Gene annotation
Transcriptome id Sobic.009G088700.2,Sobic.009G088700.1
Synonym Sb09g008170
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
cellulase, putative, expressed
UniProt A0A1Z5R1N4 , C5YVA0
Pfam PF00150
Panther DB PTHR10551 PTHR10551:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007015; actin filament organization GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds GO:0007015actin filament organization


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g15510.2 : cellulase, putative, expressed
MaizeGDB (Corn) Zm00025a037149
Brachypodium KQK06950
Barley HORVU1Hr1G000810.9 , HORVU1Hr1G000810.1 , HORVU1Hr1G000810.6 , HORVU1Hr1G000810.7 , HORVU5Hr1G012240.2 , HORVU5Hr1G012240.4 , HORVU5Hr1G012240.3 , HORVU5Hr1G012320.5 , HORVU5Hr1G012320.4 , HORVU5Hr1G012320.1 , HORVU5Hr1G012320.2 , HORVU1Hr1G000810.10
Wheat TraesCS1A02G093300 , TraesCS1D02G101900 , TraesCS1A02G010200 , TraesCS1D02G009100 , TraesCS5D02G064000 , TraesCS5D02G064000 , TraesCS5D02G064000 , TraesCS5A02G052600 , TraesCS1B02G043200 , TraesCS1B02G043200 , TraesCS1B02G121600 , TraesCS1B02G121600 , TraesCS1B02G121600 , TraesCS1B02G016400 , TraesCS1D02G024100
Populus -


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cDNA sequences
Sobic.009G088700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G220700 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659855)@expressed protein -
2 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G100700 serine/threonine-protein kinase, putative, expressed -
4 Sobic.001G015700 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.003G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase, putative, expressed -
6 Sobic.003G091550 - -
7 Sobic.006G068200 expressed protein -
8 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
9 Sobic.006G122300 glycosyl hydrolase family 5 protein, putative, expressed -
10 Sobic.003G347100 - -
11 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
12 Sobic.010G087600 heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
13 Sobic.004G215400 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
14 Sobic.010G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
15 Sobic.002G032100 - -
16 Sobic.002G027300 ZOS1-07 - C2H2 zinc finger protein, expressed -
17 Sobic.003G373900 universal stress protein domain containing protein, putative, expressed -
18 Sobic.001G271600 transferase family protein, putative, expressed -
19 Sobic.007G000500 HMG1/2, putative, expressed -
20 Sobic.001G108100 expressed protein -


