic001G123100--Sobic001G123300 Sobic001G123100--Sobic001G540700 Sobic002G006100 Sobic002G006100 Sobic001G123100--Sobic002G006100 Sobic003G224700 Sobic003G224700 Sobic001G123100--Sobic003G224700 Sobic010G023400 Sobic010G023400 Sobic004G234500--Sobic010G023400 Sobic004G234500--Sobic006G142500 Sobic004G234500--Sobic010G086000 Sobic004G234500--Sobic004G246500 Sobic004G234500--Sobic004G267600 Sobic009G127800 Sobic009G127800 Sobic004G234500--Sobic009G127800 Sobic006G274200 Sobic006G274200 Sobic004G234500--Sobic006G274200 Sobic004G234500--Sobic002G027600 Sobic002G317700 Sobic002G317700 Sobic004G234500--Sobic002G317700 Sobic004G246500--Sobic010G129700 Sobic004G246500--Sobic001G493900 Sobic004G343700 Sobic004G343700 Sobic004G246500--Sobic004G343700 Sobic004G246500--Sobic004G234500 Sobic004G246500--Sobic004G267600 Sobic007G087800 Sobic007G087800 Sobic004G246500--Sobic007G087800 Sobic007G116800 Sobic007G116800 Sobic004G246500--Sobic007G116800 Sobic002G313000 Sobic002G313000 Sobic004G246500--Sobic002G313000 Sobic004G246500--Sobic005G062600
Octagon: transcription factors


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