Gene annotation
Transcriptome id Sobic.001G108100.1
Synonym Sb01g009650
Functional annotation expressed protein
UniProt C5WM35
Pfam -
Panther DB PTHR33622 PTHR33622:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g51470.1 : expressed protein
MaizeGDB (Corn) Zm00025a016906
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G215400 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
2 Sobic.006G185600 HOTHEAD precursor, putative, expressed K00108: betA, choline dehydrogenase
3 Sobic.006G068200 expressed protein -
4 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.010G087600 heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
6 Sobic.010G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
7 Sobic.005G118700 expressed protein -
8 Sobic.005G180000 OsMADS87 - MADS-box family gene with M-gamma type-box, expressed -
9 Sobic.005G179800 OsMADS87 - MADS-box family gene with M-gamma type-box, expressed -
10 Sobic.001G273200 transferase family protein, putative, expressed -
11 Sobic.001G199400 monocopper oxidase, putative, expressed -
12 Sobic.002G363300 - -
13 Sobic.010G014700 expressed protein -
14 Sobic.004G324500 expressed protein -
15 Sobic.008G008100 kelch repeat-containing protein, putative, expressed -
16 Sobic.001G320500 expressed protein -
17 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
18 Sobic.004G211700 - -
19 Sobic.003G356600 ATROPGEF7/ROPGEF7, putative, expressed -
20 Sobic.010G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein


Gene co-expression network
sample Sobic001G108100 Sobic001G108100 Sobic004G215400 Sobic004G215400 Sobic001G108100--Sobic004G215400 Sobic006G185600 Sobic006G185600 Sobic001G108100--Sobic006G185600 Sobic006G068200 Sobic006G068200 Sobic001G108100--Sobic006G068200 Sobic004G313200 Sobic004G313200 Sobic001G108100--Sobic004G313200 Sobic010G087600 Sobic010G087600 Sobic001G108100--Sobic010G087600 Sobic010G087700 Sobic010G087700 Sobic001G108100--Sobic010G087700 Sobic005G118700 Sobic005G118700 Sobic001G108100--Sobic005G118700 Sobic005G180000 Sobic005G180000 Sobic001G108100--Sobic005G180000 Sobic005G179800 Sobic005G179800 Sobic001G108100--Sobic005G179800 Sobic004G215400--Sobic006G068200 Sobic004G215400--Sobic010G087600 Sobic004G215400--Sobic005G180000 Sobic004G215400--Sobic006G185600 Sobic001G273200 Sobic001G273200 Sobic004G215400--Sobic001G273200 Sobic004G215400--Sobic005G179800 Sobic010G014700 Sobic010G014700 Sobic004G215400--Sobic010G014700 Sobic004G215400--Sobic001G108100 Sobic002G032100 Sobic002G032100 Sobic004G215400--Sobic002G032100 Sobic006G185600--Sobic005G179800 Sobic006G185600--Sobic005G180000 Sobic006G185600--Sobic005G118700 Sobic006G185600--Sobic001G273200 Sobic008G013400 Sobic008G013400 Sobic006G185600--Sobic008G013400 Sobic006G089700 Sobic006G089700 Sobic006G185600--Sobic006G089700 Sobic006G185600--Sobic004G215400 Sobic006G185600--Sobic006G068200 Sobic002G312200 Sobic002G312200 Sobic006G185600--Sobic002G312200 Sobic006G068200--Sobic004G215400 Sobic006G068200--Sobic001G273200 Sobic006G068200--Sobic005G180000 Sobic006G068200--Sobic002G032100 Sobic002G027300 Sobic002G027300 Sobic006G068200--Sobic002G027300 Sobic006G068200--Sobic006G185600 Sobic006G068200--Sobic005G179800 Sobic006G068200--Sobic001G108100 Sobic006G068200--Sobic010G087600 Sobic001G083500 Sobic001G083500 Sobic004G313200--Sobic001G083500 Sobic002G222500 Sobic002G222500 Sobic004G313200--Sobic002G222500 Sobic004G313200--Sobic001G108100 Sobic001G140600 Sobic001G140600 Sobic004G313200--Sobic001G140600 Sobic009G146700 Sobic009G146700 Sobic004G313200--Sobic009G146700 Sobic003G102000 Sobic003G102000 Sobic004G313200--Sobic003G102000 Sobic010G241100 Sobic010G241100 Sobic004G313200--Sobic010G241100 Sobic006G219500 Sobic006G219500 Sobic004G313200--Sobic006G219500 Sobic007G116800 Sobic007G116800 Sobic004G313200--Sobic007G116800 Sobic002G360600 Sobic002G360600 Sobic010G087600--Sobic002G360600 Sobic006G107500 Sobic006G107500 Sobic010G087600--Sobic006G107500 Sobic010G087600--Sobic004G215400 Sobic010G087600--Sobic010G087700 Sobic010G087600--Sobic009G146700 Sobic010G087600--Sobic010G014700 Sobic010G087600--Sobic006G068200 Sobic002G363300 Sobic002G363300 Sobic010G087600--Sobic002G363300 Sobic010G087600--Sobic001G108100 Sobic010G087700--Sobic010G087600 Sobic010G087700--Sobic001G108100 Sobic010G087700--Sobic002G360600 Sobic010G087700--Sobic004G215400 Sobic008G008100 Sobic008G008100 Sobic010G087700--Sobic008G008100 Sobic010G087700--Sobic006G107500 Sobic010G087700--Sobic006G068200 Sobic003G091550 Sobic003G091550 Sobic010G087700--Sobic003G091550 Sobic002G335900 Sobic002G335900 Sobic010G087700--Sobic002G335900 Sobic005G118700--Sobic006G089700 Sobic005G118700--Sobic006G185600 Sobic005G118700--Sobic005G179800 Sobic005G118700--Sobic008G013400 Sobic004G202800 Sobic004G202800 Sobic005G118700--Sobic004G202800 Sobic005G118700--Sobic002G312200 Sobic005G118700--Sobic005G180000 Sobic006G006800 Sobic006G006800 Sobic005G118700--Sobic006G006800 Sobic010G236000 Sobic010G236000 Sobic005G118700--Sobic010G236000 Sobic005G180000--Sobic005G179800 Sobic005G180000--Sobic006G185600 Sobic005G180000--Sobic001G273200 Sobic005G180000--Sobic005G118700 Sobic005G180000--Sobic004G215400 Sobic005G180000--Sobic006G068200 Sobic005G180000--Sobic008G013400 Sobic005G180000--Sobic006G089700 Sobic003G347100 Sobic003G347100 Sobic005G180000--Sobic003G347100 Sobic005G179800--Sobic005G180000 Sobic005G179800--Sobic006G185600 Sobic005G179800--Sobic001G273200 Sobic005G179800--Sobic005G118700 Sobic005G179800--Sobic008G013400 Sobic005G179800--Sobic006G089700 Sobic005G179800--Sobic004G215400 Sobic005G179800--Sobic006G068200 Sobic005G179800--Sobic004G202800
Octagon: transcription factors


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