Gene co-expression network
sample Sobic009G088700 Sobic009G088700 Sobic002G220700 Sobic002G220700 Sobic009G088700--Sobic002G220700 Sobic001G083500 Sobic001G083500 Sobic009G088700--Sobic001G083500 Sobic003G100700 Sobic003G100700 Sobic009G088700--Sobic003G100700 Sobic001G015700 Sobic001G015700 Sobic009G088700--Sobic001G015700 Sobic003G078400 Sobic003G078400 Sobic009G088700--Sobic003G078400 Sobic003G091550 Sobic003G091550 Sobic009G088700--Sobic003G091550 Sobic006G068200 Sobic006G068200 Sobic009G088700--Sobic006G068200 Sobic004G313200 Sobic004G313200 Sobic009G088700--Sobic004G313200 Sobic006G122300 Sobic006G122300 Sobic009G088700--Sobic006G122300 Sobic002G220700--Sobic009G088700 Sobic002G220700--Sobic003G091550 Sobic002G220700--Sobic001G015700 Sobic002G220700--Sobic006G122300 Sobic004G072900 Sobic004G072900 Sobic002G220700--Sobic004G072900 Sobic002G220700--Sobic003G078400 Sobic003G274000 Sobic003G274000 Sobic002G220700--Sobic003G274000 Sobic003G317700 Sobic003G317700 Sobic002G220700--Sobic003G317700 Sobic001G123300 Sobic001G123300 Sobic002G220700--Sobic001G123300 Sobic001G083500--Sobic004G313200 Sobic002G335900 Sobic002G335900 Sobic001G083500--Sobic002G335900 Sobic001G083500--Sobic009G088700 Sobic002G337600 Sobic002G337600 Sobic001G083500--Sobic002G337600 Sobic001G074000 Sobic001G074000 Sobic001G083500--Sobic001G074000 Sobic002G160800 Sobic002G160800 Sobic001G083500--Sobic002G160800 Sobic001G452900 Sobic001G452900 Sobic001G083500--Sobic001G452900 Sobic001G083500--Sobic003G100700 Sobic001G199400 Sobic001G199400 Sobic001G083500--Sobic001G199400 Sobic003G100700--Sobic001G074000 Sobic004G267600 Sobic004G267600 Sobic003G100700--Sobic004G267600 Sobic003G100700--Sobic009G088700 Sobic002G284100 Sobic002G284100 Sobic003G100700--Sobic002G284100 Sobic003G100700--Sobic001G083500 Sobic003G100700--Sobic002G335900 Sobic001G123100 Sobic001G123100 Sobic003G100700--Sobic001G123100 Sobic004G234500 Sobic004G234500 Sobic003G100700--Sobic004G234500 Sobic004G246500 Sobic004G246500 Sobic003G100700--Sobic004G246500 Sobic001G015700--Sobic006G122300 Sobic001G015700--Sobic003G078400 Sobic001G015700--Sobic002G220700 Sobic001G171200 Sobic001G171200 Sobic001G015700--Sobic001G171200 Sobic001G015700--Sobic009G088700 Sobic009G129700 Sobic009G129700 Sobic001G015700--Sobic009G129700 Sobic001G271600 Sobic001G271600 Sobic001G015700--Sobic001G271600 Sobic003G019900 Sobic003G019900 Sobic001G015700--Sobic003G019900 Sobic003G374100 Sobic003G374100 Sobic001G015700--Sobic003G374100 Sobic003G078400--Sobic001G015700 Sobic003G078400--Sobic006G122300 Sobic001G444500 Sobic001G444500 Sobic003G078400--Sobic001G444500 Sobic003G078400--Sobic009G088700 Sobic007G106300 Sobic007G106300 Sobic003G078400--Sobic007G106300 Sobic003G078400--Sobic002G220700 Sobic003G078400--Sobic009G129700 Sobic003G078400--Sobic001G083500 Sobic003G078400--Sobic003G100700 Sobic003G091550--Sobic002G220700 Sobic002G121900 Sobic002G121900 Sobic003G091550--Sobic002G121900 Sobic003G091550--Sobic003G274000 Sobic003G091550--Sobic009G088700 Sobic004G215500 Sobic004G215500 Sobic003G091550--Sobic004G215500 Sobic002G263000 Sobic002G263000 Sobic003G091550--Sobic002G263000 Sobic010G087700 Sobic010G087700 Sobic003G091550--Sobic010G087700 Sobic006G228000 Sobic006G228000 Sobic003G091550--Sobic006G228000 Sobic006G111100 Sobic006G111100 Sobic003G091550--Sobic006G111100 Sobic004G215400 Sobic004G215400 Sobic006G068200--Sobic004G215400 Sobic001G273200 Sobic001G273200 Sobic006G068200--Sobic001G273200 Sobic005G180000 Sobic005G180000 Sobic006G068200--Sobic005G180000 Sobic002G032100 Sobic002G032100 Sobic006G068200--Sobic002G032100 Sobic002G027300 Sobic002G027300 Sobic006G068200--Sobic002G027300 Sobic006G185600 Sobic006G185600 Sobic006G068200--Sobic006G185600 Sobic005G179800 Sobic005G179800 Sobic006G068200--Sobic005G179800 Sobic001G108100 Sobic001G108100 Sobic006G068200--Sobic001G108100 Sobic010G087600 Sobic010G087600 Sobic006G068200--Sobic010G087600 Sobic004G313200--Sobic001G083500 Sobic002G222500 Sobic002G222500 Sobic004G313200--Sobic002G222500 Sobic004G313200--Sobic001G108100 Sobic001G140600 Sobic001G140600 Sobic004G313200--Sobic001G140600 Sobic009G146700 Sobic009G146700 Sobic004G313200--Sobic009G146700 Sobic003G102000 Sobic003G102000 Sobic004G313200--Sobic003G102000 Sobic010G241100 Sobic010G241100 Sobic004G313200--Sobic010G241100 Sobic006G219500 Sobic006G219500 Sobic004G313200--Sobic006G219500 Sobic007G116800 Sobic007G116800 Sobic004G313200--Sobic007G116800 Sobic006G122300--Sobic001G015700 Sobic006G122300--Sobic003G078400 Sobic006G122300--Sobic002G220700 Sobic006G122300--Sobic009G088700 Sobic006G122300--Sobic007G106300 Sobic006G118800 Sobic006G118800 Sobic006G122300--Sobic006G118800 Sobic006G122300--Sobic001G171200 Sobic006G122300--Sobic001G083500 Sobic006G122300--Sobic001G444500
Octagon: transcription factors


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